Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan07g2230 | ATGGCAGCTTCTTCTGTTGGCTCCCCATCCCCTTGTGGAGCATGCAAGTTTCTGCGTCGAAAGTGTGTGCCTGATTGTATTTTTGCTCCTTACTTTTCCTCTGAACAAGGACCTGCAAGATTTGCCGCCATTCATAAGGTTTTTGGAGCTAGTAATGTCTCTAAGCTTCTCCTCCATGTCCCTGTTCCTCATCGCTCTGAAGCTGTTGTCACTATTTCCTATCAAGCTCAAGCTCGCATTCGTGACCCTGTTTATGGCTGTGTTGCTCATATTTTTGCTCTCCAACAACAGGTGGCATACTTGCAAACACAGTTGATGCAAGCAAAGGCTCAACTTGCACAAACCTTGATGGATTCAGGAGGAAACATGGAGATTCAATGGACAGGCAACTTCAATCTCCCCAATGGAATCCAAAATTTTCGAAATGATCAAACTCAAATGATGAACCCTGCTGCTGTTAATTCCCCTCAGAGCTCTCTGGAATCAGCTGCCAACAACGACGAAGCATTATTATTCATGAACTTTCAAGACAGCCAAAGCAGATCCCCAGAAGCACCTCAATTCCCTAGAAGAAGACCAGCTTCTTCTTCTTGTCATGCTGATGTTGGGGAGCTCCAAGCTTTGGCCCTCAGAATGATGAGAAACTAA | 648 | 45.22 | MAASSVGSPSPCGACKFLRRKCVPDCIFAPYFSSEQGPARFAAIHKVFGASNVSKLLLHVPVPHRSEAVVTISYQAQARIRDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTLMDSGGNMEIQWTGNFNLPNGIQNFRNDQTQMMNPAAVNSPQSSLESAANNDEALLFMNFQDSQSRSPEAPQFPRRRPASSSCHADVGELQALALRMMRN | 215 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 73746238 | 73747444 | - | Tan0008300.1 | Tan07g2230 | 759761 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan07g2230 | 215 | MobiDBLite | consensus disorder prediction | 178 | 199 | - | - | |
Tan07g2230 | 215 | Pfam | Lateral organ boundaries (LOB) domain | 11 | 109 | IPR004883 | - | |
Tan07g2230 | 215 | ProSiteProfiles | LOB domain profile. | 10 | 112 | IPR004883 | - | |
Tan07g2230 | 215 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 9 | 176 | - | GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g2154 | Tan-Chr6:71327896 | Tan07g2230 | Tan-Chr7:73746238 | 2.40E-42 | dispersed | |
Tan07g2230 | Tan-Chr7:73746238 | Tan10g1658 | Tan-Chr10:34729835 | 2.90E-39 | dispersed | |
Tan07g2229 | Tan-Chr7:73735870 | Tan07g2230 | Tan-Chr7:73746238 | 3.10E-37 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28048 | PF03195 | LOB | 2.30E-37 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan07g2230 | K13944 | - | csv:101214521 | 299.671 |