Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g2261 ATGGAAGAGGTTGAAGAAGCTAACAGAGCTGCCATAGAGAGCTGCCATGGAGTTCTGAATCTTCTGGCTCATCAACCTCCTCAAGACCAAGCTCAGTTGAGGAAATTAATGGTGGAAACTGGAGAAGCAGTTTTCAAGTTCAGAAAAGTGGTTTCTCTTTTGAATTCTGGTTTTGGTCATGCAAGAGTTAGAAGGCAAAACAAGATTCCTTCTCTCCCTTTGCCCCACAAAACCCTCTTGGATTGCCCAATTTACAGACCAGATCCTCCAAGCAAAAATTTTCACTCTTTTCAGCCTGGTTTGAATGGTAAAGTTTCATTTTTTATGGGAAACCCAGATTTGGAATTGGGTCAAAGTGATAAAAACTCCCTCCAAATTCCCAAACAAGCTCCATCTTTAAACTTCAGCTTCCCTCAGCAGCAGCAGCAACAACAACAACAACAACAGAGGATGTTGGCTCATCAGAAACAGATGAAACAACAAGCTGAGATGATGTTTCTTAGGAGTAACAGTGGGATGAATCTGAATTTTGATAGCTCTAACTGTACATTGACAATGTCATCAGCTAGATCTTTCATTTCTTCATTGAGTATGGATGGGAGCGTCGCCGACGGGAGCTCGTTCCATTTGATCGGACCGTCGTCGACGTCAGCTGACAACAAGAGGAAGTTTTCTGGAAGGGGAGATGAAGGGAGCTTGAAATGTGGAAGCACTGGCAAATGTCATTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGATCGATCAAGGTGCCTGCCATAAGTAACAAACTTGCAGATATCCCTTCTGATGATTATTCATGGAGGAAATATGGACAGAAGCCAATTAAGGGCTCCCCTCATCCTAGGGGTTACTACAAATGCAGCAGCATGAGAGGTTGTCCAGCAAGAAAGCACGTCGAGCGGTGCTTAGAAGAGCCATCGATGCTTATTGTAACGTACGAAGGAGAACATAATCACCCGAAAATGTCGACTCAATCTGCACACACTTAG 1011 43.62 MEEVEEANRAAIESCHGVLNLLAHQPPQDQAQLRKLMVETGEAVFKFRKVVSLLNSGFGHARVRRQNKIPSLPLPHKTLLDCPIYRPDPPSKNFHSFQPGLNGKVSFFMGNPDLELGQSDKNSLQIPKQAPSLNFSFPQQQQQQQQQQQRMLAHQKQMKQQAEMMFLRSNSGMNLNFDSSNCTLTMSSARSFISSLSMDGSVADGSSFHLIGPSSTSADNKRKFSGRGDEGSLKCGSTGKCHCSKKRKHRVKRSIKVPAISNKLADIPSDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPKMSTQSAHT 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 74010122 74012733 - Tan0020587.1 Tan07g2261 759792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g2261 336 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 332 IPR044810 GO:0003700(InterPro)
Tan07g2261 336 Pfam Plant zinc cluster domain 229 266 IPR018872 -
Tan07g2261 336 FunFam WRKY transcription factor 65 252 329 - -
Tan07g2261 336 SMART WRKY_cls 268 328 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan07g2261 336 Pfam WRKY DNA -binding domain 270 327 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan07g2261 336 Gene3D WRKY domain 252 328 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan07g2261 336 ProSiteProfiles WRKY domain profile. 263 329 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan07g2261 336 SUPERFAMILY WRKY DNA-binding domain 266 328 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g1058 Tan-Chr6:9693702 Tan07g2261 Tan-Chr7:74010122 8.70E-46 dispersed
Tan07g2261 Tan-Chr7:74010122 Tan09g1752 Tan-Chr9:69067801 5.40E-40 dispersed
Tan07g2261 Tan-Chr7:74010122 Tan07g2262 Tan-Chr7:74010122 8.30E-158 tandem
Tan06g1057 Tan-Chr6:9693702 Tan07g2261 Tan-Chr7:74010122 8.90E-99 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28053 PF03106 WRKY 2.60E-26 CL0274 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g2261 - - - 0.0