Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan07g2269 | ATGGCTGGTGATGGATTTGTAATCCCTGTGGAATCTCAGGCCGTTTCAGTGAAGAAGAAGAAAACGAAGAAGAAGAAGAATACTGTAATTTCCAGGAGCTGGGTTTCCTTGGACCATGAAGGAAAGAGTACGATTTTGGACGTGGATAAGTATGCGATTATGCAAAGGGTTCAGATTAATGCCAGAGATCTTCGGCTTCTCGATCCTCTGTTGTCGTATCCTTCCACTATCTTGGGCAGAGAAAGAGTGATTGTTCTCAACTTGGAGCACATCAAGTCAATTATCACTGCAGACGAGGTGCTGCTTAGAGATCCAATGGATGAAAATGTAGTTCCAATTGTTGAAGAACTGCAGAGACGGTTGCCTTCCACGAGCTCCATTTACCAAGGACAAGGTGAAGAAGAAGAGCCTTCTACGACCCAAAATGAGTTGGCTGAAAACGAATTTCCATTTGAGTTCCGTGCCTTAGAGGTTGCATTAGAAGCAATTTGTAGTTTTCTTGATGCACGCACAAGAGAACTAGAGACTGATACATATCCTGCTTTAGATGAACTGACCTCCAAGATTAGCAGTCGTAACTTAGACCGAGTGCGCAAACTGAAGAGTGCGATGACAAGGTTGACAAATCGGGTGCAAAAGGTTAGGGATGAACTTGAACAACTTCTGGATGATGATGATGACATGGCAGAACTTTACTTGTCACGAAAAGTAGCTGGCACCCCTGAAAGTGGCTGTGGGACTCCGATTTGGTTTCTTGCTTCTCCTAAAGACTATTCAAAGATGTCTAAAACAAGTAGAGCAAGTGCGATTACTATTCGAGGAGAGAATGATGTTGAGGAGCTAGAAATGCTACTCGAGGCTTATTTTATGCAAATTGAAGGAACATTAAACAAACTAATCACGTTGCGGGAGTACATCGATGACACAGAGGATTACATCAATATTCAGCTTGACAACCATAGGAATCAACTTATTCAGCTAGAACTCTTTTTGAGCTCTGGGACTGTTTGTTTGTCTATTTATTCTTTAGTGACTGCAATCTTTGGAATGAATATACCATATACCTGGAAGGAAGATCATGAACATGTATTCAAATGGGTGGTCATCCTGACAGGAATAGTTTGTGCAACCATTTACGTGTCGCTAAGCTCGTATGCTCGGTACAAAGGTCTCGTTGGATCTTGA | 1185 | 42.19 | MAGDGFVIPVESQAVSVKKKKTKKKKNTVISRSWVSLDHEGKSTILDVDKYAIMQRVQINARDLRLLDPLLSYPSTILGRERVIVLNLEHIKSIITADEVLLRDPMDENVVPIVEELQRRLPSTSSIYQGQGEEEEPSTTQNELAENEFPFEFRALEVALEAICSFLDARTRELETDTYPALDELTSKISSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDDDMAELYLSRKVAGTPESGCGTPIWFLASPKDYSKMSKTSRASAITIRGENDVEELEMLLEAYFMQIEGTLNKLITLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSIYSLVTAIFGMNIPYTWKEDHEHVFKWVVILTGIVCATIYVSLSSYARYKGLVGS | 394 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 74051858 | 74056601 | - | Tan0015846.1 | Tan07g2269 | 759800 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan07g2269 | 394 | CDD | Mrs2_Mfm1p-like | 34 | 391 | IPR039204 | - | |
| Tan07g2269 | 394 | Gene3D | Magnesium transport protein CorA, transmembrane region | 331 | 385 | - | - | |
| Tan07g2269 | 394 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 330 | 381 | IPR045863 | - | |
| Tan07g2269 | 394 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 17 | 391 | IPR039204 | GO:0015095(PANTHER)|GO:0015693(PANTHER) | |
| Tan07g2269 | 394 | Coils | Coil | 197 | 224 | - | - | |
| Tan07g2269 | 394 | Gene3D | Magnesium transport protein CorA, transmembrane region | 108 | 324 | - | - | |
| Tan07g2269 | 394 | Gene3D | - | 15 | 105 | - | - | |
| Tan07g2269 | 394 | Pfam | Magnesium transporter MRS2-like | 258 | 321 | - | - | |
| Tan07g2269 | 394 | Pfam | Magnesium transporter MRS2-like | 38 | 238 | - | - | |
| Tan07g2269 | 394 | FunFam | Magnesium transporter MRS2-1 | 20 | 105 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan04g2493 | Tan-Chr4:83806570 | Tan07g2269 | Tan-Chr7:74051858 | 9.60E-85 | dispersed | |
| Tan07g2269 | Tan-Chr7:74051858 | Tan07g2271 | Tan-Chr7:74051858 | 4.20E-177 | dispersed | |
| Tan07g2269 | Tan-Chr7:74051858 | Tan07g2270 | Tan-Chr7:74051858 | 5.50E-177 | tandem | |
| Tan06g2463 | Tan-Chr6:77240801 | Tan07g2269 | Tan-Chr7:74051858 | 8.80E-151 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan07g2269 | K16075 | - | csv:101220452 | 707.983 |