Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g2271 ATGGCTGGTGATGGATTTGTAATCCCTGTGGAATCTCAGGCCGTTTCAGTGAAGAAGAAGAAAACGAAGAAGAAGAAGAATACTGTAATTTCCAGGAGCTGGGTTTCCTTGGACCATGAAGGAAAGAGTACGATTTTGGACGTGGATAAGTATGCGATTATGCAAAGGGTTCAGATTAATGCCAGAGATCTTCGGCTTCTCGATCCTCTGTTGTCGTATCCTTCCACTATCTTGGGCAGAGAAAGAGTGATTGTTCTCAACTTGGAGCACATCAAGTCAATTATCACTGCAGACGAGGTGCTGCTTAGAGATCCAATGGATGAAAATGTAGTTCCAATTGTTGAAGAACTGCAGAGACGGTTGCCTTCCACGAGCTCCATTTACCAAGGACAAGGTGAAGAAGAAGAGCCTTCTACGACCCAAAATGAGTTGGCTGAAAACGAATTTCCATTTGAGTTCCGTGCCTTAGAGGTTGCATTAGAAGCAATTTGTAGTTTTCTTGATGCACGCACAAGAGAACTAGAGACTGATACATATCCTGCTTTAGATGAACTGACCTCCAAGATTAGCAGTCGTAACTTAGACCGAGTGCGCAAACTGAAGAGTGCGATGACAAGGTTGACAAATCGGGTGCAAAAGGTTAGGGATGAACTTGAACAACTTCTGGATGATGATGATGACATGGCAGAACTTTACTTGTCACGAAAAGTAGCTGGCACCCCTGAAAGTGGCTGTGGGACTCCGATTTGGTTTCTTGCTTCTCCTAAAGACTATTCAAAGATGTCTAAAACAAGTAGAGCAAGTGCGATTACTATTCGAGGAGAGAATGATGTTGAGGAGCTAGAAATGCTACTCGAGGCTTATTTTATGCAAATTGAAGGAACATTAAACAAACTAATCACGTTGCGGGAGTACATCGATGACACAGAGGATTACATCAATATTCAGCTTGACAACCATAGGAATCAACTTATTCAGGTACTCTTTTTAAAGCCTAATGATTTTTTCTTAAAAAAAATAAAATAA 1026 41.42 MAGDGFVIPVESQAVSVKKKKTKKKKNTVISRSWVSLDHEGKSTILDVDKYAIMQRVQINARDLRLLDPLLSYPSTILGRERVIVLNLEHIKSIITADEVLLRDPMDENVVPIVEELQRRLPSTSSIYQGQGEEEEPSTTQNELAENEFPFEFRALEVALEAICSFLDARTRELETDTYPALDELTSKISSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDDDMAELYLSRKVAGTPESGCGTPIWFLASPKDYSKMSKTSRASAITIRGENDVEELEMLLEAYFMQIEGTLNKLITLREYIDDTEDYINIQLDNHRNQLIQVLFLKPNDFFLKKIK 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 74051858 74056601 - Tan0015846.3 Tan07g2271 759802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g2271 341 CDD Mrs2_Mfm1p-like 34 326 IPR039204 -
Tan07g2271 341 FunFam Magnesium transporter MRS2-1 20 105 - -
Tan07g2271 341 Pfam Magnesium transporter MRS2-like 258 321 - -
Tan07g2271 341 Pfam Magnesium transporter MRS2-like 38 238 - -
Tan07g2271 341 Coils Coil 197 224 - -
Tan07g2271 341 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 17 327 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Tan07g2271 341 Gene3D Magnesium transport protein CorA, transmembrane region 108 324 - -
Tan07g2271 341 Gene3D - 15 105 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2463 Tan-Chr6:77240801 Tan07g2271 Tan-Chr7:74051858 8.00E-120 dispersed
Tan07g2269 Tan-Chr7:74051858 Tan07g2271 Tan-Chr7:74051858 4.20E-177 dispersed
Tan07g2270 Tan-Chr7:74051858 Tan07g2271 Tan-Chr7:74051858 3.50E-177 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g2271 K16075 - csv:101220452 573.548