Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan07g2292 ATGACTATCTCATCCAACAGATTACACAAAGGCTGCTGGCTTAAATACATACTTCCAGCAGATTTTGATGATGATTTCCATTTGGAAATTTTGAAAGAAGCACTGTTGAGAGCTATACAAGATATTGATAAAACATTTTCCAAGGAAGCACATAAAAATAATCTTGTTTCGGGCTCTACTGCTACTGTTATATTATTAGCAGATGCACAAATTTTGGTTGCAAACATTGGTGACTCGAAGGCTTTCTTGTGTTCTGAAAAATTTCAGTCACCTGCAGAGGCTAAAGCTACCTTTTTAAGGTTATACAAGCAAAAAAGATATAGCGGCGCCTCACGTGCAAGGGGTTATGGAAATTCTAGACCAGACTCATTTGATGGGCTGACACATTTTTATGTCAAAGAATTGACTAGGGATCATCATCCAGATAGAGAGGATGAAAGATCTAGGGTGGAGATTGCTGGGGGTCACGTTATTGATTGGGGTGGTGTACCTCGAGTAAATGGTCAGTTGGCTATAAGCAGAGCAATTGGTGATGTGTCTTTTAAAAGCTATGGGGTTATATCTGCACCAGAAGTGACTGACTGGCAACCTTTGTCTACCAACGATAGCTATTTGGTGGCTTCATCTGATGGCATTTTTGAGAAATTGAGCTCACAAGACGTGTGTGACTTGTTGTGGGAAATACACAATGATGGTGTGTCAAGTTCTGAACATTCTCCTTCATGCTCATACTCATTGGCGGATTGCATTGTTAGTACTGCCTTTGAAAGGGGCAGTATGGATAACATGGCTGCTATTGTGGTTCCTTTAAGACCTGCTATTTCTTCTCGGAGGTTTCAGGAGGGGAGCTTAGTTGCACAGAGAGACTTAAGTTTTCCCACATCTGGAATAGAAAAGCTTATTAAAGAGCACTCAGCCAAGGGCATCTCTTCCAATGCCGTGCAATTGGAGCATTCTCATCCAGTTATGTCCAAGTTCAAGAGATTATTAGTTGAAGGAAGACACAATAATCTGGGATGTTTTTATCTGTCTGAGAATCTGGATGAATACAAGGATTATGTGTTGAGAACTCTAAATGAAGAAGAAGAATATTTATGTGATCTACCCCACGCTCTTCCAGAGTCTGTTAATCAGCCGTATGGTGGATCTTTAAATGTGTACAATGACCAAAGCTTGTGCTTCCATCCTGGGATGATTGGAGCTAAAGATCAATGCTTTAATCCTGAAGGTTTTGCTAGTTTTATTGATTTGCTTGAATCAATTCCTTTTCACGATCCTGGTCCAGATTATCAACTATTTGAGCATTCACCACCTGTATTGAGGTATGTGTTAAAGAAAAGGTTTGGTCGGGGTTCCTATGGCGAAGTATGGCTGGCTTTTCATGGGAACTGCCAGGAAGCCTTTAGTCCAGTAGGAGAGAATGTTTATGATTCGTGCAACTCATCTTTTCGAGACGCCAATGTCAGAAACTGTAGCTACTCTTCAAATAGTTCTCAAGCATATTCTCTGGAAGATAACTTGTTCATCATGAAACGTGTAATGGTTGAAAGGGGTGCTGGAGTCTATTTGAGTGGCTTACGGGAGAAATATTTTGGTGAAATATTTTCGAATGCTTCTACACGCCTTGGAGATGTGTTATGGACTGGAACATCAAACTTTGTCTTTGAAGCGTGGGGATCTAAAGACTTATTGTTAAAGGATGAATTACTGAGTTATAAAGTAGGGGAAACAAGGCATTTTAAAAATATATTTCCGAATCAGGTTAGACCAAAGAGTGTTATCTATGAAGAAGGTTTAAATCATATTGTGAGATATGTAGAATCTTTTGAATCTCGGTCAAATGAAATATGGCTTGTATTTCATTACGAAGGCATATCCCTCTCAAAGCTCATATATTCTATTGAAGATGCTGATCAAGAAAAAGTTGAACAAAAAAATCACGTTCAAATTTTACGACCTTCTAAGTGGTGGCATTGGTTGAAAACAACAGAAGCAGGACAAGAGGCAATGAAAAATTTGATACGTCAGTTGTTGATGGCACTCAAGTCTTGTCATGACCGCAATATCACTCACAGGGATATTAAACCTGAGAACATGGTGATATGCTTTGAAGATCAGAATACTGGAAAATGCTTGAATGGAAGTCGAAGGGGGAACGAGAACTTCTCTACTAAAATGCGCATTATTGACTTTGGTAGTGCTATTGATGAATTCACAGTTAAGCATCTATATGGGTCTACTGGGCCTTCCAGAGCGGAACAGACTTATGATTATACACCTCCTGAAGCCTTGCTTAATTCAAGTTGGTATCAGGAGATGTCAACCGCAACTTTGAAGTACGATATGTGGAGCGTTGGTGTAGTGATGCTAGAATTGATCTTAGGATCACCCAATGTTTTTCTGGTAAGTGATTTAACCCGTGTTCTTTTGGACCAACATCTTCAGGGTTGGAATGAAAGCTTAAAGCAGCTAGCATACAAGCTTAGGTCGTTCATGGAGTTGTGCATTTTAATTCCTGGAAGTTCCTCAAAAAGTTATCACAAAAATGTTCATCAAGGAGGTTCACCAGCATCCTGGAAATGCTCTGAAGAAGTTTTTGCCCACCAAATAAAGAGTAGAGATCCTCTTAAACTAGGGTTTCCAAATGTTTGGGCTCTACGTTTGGTCCGCAATCTGCTACAATGGAATCCGGAGGACCGTTTAAATGTCGACGATGCTTTGCGACATCCTTATTTCCACCCTTCTCCGAAAGGAGGGTGA 2760 40.0 MTISSNRLHKGCWLKYILPADFDDDFHLEILKEALLRAIQDIDKTFSKEAHKNNLVSGSTATVILLADAQILVANIGDSKAFLCSEKFQSPAEAKATFLRLYKQKRYSGASRARGYGNSRPDSFDGLTHFYVKELTRDHHPDREDERSRVEIAGGHVIDWGGVPRVNGQLAISRAIGDVSFKSYGVISAPEVTDWQPLSTNDSYLVASSDGIFEKLSSQDVCDLLWEIHNDGVSSSEHSPSCSYSLADCIVSTAFERGSMDNMAAIVVPLRPAISSRRFQEGSLVAQRDLSFPTSGIEKLIKEHSAKGISSNAVQLEHSHPVMSKFKRLLVEGRHNNLGCFYLSENLDEYKDYVLRTLNEEEEYLCDLPHALPESVNQPYGGSLNVYNDQSLCFHPGMIGAKDQCFNPEGFASFIDLLESIPFHDPGPDYQLFEHSPPVLRYVLKKRFGRGSYGEVWLAFHGNCQEAFSPVGENVYDSCNSSFRDANVRNCSYSSNSSQAYSLEDNLFIMKRVMVERGAGVYLSGLREKYFGEIFSNASTRLGDVLWTGTSNFVFEAWGSKDLLLKDELLSYKVGETRHFKNIFPNQVRPKSVIYEEGLNHIVRYVESFESRSNEIWLVFHYEGISLSKLIYSIEDADQEKVEQKNHVQILRPSKWWHWLKTTEAGQEAMKNLIRQLLMALKSCHDRNITHRDIKPENMVICFEDQNTGKCLNGSRRGNENFSTKMRIIDFGSAIDEFTVKHLYGSTGPSRAEQTYDYTPPEALLNSSWYQEMSTATLKYDMWSVGVVMLELILGSPNVFLVSDLTRVLLDQHLQGWNESLKQLAYKLRSFMELCILIPGSSSKSYHKNVHQGGSPASWKCSEEVFAHQIKSRDPLKLGFPNVWALRLVRNLLQWNPEDRLNVDDALRHPYFHPSPKGG 919
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 74184409 74235316 + Tan0003142.2 Tan07g2292 759823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan07g2292 919 CDD PP2Cc 5 270 IPR001932 -
Tan07g2292 919 SMART PP2C_4 5 268 IPR001932 -
Tan07g2292 919 PANTHER PROTEIN PHOSPHATASE 31 269 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan07g2292 919 Pfam Protein kinase domain 600 912 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g2292 919 Gene3D Transferase(Phosphotransferase) domain 1 645 913 - -
Tan07g2292 919 SUPERFAMILY PP2C-like 21 271 IPR036457 -
Tan07g2292 919 ProSiteProfiles PPM-type phosphatase domain profile. 1 270 IPR001932 -
Tan07g2292 919 Pfam Protein phosphatase 2C 133 263 IPR001932 -
Tan07g2292 919 Pfam Protein phosphatase 2C 31 86 IPR001932 -
Tan07g2292 919 SUPERFAMILY Protein kinase-like (PK-like) 441 914 IPR011009 -
Tan07g2292 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 689 701 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan07g2292 919 Gene3D - 9 275 IPR036457 -
Tan07g2292 919 ProSiteProfiles Protein kinase domain profile. 442 912 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan07g2292 919 SMART serkin_6 442 912 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan07g2292 Tan-Chr7:74184409 Tan11g0034 Tan-Chr11:639107 7.90E-17 dispersed
Tan07g2291 Tan-Chr7:74184409 Tan07g2292 Tan-Chr7:74184409 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67894 PF00069 Pkinase 4.40E-26 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan07g2292 - - - 0.0