Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0013 ATGGCGGTGAAGAAGATGAAGTGGAGATCCATTTTCTCGAGCTGCTGCGAGGTGGATTCGCGGTCGGAGGCGATAAAAGTAGTAGCAGTGGCGAAGCCGAGTTCGTTCCAAAGGATTTCGAAACTGGATTTAAGTAATCCAAATTCCACTCTCTCTGAGGATCTTTCAATCTCTCTCGCCGGATCTGACATACACGCCTTCTCCCTCTCCGAGTTGAAGCTCATCTCTCAGAGCTTTTCTTCCTCAAACTTCCTTGGAGAAGGTGGCTTTGGTCCTGTCTACAAAGGCTTTATCGATGACAATCTCAGGCCCAGCTTGCGCCCTCAGCCCGTCGCTATTAAACTCCTCGATTTGGATGGCACCCAAGGCCACCGGGAGTGGCTGACGGAGGTTATTTTTCTCGGGCAACTTAAGCACGCCCACCTGGTGAAGCTGATTGGGTATTGCTGCGAAGACGAACACAGGCTGCTTGTCTATGAGTATATGCCCAGAGGAAGCTTGGAGAATCAACTTTTCAAAAAATATTCAATCCCATTGCCCTGGTCGACGAGAATGAAGATCGCTCTTGGAGCTGCAAAGGGTCTGGCCTTCCTCCACGAAGCAGATAAGCCAGTCATTTACCGAGATTTCAAGGCTTCGAACGTACTGCTTGATTCTGATTATACTGCGAAGCTGTCTGATTTCGGGCTGGCAAAAGACGGTCCAGAAGGAGATAACACACACGTCTCCACCCGAGTAATGGGCACGCATGGATATGCCGCGCCGGAGTATATAATGACCGGGCATTTGACGGCGATGAGCGATGTGTATAGCTTCGGAGTAGTGCTTTTGGAGCTGCTGACAGGGCGGAGGTCGGTGGAGAAGAGCAGCCGTAAGAGGCAGCAGAATTTGGCAGAGTGGGCGAGGCCGATGCTGAACGATCCAAGGAAGCTAAGCCGTATAATAGACCCGAGACTTGAAGGGCAATACTCGGAAATGGGAGCTCAAAAAGCAGCCTCATTGGCGTACCAGTGCTTGAGCCACCGCCCAAAGCAGAGACCCACCATGAGCGCCGTCGTCAAGATATTAGAGCCACTCAAGGATTTCGATGACATTTCTTCAGGCACATTCGTTTACACGGTTCGATCTCCACAAGAAACCGATAGGAAAGTGCACTGA 1158 50.86 MAVKKMKWRSIFSSCCEVDSRSEAIKVVAVAKPSSFQRISKLDLSNPNSTLSEDLSISLAGSDIHAFSLSELKLISQSFSSSNFLGEGGFGPVYKGFIDDNLRPSLRPQPVAIKLLDLDGTQGHREWLTEVIFLGQLKHAHLVKLIGYCCEDEHRLLVYEYMPRGSLENQLFKKYSIPLPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKASNVLLDSDYTAKLSDFGLAKDGPEGDNTHVSTRVMGTHGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVEKSSRKRQQNLAEWARPMLNDPRKLSRIIDPRLEGQYSEMGAQKAASLAYQCLSHRPKQRPTMSAVVKILEPLKDFDDISSGTFVYTVRSPQETDRKVH 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 412776 415178 - Tan0019964.1 Tan08g0013 759905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0013 385 ProSiteProfiles Protein kinase domain profile. 79 360 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0013 385 CDD STKc_IRAK 85 359 - -
Tan08g0013 385 Gene3D Phosphorylase Kinase; domain 1 43 161 - -
Tan08g0013 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0013 385 PANTHER OS01G0588500 PROTEIN-RELATED 55 360 IPR050823 -
Tan08g0013 385 SUPERFAMILY Protein kinase-like (PK-like) 64 368 IPR011009 -
Tan08g0013 385 Gene3D Transferase(Phosphotransferase) domain 1 162 370 - -
Tan08g0013 385 FunFam Probable serine/threonine-protein kinase PBL8 162 375 - -
Tan08g0013 385 FunFam Serine/threonine-protein kinase BIK1 46 161 - -
Tan08g0013 385 Pfam Protein tyrosine and serine/threonine kinase 83 355 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3489 Tan-Chr1:100116911 Tan08g0013 Tan-Chr8:412776 1.30E-125 dispersed
Tan08g0013 Tan-Chr8:412776 Tan11g0532 Tan-Chr11:4619100 6.00E-112 dispersed
Tan01g1039 Tan-Chr1:10185578 Tan08g0013 Tan-Chr8:412776 4.70E-126 transposed
Tan08g2258 Tan-Chr8:74036737 Tan08g0013 Tan-Chr8:412776 2.50E-127 transposed
Tan09g1010 Tan-Chr9:62192749 Tan08g0013 Tan-Chr8:412776 1.60E-117 transposed
Tan06g0127 Tan-Chr6:1179314 Tan08g0013 Tan-Chr8:412776 2.50E-120 wgd
Tan08g0013 Tan-Chr8:412776 Tan09g1068 Tan-Chr9:62891162 1.90E-169 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67902 PF07714 PK_Tyr_Ser-Thr 1.90E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0013 - - - 0.0