Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan08g0099 | ATGAAGATCGTGGAATTGGAAGATGCTGGGACTGATCGGGAAGAAGAAATCGGTAGTGGTCAGATTGTGAAGGTCGATGCTAAGAGAGCCTTGGTTGGGGCTGGGGCCCGAATCTTGTTTTACCCTACCCTTTTATATAACGTGCTTCGGAATAAAATGGAGGCTGAATTCAGATGGTGGGACGAAGTCGATCAGTTTCTTTTGCTGGGTGCAGTGCCCTTCCCCAAAGACGTGCCGAGATTGAAGAAGCTCGGTGTTGGTGGCGTTATCACTCTCAATGAACCTTATGAAACATTAGTTCCATCTTCCTTGTATTATCGCCATGGAATTGACCACTTAAAGATCCCAACAAGAGATTATTGTTTTGCTCCTAAATTTTCTGATATTAGCCGAGCTGTGGACTTTATTCACAGAAATGTTTCGTGTGGTAAAACAACATACGTCCATTGTAAAGCAGGACGAGGAAGGAGCACGACCATTGTGCTTTGCTATTTGGTCAAATATAAGCACATGACCCCATCTGCTGCCCTGGAATATGTGCGCTCTAGAAGACCAAGGGTGTTGCTTGCCCCGTCGCAGTGGGAGGCTGTTCAAGAATACAGCAGCCGCCGACCCGTTACAAGTTCAAGCTCACCCTCAGGAGGAGATGCAGTGCTCATTACAAAAGACGATCTAGAAGGATATCACGGTACATGTATCGACAGTGCGGGTAGAGAACTTGCGGTTTTCCCTAGGATGGGCAAGTCAAAGCCAATGATAGCAAGGTTGTCCTGCCTCTTTTCCTCTTTGATAGTTCATGGCAGTAGTGGATCTCTCATTAAGCGATTGCCTGTGTCGGAGGCTCGTGCTTGTTGA | 855 | 46.9 | MKIVELEDAGTDREEEIGSGQIVKVDAKRALVGAGARILFYPTLLYNVLRNKMEAEFRWWDEVDQFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYYRHGIDHLKIPTRDYCFAPKFSDISRAVDFIHRNVSCGKTTYVHCKAGRGRSTTIVLCYLVKYKHMTPSAALEYVRSRRPRVLLAPSQWEAVQEYSSRRPVTSSSSPSGGDAVLITKDDLEGYHGTCIDSAGRELAVFPRMGKSKPMIARLSCLFSSLIVHGSSGSLIKRLPVSEARAC | 284 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 883249 | 886733 | - | Tan0004928.1 | Tan08g0099 | 759991 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan08g0099 | 284 | PANTHER | PHOSPHATIDYLINOSITOL PHOSPHATASE | 2 | 256 | - | - | |
Tan08g0099 | 284 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 127 | 195 | IPR000387 | GO:0016311(InterPro) | |
Tan08g0099 | 284 | CDD | PTPMT1 | 59 | 203 | IPR044596 | GO:0004721(InterPro) | |
Tan08g0099 | 284 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 59 | 206 | IPR020422 | GO:0006470(InterPro) | |
Tan08g0099 | 284 | Gene3D | Protein tyrosine phosphatase superfamily | 59 | 205 | IPR029021 | - | |
Tan08g0099 | 284 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 52 | 201 | IPR029021 | - | |
Tan08g0099 | 284 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 148 | 158 | IPR016130 | GO:0016311(InterPro) | |
Tan08g0099 | 284 | Pfam | Dual specificity phosphatase, catalytic domain | 99 | 201 | IPR000340 | GO:0016311(InterPro) | |
Tan08g0099 | 284 | SMART | dsp_5 | 62 | 203 | IPR020422 | GO:0006470(InterPro) | |
Tan08g0099 | 284 | FunFam | Dual specificity phosphatase domain protein | 59 | 206 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g2070 | Tan-Chr1:23677787 | Tan08g0099 | Tan-Chr8:883249 | 6.90E-80 | dispersed | |
Tan08g0099 | Tan-Chr8:883249 | Tan08g0101 | Tan-Chr8:883249 | 3.50E-165 | dispersed | |
Tan08g0099 | Tan-Chr8:883249 | Tan08g0100 | Tan-Chr8:883249 | 3.50E-165 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan08g0099 | - | - | - | 0.0 |