Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0099 ATGAAGATCGTGGAATTGGAAGATGCTGGGACTGATCGGGAAGAAGAAATCGGTAGTGGTCAGATTGTGAAGGTCGATGCTAAGAGAGCCTTGGTTGGGGCTGGGGCCCGAATCTTGTTTTACCCTACCCTTTTATATAACGTGCTTCGGAATAAAATGGAGGCTGAATTCAGATGGTGGGACGAAGTCGATCAGTTTCTTTTGCTGGGTGCAGTGCCCTTCCCCAAAGACGTGCCGAGATTGAAGAAGCTCGGTGTTGGTGGCGTTATCACTCTCAATGAACCTTATGAAACATTAGTTCCATCTTCCTTGTATTATCGCCATGGAATTGACCACTTAAAGATCCCAACAAGAGATTATTGTTTTGCTCCTAAATTTTCTGATATTAGCCGAGCTGTGGACTTTATTCACAGAAATGTTTCGTGTGGTAAAACAACATACGTCCATTGTAAAGCAGGACGAGGAAGGAGCACGACCATTGTGCTTTGCTATTTGGTCAAATATAAGCACATGACCCCATCTGCTGCCCTGGAATATGTGCGCTCTAGAAGACCAAGGGTGTTGCTTGCCCCGTCGCAGTGGGAGGCTGTTCAAGAATACAGCAGCCGCCGACCCGTTACAAGTTCAAGCTCACCCTCAGGAGGAGATGCAGTGCTCATTACAAAAGACGATCTAGAAGGATATCACGGTACATGTATCGACAGTGCGGGTAGAGAACTTGCGGTTTTCCCTAGGATGGGCAAGTCAAAGCCAATGATAGCAAGGTTGTCCTGCCTCTTTTCCTCTTTGATAGTTCATGGCAGTAGTGGATCTCTCATTAAGCGATTGCCTGTGTCGGAGGCTCGTGCTTGTTGA 855 46.9 MKIVELEDAGTDREEEIGSGQIVKVDAKRALVGAGARILFYPTLLYNVLRNKMEAEFRWWDEVDQFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYYRHGIDHLKIPTRDYCFAPKFSDISRAVDFIHRNVSCGKTTYVHCKAGRGRSTTIVLCYLVKYKHMTPSAALEYVRSRRPRVLLAPSQWEAVQEYSSRRPVTSSSSPSGGDAVLITKDDLEGYHGTCIDSAGRELAVFPRMGKSKPMIARLSCLFSSLIVHGSSGSLIKRLPVSEARAC 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 883249 886733 - Tan0004928.1 Tan08g0099 759991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0099 284 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 2 256 - -
Tan08g0099 284 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311(InterPro)
Tan08g0099 284 CDD PTPMT1 59 203 IPR044596 GO:0004721(InterPro)
Tan08g0099 284 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470(InterPro)
Tan08g0099 284 Gene3D Protein tyrosine phosphatase superfamily 59 205 IPR029021 -
Tan08g0099 284 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 52 201 IPR029021 -
Tan08g0099 284 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311(InterPro)
Tan08g0099 284 Pfam Dual specificity phosphatase, catalytic domain 99 201 IPR000340 GO:0016311(InterPro)
Tan08g0099 284 SMART dsp_5 62 203 IPR020422 GO:0006470(InterPro)
Tan08g0099 284 FunFam Dual specificity phosphatase domain protein 59 206 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2070 Tan-Chr1:23677787 Tan08g0099 Tan-Chr8:883249 6.90E-80 dispersed
Tan08g0099 Tan-Chr8:883249 Tan08g0101 Tan-Chr8:883249 3.50E-165 dispersed
Tan08g0099 Tan-Chr8:883249 Tan08g0100 Tan-Chr8:883249 3.50E-165 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0099 - - - 0.0