Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan08g0102 | ATGAAGATCGTGGAATTGGAAGATGCTGGGACTGATCGGGAAGAAGAAATCGGTAGTGGTCAGATTGTGAAGGTCGATGCTAAGAGAGCCTTGGTTGGGGCTGGGGCCCGAATCTTGTTTTACCCTACCCTTTTATATAACGTGCTTCGGAATAAAATGGAGGCTGAATTCAGATGGTGGGACGAAGTCGATCAGTTTCTTTTGCTGGGTGCAGTGCCCTTCCCCAAAGACGTGCCGAGATTGAAGAAGCTCGGTGTTGGTGGCGTTATCACTCTCAATGAACCTTATGAAACATTAGTTCCATCTTCCTTGTATTATCGCCATGGAATTGACCACTTAAAGATCCCAACAAGAGATTATTGTTTTGCTCCTAAATTTTCTGATATTAGCCGAGCTGTGGACTTTATTCACAGAAATGTTTCGTGTGGTAAAACAACATACGTCCATTGTAAAGCAGGACGAGGAAGGAGCACGACCATTGTGCTTTGCTATTTGGTCAAATATAAGCACATGACCCCATCTGCTGCCCTGGAATATGTGCGCTCTAGAAGACCAAGGGTGTTGCTTGCCCCGTCGCAGTGGGAGGTAAAAGAAATTACTCCTCAAACTTAA | 612 | 45.1 | MKIVELEDAGTDREEEIGSGQIVKVDAKRALVGAGARILFYPTLLYNVLRNKMEAEFRWWDEVDQFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYYRHGIDHLKIPTRDYCFAPKFSDISRAVDFIHRNVSCGKTTYVHCKAGRGRSTTIVLCYLVKYKHMTPSAALEYVRSRRPRVLLAPSQWEVKEITPQT | 203 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 883249 | 886733 | - | Tan0004928.4 | Tan08g0102 | 759994 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan08g0102 | 203 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 59 | 203 | IPR020422 | GO:0006470(InterPro) | |
Tan08g0102 | 203 | PANTHER | PHOSPHATIDYLINOSITOL PHOSPHATASE | 2 | 198 | - | - | |
Tan08g0102 | 203 | Pfam | Dual specificity phosphatase, catalytic domain | 99 | 194 | IPR000340 | GO:0016311(InterPro) | |
Tan08g0102 | 203 | CDD | PTPMT1 | 59 | 196 | IPR044596 | GO:0004721(InterPro) | |
Tan08g0102 | 203 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 127 | 195 | IPR000387 | GO:0016311(InterPro) | |
Tan08g0102 | 203 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 148 | 158 | IPR016130 | GO:0016311(InterPro) | |
Tan08g0102 | 203 | FunFam | Dual specificity phosphatase domain protein | 59 | 202 | - | - | |
Tan08g0102 | 203 | Gene3D | Protein tyrosine phosphatase superfamily | 59 | 201 | IPR029021 | - | |
Tan08g0102 | 203 | SMART | dsp_5 | 62 | 200 | IPR020422 | GO:0006470(InterPro) | |
Tan08g0102 | 203 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 52 | 195 | IPR029021 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan08g0100 | Tan-Chr8:883249 | Tan08g0102 | Tan-Chr8:883249 | 2.00E-112 | dispersed | |
Tan08g0101 | Tan-Chr8:883249 | Tan08g0102 | Tan-Chr8:883249 | 2.00E-112 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan08g0102 | - | - | - | 0.0 |