Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0102 ATGAAGATCGTGGAATTGGAAGATGCTGGGACTGATCGGGAAGAAGAAATCGGTAGTGGTCAGATTGTGAAGGTCGATGCTAAGAGAGCCTTGGTTGGGGCTGGGGCCCGAATCTTGTTTTACCCTACCCTTTTATATAACGTGCTTCGGAATAAAATGGAGGCTGAATTCAGATGGTGGGACGAAGTCGATCAGTTTCTTTTGCTGGGTGCAGTGCCCTTCCCCAAAGACGTGCCGAGATTGAAGAAGCTCGGTGTTGGTGGCGTTATCACTCTCAATGAACCTTATGAAACATTAGTTCCATCTTCCTTGTATTATCGCCATGGAATTGACCACTTAAAGATCCCAACAAGAGATTATTGTTTTGCTCCTAAATTTTCTGATATTAGCCGAGCTGTGGACTTTATTCACAGAAATGTTTCGTGTGGTAAAACAACATACGTCCATTGTAAAGCAGGACGAGGAAGGAGCACGACCATTGTGCTTTGCTATTTGGTCAAATATAAGCACATGACCCCATCTGCTGCCCTGGAATATGTGCGCTCTAGAAGACCAAGGGTGTTGCTTGCCCCGTCGCAGTGGGAGGTAAAAGAAATTACTCCTCAAACTTAA 612 45.1 MKIVELEDAGTDREEEIGSGQIVKVDAKRALVGAGARILFYPTLLYNVLRNKMEAEFRWWDEVDQFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYYRHGIDHLKIPTRDYCFAPKFSDISRAVDFIHRNVSCGKTTYVHCKAGRGRSTTIVLCYLVKYKHMTPSAALEYVRSRRPRVLLAPSQWEVKEITPQT 203
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 883249 886733 - Tan0004928.4 Tan08g0102 759994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0102 203 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 203 IPR020422 GO:0006470(InterPro)
Tan08g0102 203 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 2 198 - -
Tan08g0102 203 Pfam Dual specificity phosphatase, catalytic domain 99 194 IPR000340 GO:0016311(InterPro)
Tan08g0102 203 CDD PTPMT1 59 196 IPR044596 GO:0004721(InterPro)
Tan08g0102 203 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311(InterPro)
Tan08g0102 203 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311(InterPro)
Tan08g0102 203 FunFam Dual specificity phosphatase domain protein 59 202 - -
Tan08g0102 203 Gene3D Protein tyrosine phosphatase superfamily 59 201 IPR029021 -
Tan08g0102 203 SMART dsp_5 62 200 IPR020422 GO:0006470(InterPro)
Tan08g0102 203 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 52 195 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0100 Tan-Chr8:883249 Tan08g0102 Tan-Chr8:883249 2.00E-112 dispersed
Tan08g0101 Tan-Chr8:883249 Tan08g0102 Tan-Chr8:883249 2.00E-112 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0102 - - - 0.0