Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan08g0158 | ATGGATTCTCCACCGGCCAAGAGCTGGAGCATCCACACTCGGCCGGACATCATCCACAAGTACCAGATCCTCGAGCGGGTCGGATCCGGCGCATATTCCGATGTCCACCGTGCGCGGCGGCTCTCCGACGGCGTCATCGTCGCCTTGAAGGAGATCCACGATTATCAGTCGGCGTTCCGCGAAATCGAGGCGCTTCAAATCCTTCAAGGTTCGCCTAATATCGTCGTTCTGCATGAGTATTTTTGGCGCGAGGATGAGGATGCCGTGCTTGTTCTCGAGTTTCTGAGAACGGATTTGGCCACCGTTATAACGGAGGCGAAGAAGCGAGGATCGGACGGTGGAGAATCCGGGCGGGGGCTCGCGGTCGGGGAGGTGAAGCGGTGGATGATCCAGATTTTGAGTGGTCTCGATGCTTGTCATAGGAATATGATCGTGCATAGGGATTTGAAACCGAGCAATTTGTTGATCTCCGATGATGGCGTACTCAAGCTTGCCGATTTTGGACAGGCAAGAATTCTGATGGAGCCTGAATATGATGAATCCAATGAGATTTCACAACCACGTGAGATGAACTCTTCAGATCAAGTACCTGCTTCTCAGCCATCTGCAATTGTTTCAGGAACAGAAAGCTTGGTTCGAGAAGGTAACAGAACCGAAGATCAACAACCAATTAGCAAAGAGGAGTATTTTAGAGTTTTAGACGAGCTGAAAGCAAAAAATTCAGCAAATGAATTCGATAAGGAAACATATACATATGATGGCGATACATCTTGCTTAGCAACTTGTACCACGAGTGACCTTGAAGATGATCCATTTAAAGGTTCATCATATTCTTATGAAATGGAAGGGGGAGTTCCAGCAGATGATGGACAGGGTTCTCTCACTTCATGTGTTGGTACTCGCTGGTTCAGGGCCCCCGAATTACTCTATGGCTCTACAAACTACGGTTTGGAGATCGATTTGTGGTCATTGGGCTGCATTTTTGCAGAACTTTTTACATTGGAACCCCTTTTTCCAGGAACTGCTGACATTGATCAAATGAGCAGAATTTTCACTACCCTTGGCAACTTGACTGAAGATTCTTGGCCAGGTTGTTCCAAACTTCCTGATTTTCAAATCATATCATTCAACAACATAGAAAAGCCAATTGGCCTAGAAGCATGTCTTCCCAACTGTTCTCCTGATGAAATTTCTATAGTCAAAAGACTTCTTTGTTATGACCCGGCTAATCGAGCGACCGCTATGGAATTGCTACAAGACAAGTATTTCACTGATGAGCCACTTCCTGTTCCCTTGTCTGACCTTCATGTTCCTTCAATCAGAAGTCAACAGGATGAGGATTCTCCCGCAGGATGGTACAACGACAATGAGTCAGATTCCGATATGGATGAACTCGGCCCCTTGAATGTTACCACCAGTGCCACTGGTTACTCCATACAATTTGATTGA | 1449 | 46.65 | MDSPPAKSWSIHTRPDIIHKYQILERVGSGAYSDVHRARRLSDGVIVALKEIHDYQSAFREIEALQILQGSPNIVVLHEYFWREDEDAVLVLEFLRTDLATVITEAKKRGSDGGESGRGLAVGEVKRWMIQILSGLDACHRNMIVHRDLKPSNLLISDDGVLKLADFGQARILMEPEYDESNEISQPREMNSSDQVPASQPSAIVSGTESLVREGNRTEDQQPISKEEYFRVLDELKAKNSANEFDKETYTYDGDTSCLATCTTSDLEDDPFKGSSYSYEMEGGVPADDGQGSLTSCVGTRWFRAPELLYGSTNYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQMSRIFTTLGNLTEDSWPGCSKLPDFQIISFNNIEKPIGLEACLPNCSPDEISIVKRLLCYDPANRATAMELLQDKYFTDEPLPVPLSDLHVPSIRSQQDEDSPAGWYNDNESDSDMDELGPLNVTTSATGYSIQFD | 482 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 1347396 | 1350281 | + | Tan0009149.2 | Tan08g0158 | 760050 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan08g0158 | 482 | PANTHER | CELL DIVISION PROTEIN KINASE | 20 | 423 | IPR050108 | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0019912(PANTHER) | |
Tan08g0158 | 482 | SMART | serkin_6 | 21 | 423 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan08g0158 | 482 | Gene3D | Transferase(Phosphotransferase) domain 1 | 114 | 201 | - | - | |
Tan08g0158 | 482 | Gene3D | Transferase(Phosphotransferase) domain 1 | 272 | 435 | - | - | |
Tan08g0158 | 482 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 144 | 156 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan08g0158 | 482 | MobiDBLite | consensus disorder prediction | 185 | 201 | - | - | |
Tan08g0158 | 482 | MobiDBLite | consensus disorder prediction | 465 | 482 | - | - | |
Tan08g0158 | 482 | FunFam | Cyclin-dependent kinase F-1 | 12 | 106 | - | - | |
Tan08g0158 | 482 | MobiDBLite | consensus disorder prediction | 440 | 482 | - | - | |
Tan08g0158 | 482 | ProSitePatterns | Protein kinases ATP-binding region signature. | 27 | 50 | IPR017441 | GO:0005524(InterPro) | |
Tan08g0158 | 482 | Pfam | Protein kinase domain | 21 | 177 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan08g0158 | 482 | Pfam | Protein kinase domain | 292 | 423 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan08g0158 | 482 | Gene3D | Phosphorylase Kinase; domain 1 | 13 | 111 | - | - | |
Tan08g0158 | 482 | ProSiteProfiles | Protein kinase domain profile. | 21 | 423 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan08g0158 | 482 | MobiDBLite | consensus disorder prediction | 181 | 201 | - | - | |
Tan08g0158 | 482 | MobiDBLite | consensus disorder prediction | 440 | 455 | - | - | |
Tan08g0158 | 482 | SUPERFAMILY | Protein kinase-like (PK-like) | 8 | 442 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan08g0158 | Tan-Chr8:1347396 | Tan04g0087 | Tan-Chr4:630286 | 2.30E-36 | dispersed | |
Tan08g0157 | Tan-Chr8:1347396 | Tan08g0158 | Tan-Chr8:1347396 | 9.70E-285 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67910 | PF00069 | Pkinase | 1.80E-31 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan08g0158 | - | - | - | 0.0 |