Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0158 ATGGATTCTCCACCGGCCAAGAGCTGGAGCATCCACACTCGGCCGGACATCATCCACAAGTACCAGATCCTCGAGCGGGTCGGATCCGGCGCATATTCCGATGTCCACCGTGCGCGGCGGCTCTCCGACGGCGTCATCGTCGCCTTGAAGGAGATCCACGATTATCAGTCGGCGTTCCGCGAAATCGAGGCGCTTCAAATCCTTCAAGGTTCGCCTAATATCGTCGTTCTGCATGAGTATTTTTGGCGCGAGGATGAGGATGCCGTGCTTGTTCTCGAGTTTCTGAGAACGGATTTGGCCACCGTTATAACGGAGGCGAAGAAGCGAGGATCGGACGGTGGAGAATCCGGGCGGGGGCTCGCGGTCGGGGAGGTGAAGCGGTGGATGATCCAGATTTTGAGTGGTCTCGATGCTTGTCATAGGAATATGATCGTGCATAGGGATTTGAAACCGAGCAATTTGTTGATCTCCGATGATGGCGTACTCAAGCTTGCCGATTTTGGACAGGCAAGAATTCTGATGGAGCCTGAATATGATGAATCCAATGAGATTTCACAACCACGTGAGATGAACTCTTCAGATCAAGTACCTGCTTCTCAGCCATCTGCAATTGTTTCAGGAACAGAAAGCTTGGTTCGAGAAGGTAACAGAACCGAAGATCAACAACCAATTAGCAAAGAGGAGTATTTTAGAGTTTTAGACGAGCTGAAAGCAAAAAATTCAGCAAATGAATTCGATAAGGAAACATATACATATGATGGCGATACATCTTGCTTAGCAACTTGTACCACGAGTGACCTTGAAGATGATCCATTTAAAGGTTCATCATATTCTTATGAAATGGAAGGGGGAGTTCCAGCAGATGATGGACAGGGTTCTCTCACTTCATGTGTTGGTACTCGCTGGTTCAGGGCCCCCGAATTACTCTATGGCTCTACAAACTACGGTTTGGAGATCGATTTGTGGTCATTGGGCTGCATTTTTGCAGAACTTTTTACATTGGAACCCCTTTTTCCAGGAACTGCTGACATTGATCAAATGAGCAGAATTTTCACTACCCTTGGCAACTTGACTGAAGATTCTTGGCCAGGTTGTTCCAAACTTCCTGATTTTCAAATCATATCATTCAACAACATAGAAAAGCCAATTGGCCTAGAAGCATGTCTTCCCAACTGTTCTCCTGATGAAATTTCTATAGTCAAAAGACTTCTTTGTTATGACCCGGCTAATCGAGCGACCGCTATGGAATTGCTACAAGACAAGTATTTCACTGATGAGCCACTTCCTGTTCCCTTGTCTGACCTTCATGTTCCTTCAATCAGAAGTCAACAGGATGAGGATTCTCCCGCAGGATGGTACAACGACAATGAGTCAGATTCCGATATGGATGAACTCGGCCCCTTGAATGTTACCACCAGTGCCACTGGTTACTCCATACAATTTGATTGA 1449 46.65 MDSPPAKSWSIHTRPDIIHKYQILERVGSGAYSDVHRARRLSDGVIVALKEIHDYQSAFREIEALQILQGSPNIVVLHEYFWREDEDAVLVLEFLRTDLATVITEAKKRGSDGGESGRGLAVGEVKRWMIQILSGLDACHRNMIVHRDLKPSNLLISDDGVLKLADFGQARILMEPEYDESNEISQPREMNSSDQVPASQPSAIVSGTESLVREGNRTEDQQPISKEEYFRVLDELKAKNSANEFDKETYTYDGDTSCLATCTTSDLEDDPFKGSSYSYEMEGGVPADDGQGSLTSCVGTRWFRAPELLYGSTNYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQMSRIFTTLGNLTEDSWPGCSKLPDFQIISFNNIEKPIGLEACLPNCSPDEISIVKRLLCYDPANRATAMELLQDKYFTDEPLPVPLSDLHVPSIRSQQDEDSPAGWYNDNESDSDMDELGPLNVTTSATGYSIQFD 482
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1347396 1350281 + Tan0009149.2 Tan08g0158 760050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0158 482 PANTHER CELL DIVISION PROTEIN KINASE 20 423 IPR050108 GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0019912(PANTHER)
Tan08g0158 482 SMART serkin_6 21 423 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0158 482 Gene3D Transferase(Phosphotransferase) domain 1 114 201 - -
Tan08g0158 482 Gene3D Transferase(Phosphotransferase) domain 1 272 435 - -
Tan08g0158 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0158 482 MobiDBLite consensus disorder prediction 185 201 - -
Tan08g0158 482 MobiDBLite consensus disorder prediction 465 482 - -
Tan08g0158 482 FunFam Cyclin-dependent kinase F-1 12 106 - -
Tan08g0158 482 MobiDBLite consensus disorder prediction 440 482 - -
Tan08g0158 482 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524(InterPro)
Tan08g0158 482 Pfam Protein kinase domain 21 177 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0158 482 Pfam Protein kinase domain 292 423 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0158 482 Gene3D Phosphorylase Kinase; domain 1 13 111 - -
Tan08g0158 482 ProSiteProfiles Protein kinase domain profile. 21 423 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0158 482 MobiDBLite consensus disorder prediction 181 201 - -
Tan08g0158 482 MobiDBLite consensus disorder prediction 440 455 - -
Tan08g0158 482 SUPERFAMILY Protein kinase-like (PK-like) 8 442 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0158 Tan-Chr8:1347396 Tan04g0087 Tan-Chr4:630286 2.30E-36 dispersed
Tan08g0157 Tan-Chr8:1347396 Tan08g0158 Tan-Chr8:1347396 9.70E-285 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67910 PF00069 Pkinase 1.80E-31 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0158 - - - 0.0