Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0169 ATGTCAACCCCTACTCCGGCGCCGACGTCTCCTCCGGCGACCAATACGACGTCTCCCCCGCCGGCAACCCCCAGTGCTCCGCCGCCATCGACTCCATCGCAGCCGCCGCCGGCCGCTACACCTCCACCAACAACCACTCCGCCTTCCGCTGCAACCCCGCCCACTCCTTCCCGGCCTCCGCCGACCTCCGCCCCACCTCCGGCCACCCCGTCTCCGCCACCGCCGGTTACTCCCCAACCCGCCCCGCCCACTGACTCTCCCTCGCCGCCGGCTTCCTCTCCTCCGCCGTCTACGCCATCTACTCCCTCAATCTCTCCGCCGCCTCCGTCTTCTACTAGCCCTCCGTCTCCTCCGGCCGGTCGCAGTCCGCCTCCTCCGACTTCTCGTACGCCGTCCACTCCGTCAAGAAGTCCCCCGCCTCCATCAACTTCATCGCCATCGCCGCCGTCCTCCTCGTCCTCGTCTAATATTTCAACTGGACTTGTCGTCGGAATCGCAATTGGTGGAGTGATAATTGTTCTTTTGCTTAGTATACTGTGTCTTTGTTGCACGAAGAAGAGGAGAAGACGACGCGATGAAGAAGGATTCTATCCACACCCTCCGCCTGGACCAAAAGTTGATCCTTATGGTGGTCAGCAGCAATGGCAGCACAATGCTCCTCTGCCGCCCGATCCTGTAGTTGGAATGGTGCCTAAGCCATCTCCTCCTCCAGCAGTTGCATCCCGACCCCCGCACTCTCCAACTGGCGCTCGGCCTCCGCCTCCACAGCTCTACATGAGTAGTAGTGGAGGTTCAGGCTCTATGTATTCTGGGCCTGAAAATCCACTCCCTCCACCACCTCCGCCTCCTATGGCCTTTGGTTTCTCAAAGAGTACTTTTACTTATGAGGAATTGGCAATGGCAACGGATGGATTTTCAGATGCCAATCTCCTTGGACAAGGCGGATTCGGATATGTGCATAGAGGGGTACTTCCTAATGGAAAGGAGGTTGCAGTCAAGCAGTTGAAAGCTGGGAGCGGGCAGGGAGAACGAGAGTTTCAGGCCGAAGTCGATATTATCAGTCGAGTTCACCATAAACATCTTGTTTCTTTGGTCGGATATTGCATAACTGGGTCTCAAAGATTGCTTGTTTATGAATTTGTTCCAAACAATACCTTGGAGTTTCATTTACATGGTAAAGGGCGACCGACCATGGATTGGCAGACGAGACTTAGAATCGCTTTAGGATCTGCAAAAGGACTAGCTTATCTTCACGAAGATTGTCACCCAAAAATTATTCATCGCGATATTAAAGCCGCTAACATACTGTTGGACTTCAAGTTTGAAACAAAGGTTGCTGATTTTGGACTTGCAAAGTTTTCTTCTGATGTCAATACCCATGTATCGACTCGAGTGATGGGTACTTTCGGGTATCTTGCACCAGAGTATGCCTCAAGTGGCAAACTTACTGAGAAATCAGATGTTTTCTCCTTTGGGGTTATGCTTTTGGAGTTGATCACTGGTCGTCGACCAGTCGATACGAGTAATACTTTCATGGAAGATAGTCTTGTAGACTGGGCTAGGCCGTTATTGAACCGAGCTCTAGAAGATGGAAACTTTGATGCTTTGATCGATCCAAGGATTCAAAACAACTACAACCACAATGAAATGGCTCGTATGGTTGAGTGTGCTGCTGCCTGTGTGCGACATTCTGCAAGGCGTCGACCCCGAATGAGCCAGGTAGTGCGAGCACTCGAAGGAGACGCATCACTATCGGATCTCAACGAAGGAGTCAGACCCGGGCAGAGCACGATGTACAGTTCTCATGGAAGCTCAGACTATGACACCCATCAGTACAATGAGGACTTGAGGAAGTTCAGGAAGATGGCACTGGGAAGCACAGAGTATGGAGCGAGCAGCGAATACAGCGGACCAACGAGCGAGTACGGGCTGTACCCTTCGGGATCGAGCAGCGAAGGGCAAACCACCAGAGAAATGGAGATGAGAACAGTGAAGAAAGAGAGTGGAGGCATTGGTGGAAGCTCTTGA 2028 52.81 MSTPTPAPTSPPATNTTSPPPATPSAPPPSTPSQPPPAATPPPTTTPPSAATPPTPSRPPPTSAPPPATPSPPPPVTPQPAPPTDSPSPPASSPPPSTPSTPSISPPPPSSTSPPSPPAGRSPPPPTSRTPSTPSRSPPPPSTSSPSPPSSSSSSNISTGLVVGIAIGGVIIVLLLSILCLCCTKKRRRRRDEEGFYPHPPPGPKVDPYGGQQQWQHNAPLPPDPVVGMVPKPSPPPAVASRPPHSPTGARPPPPQLYMSSSGGSGSMYSGPENPLPPPPPPPMAFGFSKSTFTYEELAMATDGFSDANLLGQGGFGYVHRGVLPNGKEVAVKQLKAGSGQGEREFQAEVDIISRVHHKHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGKGRPTMDWQTRLRIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFETKVADFGLAKFSSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTSNTFMEDSLVDWARPLLNRALEDGNFDALIDPRIQNNYNHNEMARMVECAAACVRHSARRRPRMSQVVRALEGDASLSDLNEGVRPGQSTMYSSHGSSDYDTHQYNEDLRKFRKMALGSTEYGASSEYSGPTSEYGLYPSGSSSEGQTTREMEMRTVKKESGGIGGSS 675
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1416059 1419890 - Tan0018070.2 Tan08g0169 760061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0169 675 Pfam Protein tyrosine and serine/threonine kinase 310 578 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0169 675 FunFam proline-rich receptor-like protein kinase PERK1 283 380 - -
Tan08g0169 675 MobiDBLite consensus disorder prediction 629 657 - -
Tan08g0169 675 Gene3D Transferase(Phosphotransferase) domain 1 381 590 - -
Tan08g0169 675 MobiDBLite consensus disorder prediction 272 286 - -
Tan08g0169 675 MobiDBLite consensus disorder prediction 1 147 - -
Tan08g0169 675 Gene3D Phosphorylase Kinase; domain 1 284 380 - -
Tan08g0169 675 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524(InterPro)
Tan08g0169 675 MobiDBLite consensus disorder prediction 628 675 - -
Tan08g0169 675 ProSiteProfiles Protein kinase domain profile. 305 584 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0169 675 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 127 622 IPR047117 -
Tan08g0169 675 SMART serkin_6 305 541 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0169 675 MobiDBLite consensus disorder prediction 224 254 - -
Tan08g0169 675 MobiDBLite consensus disorder prediction 1 156 - -
Tan08g0169 675 MobiDBLite consensus disorder prediction 589 607 - -
Tan08g0169 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0169 675 FunFam Proline-rich receptor-like protein kinase PERK1 381 589 - -
Tan08g0169 675 PRINTS Proline rich extensin signature 24 41 - -
Tan08g0169 675 PRINTS Proline rich extensin signature 4 20 - -
Tan08g0169 675 PRINTS Proline rich extensin signature 49 74 - -
Tan08g0169 675 SUPERFAMILY Protein kinase-like (PK-like) 280 578 IPR011009 -
Tan08g0169 675 MobiDBLite consensus disorder prediction 585 609 - -
Tan08g0169 675 MobiDBLite consensus disorder prediction 189 288 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0167 Tan-Chr8:1415873 Tan08g0169 Tan-Chr8:1416059 4.80E-282 dispersed
Tan08g0169 Tan-Chr8:1416059 Tan09g1285 Tan-Chr9:65032981 3.10E-204 dispersed
Tan11g1209 Tan-Chr11:10028940 Tan08g0169 Tan-Chr8:1416059 1.00E-62 dispersed
Tan08g0168 Tan-Chr8:1415873 Tan08g0169 Tan-Chr8:1416059 5.70E-223 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67913 PF07714 PK_Tyr_Ser-Thr 5.40E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0169 - - - 0.0