Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan08g0179 | ATGAAGAGCGATATCCATTTCAACATTCATTTTTTGCTTCAAATTTTCCTCTTCTTTGGCACTCTTTTGTGCCTAGCTTCTTCTGAAGAGTTTCTTCAAGTTTCCGGCTATGGAGGCGGAGGCGGCGGTAGAGGACTGACCGACGCTGAAGCTCACTACATCCGTCAACGGCAACTTCTTTACTACAGAGACGAATTCGGCGACCGTGGTGAAGAAGTCACCGTCGATCCTAAGCTAGTTTTTGAAAACGACAGAATCAGAAATGCTTATATAGCATTACAAGCTTGGAAGCAAGCGATTCTCTCTGACCCTTTGAATCTCACTCGTAATTGGGTTGGATCTAATGTTTGCAGCTACAAAGGGGTTTTCTGTGCTCCGGCGCCGGATAATTCCTCGATCCGTACGGTCGCCGGAATCGACCTCAACCACGGCGACATTGCCGGTTACTTGCCGGAGGAGCTCGGCCTTCTTGTGGATCTTGCATTGTTCCATATCAACTCCAATCGGTTCTGCGGCACTGTTCCTCACAAGTTTAAGCACTTGAAGATGCTGTTCGAGTTGGATCTGAGCAACAATCGCTTCGCCGGAAAGTTCCCTCGGGTGGTTCTCGAGCTGCCGGAGCTGAAGTTTTTGGATCTGAGATTCAATGAGTTCGAAGGGACTGTTCCGAAGGAGCTTTTCGACAAGGATTTGGACGCCATTTTCATCAACCACAACAGATTCCGGTTTGACTTGCCCGAAAATTTCGGGAACTCGCCGGTTTCGGTGATTGTTCTTGCGAATAACAAATTTCACGGCTGTGTTCCGGGAAGTATTGGGAATATGACGAGGTTGAATGAGATTATTCTGATGAATAATGGGTTTCGATCGTGTTTGCCGGCGGAGATTGGGTTGCTGAAGAATCTGACGGTGTTTGATGTGAGCTATAATGAGTTTTTAGGGCCGTTGCCGGAGACGATTGGCGGAATGGTGAGCTTAGAGCAGCTGAATGTGGCGCATAATTTCTTGTCCGGGAAGATTCCGAATAGTATTTGTAAGTTGCCGAATCTGCAGAACTTTACTTATTCGTATAATTTCTTCACGGGAGAAGCGCCGTCGTGCTTGGCGTTGCCGGATTTTGATGACCGGAGGAACTGTCTACCGGACCGGCCGGCGCAGCGGTCGGAGAGGCAATCCTGTGGATTGCAGTTCTTTTGGATGTCCTTCTTATGTTGCTCCGTCGCCACCTGTGGTGGTGCCGTCTCCGCCACCTGTTGTTGTTCCATCTCCGCCGCCACCTGTTTACTCACCTCCGCCACCTGTTTCCGCTTCACACCCCATTTACCGACCACGTTCTCCTCCACCGCCGTCTCCCTCTCCCCCTCCCCCGCCTGTTTACTCTCCTCCCCCGCCCCCGCCTTCCCCACCGCCGCCTTCACCCCCACCGCCACCGCCGCCTGTCTACTCCCCACCCCACCTCCCCTTCTCCTCCCCCCGCCTTCTCCGCCACCGCCTTCCCCACCACCACCCCCACCCCCACCGCCGCCCCCACCAGTTTACTCTCCACCCCCACCCCCACCATCTCCACCGCCGCCCTCACCCCCACCGCCAGTTTACTCTCCACCCCACCTCCTCCTCCCTCACCTCCGCCGCCATCTCCTCCTCCCCCCAACACCGCCGCCACCAGCGCCGGTGTATTGTGTCCGACCTTCACCACCACCGCCACCACCAAACTCACCCCCACCACCTCCATTGTTCTCTCCACCCCCACCTGTTTACTACTACAATTCACCGCCACCGCCCAACTCTCCACCACCCCCACCAATGTACTCTCCTCCGCCACCGCCTCACTCACCTCCTCCTCCACCGCATTCACCACCACCGCCAATCTATCCTTACTTATCTCCCCCACCTCCTCCACCAGTCTATTCCCCACCTCCACCGGTCTATTCACCGCCACCACCACCGCCGTGTATAGAGCCTCCCCCACCACCCCCGCCGCCGTGTATAGAGTATCATGAACCCCCACCGCCACCATCCCCATCACCACCGCCGCCCATCCAGTACCTTCCTCCGCCGTCTCCTTCACCCCCACCTCCACCGCCGCCACCCACCCCAGTTTACTATTCACCTCCTCCGCCAGTTTATTACTCCCCACCACCACCGTCACCATCGCCGCCCCCGCCGGCATCCCCACCACCATCACCTGTATACGAAGGCCCATTGCCACCAATCTATGGAGTTTCGTACGCCTCTCCTCCACCTCCACCCTTCTATTGA | 2259 | 55.82 | MKSDIHFNIHFLLQIFLFFGTLLCLASSEEFLQVSGYGGGGGGRGLTDAEAHYIRQRQLLYYRDEFGDRGEEVTVDPKLVFENDRIRNAYIALQAWKQAILSDPLNLTRNWVGSNVCSYKGVFCAPAPDNSSIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFKHLKMLFELDLSNNRFAGKFPRVVLELPELKFLDLRFNEFEGTVPKELFDKDLDAIFINHNRFRFDLPENFGNSPVSVIVLANNKFHGCVPGSIGNMTRLNEIILMNNGFRSCLPAEIGLLKNLTVFDVSYNEFLGPLPETIGGMVSLEQLNVAHNFLSGKIPNSICKLPNLQNFTYSYNFFTGEAPSCLALPDFDDRRNCLPDRPAQRSERQSCGLQFFWMSFLCCSVATCGGAVSATCCCSISAATCLLTSATCFRFTPHLPTTFSSTAVSLSPSPACLLSSPAPAFPTAAFTPTATAACLLPTPPPLLLPPPSPPPPSPPPPPPPPPPPPVYSPPPPPPSPPPPSPPPPVYSPPHLLLPHLRRHLLLPPTPPPPAPVYCVRPSPPPPPPNSPPPPPLFSPPPPVYYYNSPPPPNSPPPPPMYSPPPPPHSPPPPPHSPPPPIYPYLSPPPPPPVYSPPPPVYSPPPPPPCIEPPPPPPPPCIEYHEPPPPPSPSPPPPIQYLPPPSPSPPPPPPPPTPVYYSPPPPVYYSPPPPSPSPPPPASPPPSPVYEGPLPPIYGVSYASPPPPPFY | 752 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 1557380 | 1559658 | + | Tan0018386.1 | Tan08g0179 | 760071 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan08g0179 | 752 | Gene3D | Ribonuclease Inhibitor | 252 | 380 | IPR032675 | - | |
Tan08g0179 | 752 | Gene3D | Ribonuclease Inhibitor | 89 | 251 | IPR032675 | - | |
Tan08g0179 | 752 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 29 | 672 | IPR051582 | - | |
Tan08g0179 | 752 | MobiDBLite | consensus disorder prediction | 594 | 617 | - | - | |
Tan08g0179 | 752 | MobiDBLite | consensus disorder prediction | 545 | 575 | - | - | |
Tan08g0179 | 752 | FunFam | Leucine-rich repeat extensin-like protein 1 | 90 | 251 | - | - | |
Tan08g0179 | 752 | Pfam | Leucine Rich Repeat | 325 | 347 | IPR001611 | GO:0005515(InterPro) | |
Tan08g0179 | 752 | Pfam | Leucine Rich Repeat | 301 | 323 | IPR001611 | GO:0005515(InterPro) | |
Tan08g0179 | 752 | Pfam | Leucine rich repeat N-terminal domain | 92 | 124 | IPR013210 | - | |
Tan08g0179 | 752 | MobiDBLite | consensus disorder prediction | 711 | 731 | - | - | |
Tan08g0179 | 752 | FunFam | Leucine-rich repeat extensin-like protein 5 | 252 | 391 | - | - | |
Tan08g0179 | 752 | SUPERFAMILY | L domain-like | 90 | 371 | - | - | |
Tan08g0179 | 752 | MobiDBLite | consensus disorder prediction | 546 | 575 | - | - | |
Tan08g0179 | 752 | Pfam | Leucine rich repeat | 162 | 217 | IPR001611 | GO:0005515(InterPro) | |
Tan08g0179 | 752 | MobiDBLite | consensus disorder prediction | 662 | 694 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g2003 | Tan-Chr6:64911250 | Tan08g0179 | Tan-Chr8:1557380 | 2.50E-37 | dispersed | |
Tan08g0103 | Tan-Chr8:895642 | Tan08g0179 | Tan-Chr8:1557380 | 1.30E-11 | dispersed | |
Tan08g0179 | Tan-Chr8:1557380 | Tan10g0798 | Tan-Chr10:6686244 | 1.00E-30 | dispersed | |
Tan08g0179 | Tan-Chr8:1557380 | Tan09g1311 | Tan-Chr9:65422738 | 2.90E-70 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan08g0179 | - | - | - | 0.0 |