Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0198 ATGGCTTCTGCAATTTCTCTTTGCTCTGTTTTTGTTCTTCTTGTTCTTGGTCTAACTCAGTGGGTCGACTCCGAGCCCACTCAGGATAAACAAGCCCTTCTCGATTTCCTCTCTAAAGCTCCTCACGCCAACCGGGTTCAATGGAACCCTTCTAATTCCGTCTGTAGTTGGATCGGCGTTGAGTGCGATTCGAATCAGTCGTTTGTTTATTCCCTCCGTTTGCCCGGCGTTGGCCTTGTCGGTCCGATTCCGGCCAACACGATCGGAAAATTGACTCAGCTCCGAGTTCTCAGCCTTCGCTCCAATCGTCTCTCTGGCGAGATCCCATCGGATTTTTCTAATTTGGTAATGCTGCGGAATCTGTATCTTCAGGATAATGCCTTCTCCGGCGAGTTTCCCCCGAGTTTGACTCGGTTGACTCGGCTGACTCGGCTGGATTTGTCGTCGAATAATTTCTCCGGTCCGATTTCGCCGGCTGTCGACAATCTGACCCACTTGAGTGGGATTTTCTTGCAGAACAATGGCTTCTCCGGTTCAATCCCGAGTATCTCGGCCATTAATTTAACAAACTTCAATGTCTCTAACAACAAACTCAACGGCTCGATTCCGAATTCGTTAGCAAAATTCCCAGCCTCTTCCTTCGCCGGAAATCTAGATCTCTGCGGCGGACCATTCCCCTCCTGCAACCCATCCACACCCTCTCCAGCTCCGTCGCAAAACCCACCGGCCGACGCCGGGGGAAAATCGAAGAAGCTCTCCACAGCCGCCATAATCGGGATCATCATCGGCGCCGTCTTCGCCGCGTTTCTCCTCCTCCTCATCCTGCTCCTCTGCATCCGGCGCCGCTCCCGCCAACAACAACCGGCGAAGCCACCAAAGGCATCGGCGGCAACAGCGACGGCGAGAGGGATTCCGGCAGCGGAGGCAGGGACGTCGTCGTCGAAAGACGACATTACCGGGGGGTCGGTGGAGGCGGCGGAGAGGAACAAGCTGGTGTTCTTCGAAGGAGGGATTTACAACTTCGATTTGGAGGATTTGTTGAGGGCTTCGGCGGAGGTGTTGGGAAAAGGGAGCGTCGGAACGTCGTACAAGGCGGTGCTGGAAGAAGGGACGACGGTGGTGGTGAAGCGGCTGAAGGATGTGGTGGTGACGAAGAAGGAATTCGAAACGCAAATGGAGGTTTTGGGGAAGATTAAACATGAAAATGTGGTTCCGCTTCGAGCTTTTTACTTCTCGAAAGATGAGAAACTGCTGGTTTATGATTACATTCCCACCGGAAGTTTGTCGGCGAGCCTTCACGGAAGCAGAGGCTCCGGCAGGACACCGCTGGACTGGGACTCAAGAATGAGAATAGCACTAAGCGCCGGCAAAGGACTTGCCCATCTCCATCTCGCCGGCAAGGTGGTTCACGGCAACATTAAATCCTCTAACATCCTTCTCCGACCAGACCACGACGCCTGCATCTCCGACTTCGGCCTCAACCCACTCTTCGGCACCGCCACGCCGCCGAACCGCGTTGCCGGCTACCGAGCGCCGGAGGTCCTCGAAACCCGAAAAGTCACCTTCAAATCCGACGTTTACAGCTACGGCGTCCTCCTCCTCGAGCTCTTGACCGGAAAAGCCCCCAACCAACAGTCCCTCGGCGAAGATGGCATCGACCTTCCCCGGTGGGTCCAGTCCGTCGTCCGGGAGGAATGGACGGCGGAGGTTTTCGACGCCGAACTGATGCGATTCCACAACATTGAAGAAGAGATGGTTCAGTTGCTTCAAATCGCAATGTCTTGCGTTTCGACCGTCCCCGATCAGCGGCCGGCGATGCCGGAAGTTGTACGGATGATCGAAGACATGAACAGAAGCGAGACCGACGACGGGTTGCGTCAGTCTTCCGATGACCCCTCGAAAGGCTCCGACGTCAACACGCCGCCGGCGGAATCGAGAACTCCGCCGAGAGTGACGCCGTAG 1962 55.45 MASAISLCSVFVLLVLGLTQWVDSEPTQDKQALLDFLSKAPHANRVQWNPSNSVCSWIGVECDSNQSFVYSLRLPGVGLVGPIPANTIGKLTQLRVLSLRSNRLSGEIPSDFSNLVMLRNLYLQDNAFSGEFPPSLTRLTRLTRLDLSSNNFSGPISPAVDNLTHLSGIFLQNNGFSGSIPSISAINLTNFNVSNNKLNGSIPNSLAKFPASSFAGNLDLCGGPFPSCNPSTPSPAPSQNPPADAGGKSKKLSTAAIIGIIIGAVFAAFLLLLILLLCIRRRSRQQQPAKPPKASAATATARGIPAAEAGTSSSKDDITGGSVEAAERNKLVFFEGGIYNFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFETQMEVLGKIKHENVVPLRAFYFSKDEKLLVYDYIPTGSLSASLHGSRGSGRTPLDWDSRMRIALSAGKGLAHLHLAGKVVHGNIKSSNILLRPDHDACISDFGLNPLFGTATPPNRVAGYRAPEVLETRKVTFKSDVYSYGVLLLELLTGKAPNQQSLGEDGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMSCVSTVPDQRPAMPEVVRMIEDMNRSETDDGLRQSSDDPSKGSDVNTPPAESRTPPRVTP 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1771376 1777398 + Tan0006354.1 Tan08g0198 760090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0198 653 FunFam pollen receptor-like kinase 1 318 422 - -
Tan08g0198 653 SUPERFAMILY Protein kinase-like (PK-like) 352 613 IPR011009 -
Tan08g0198 653 SUPERFAMILY L domain-like 48 211 - -
Tan08g0198 653 ProSiteProfiles Protein kinase domain profile. 348 616 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0198 653 MobiDBLite consensus disorder prediction 631 645 - -
Tan08g0198 653 PANTHER OS05G0588300 PROTEIN 9 623 IPR050994 -
Tan08g0198 653 Gene3D Phosphorylase Kinase; domain 1 316 422 - -
Tan08g0198 653 MobiDBLite consensus disorder prediction 615 630 - -
Tan08g0198 653 Pfam Leucine Rich Repeat 118 139 IPR001611 GO:0005515(InterPro)
Tan08g0198 653 Pfam Leucine Rich Repeat 187 208 IPR001611 GO:0005515(InterPro)
Tan08g0198 653 Pfam Leucine Rich Repeat 93 115 IPR001611 GO:0005515(InterPro)
Tan08g0198 653 Pfam Leucine Rich Repeat 141 163 IPR001611 GO:0005515(InterPro)
Tan08g0198 653 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 423 627 - -
Tan08g0198 653 CDD STKc_IRAK 354 616 - -
Tan08g0198 653 Gene3D Transferase(Phosphotransferase) domain 1 423 636 - -
Tan08g0198 653 MobiDBLite consensus disorder prediction 287 320 - -
Tan08g0198 653 FunFam Probable inactive receptor kinase RLK902 26 184 - -
Tan08g0198 653 Pfam Protein kinase domain 352 611 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0198 653 Gene3D Ribonuclease Inhibitor 26 184 IPR032675 -
Tan08g0198 653 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Tan08g0198 653 MobiDBLite consensus disorder prediction 615 653 - -
Tan08g0198 653 Gene3D Ribonuclease Inhibitor 185 232 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g0825 Tan-Chr4:7019190 Tan08g0198 Tan-Chr8:1771376 2.60E-102 dispersed
Tan04g1641 Tan-Chr4:32025416 Tan08g0198 Tan-Chr8:1771376 5.50E-81 dispersed
Tan04g1642 Tan-Chr4:32025416 Tan08g0198 Tan-Chr8:1771376 5.50E-81 dispersed
Tan05g0548 Tan-Chr5:3907605 Tan08g0198 Tan-Chr8:1771376 1.50E-144 dispersed
Tan05g0549 Tan-Chr5:3907822 Tan08g0198 Tan-Chr8:1771376 1.50E-144 dispersed
Tan07g0188 Tan-Chr7:4460464 Tan08g0198 Tan-Chr8:1771376 1.20E-31 dispersed
Tan07g1580 Tan-Chr7:66979630 Tan08g0198 Tan-Chr8:1771376 5.60E-131 dispersed
Tan08g0198 Tan-Chr8:1771376 Tan08g1788 Tan-Chr8:69872201 1.20E-91 dispersed
Tan08g2187 Tan-Chr8:73573738 Tan08g0198 Tan-Chr8:1771376 2.00E-25 dispersed
Tan01g0502 Tan-Chr1:4625147 Tan08g0198 Tan-Chr8:1771376 1.60E-69 transposed
Tan03g1568 Tan-Chr3:71923317 Tan08g0198 Tan-Chr8:1771376 4.70E-70 transposed
Tan04g1379 Tan-Chr4:15185544 Tan08g0198 Tan-Chr8:1771376 2.50E-73 transposed
Tan04g2049 Tan-Chr4:73851742 Tan08g0198 Tan-Chr8:1771376 8.90E-124 transposed
Tan05g2172 Tan-Chr5:72517349 Tan08g0198 Tan-Chr8:1771376 1.00E-127 transposed
Tan11g1423 Tan-Chr11:12810938 Tan08g0198 Tan-Chr8:1771376 2.00E-104 transposed
Tan08g0198 Tan-Chr8:1771376 Tan09g1335 Tan-Chr9:65636570 1.40E-214 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67914 PF00069 Pkinase 8.70E-37 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0198 - - - 0.0