Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan08g0220 | ATGGCCGCCATAGCCCGAGACGAGTCCGACTACGACAGCAGTTGCTCCTCCATCACCGTCCCAGACTCGAGCCGCAGCTGGATGAGCAACCTCAGCTTCGGGAGCCGGCGTCGGAGCAGCAGCTCCGGCGCCGACGCCGGAAGCTCTCCCCACAAACCCCACAAAGCAAACCAAGTAGCGTGGGAGGCGATGCGGTGGCTCCGGGGAGTGAAAGGGCGTGTGGGACTGGAGCACTTCCGACTGCTCCGGCGGCTGGGGAGCGGAGACATTGGGAATGTTTATCTGTGCGAAATAAGGAATCCGATGGTGGGTCTGGCGCAGTGCTTTTACGCAATGAAAGTGGTTGACAGAGAAGCGCTTTCAGTTAGGAATAAGGAGAGAAGAGCGGATATGGAGAAGGAGATTCTTAAAGTGATTGATCATCCATTTTTGCCCACGCTTTATGCAGAGTTTGAAGCTTCTCATTACTCGTGTTTGGTTATGGAGTTTTGTCCCGGTGGAGATTTGTATGCCGCTCGCCAACGCCTCCCCGGAAAACGATTCTCCATTTCTTCTGCTAAGTTTTATGCGGCGGAGATAATTTTAGGCCTAGAGTATTTGCACATGATGGGCATAGTTTACAGAGATTTGAAGCCGGAAAACGTGCTGGTTCGAGAAGACGGCCACATAATGCTGTCGGATTTCGATCTCTGCCTCAAATGCGACGTCGTTCCAAGGCTTATCCGCTGCAGAACCACCGCATCCGACGCCGCCGAACGCCACGTCAAAACCTACTCCACGTCATCAACCACCTCCTGCGCCGCCGCCCCAATCCAGCCTGTCCTCTCCTGTTTCTCCCTCGCCCGCCGCAGAAAATCCACCACCGTCACCACCATCACCGAACACGCAGCCGCCGCCGCTGCCGACGACGACGGCGACGGTGGCGAGTTCGACCCAGAGCCGGAATTAGTAGCGGAGCCGATCAACGCCCGGTCGAAATCCTTCGTGGGAACCCACGAGTATTTAGCGCCGGAGGTGATCTCCGGGCAGGGACACGGCAGCGCCGTCGATTGGTGGACGTTGGGAATTTTCCTATACGAAATGTTGTACGGAAAAACCCCATTTAAAGGGGAAAGTAACGAGAAAACCCTAATCAACATTTTGAAGCAGCCATTGGCGTTTCCAAGAATTGGGTTTAGTAATAGTAGCAAAGAGTATGAAGAAATGGTGAAAGTTGAAGATCTAATCAAGAAGCTTTTGGTGAAGAATCCCAAAAAGAGAATTGGAAGCTTTAAGGGTTCGGTTGAAATCAAAAGACATGAGTTTTTCAAAGGGGTAAATTGGGCTTTAATCCGCTCGGTTCGACCTCCCCAAATCCCCAACTCCGACCATCTACTTCACAACAATATTAATCCATCTAAATACTCTTCTAATTACTTACCTAAATTAAGCAAGAAGCAACGTGAACAACCCTATCAAATCCCTCCTCACCACTTTGATTACTTCTAA | 1488 | 51.48 | MAAIARDESDYDSSCSSITVPDSSRSWMSNLSFGSRRRSSSSGADAGSSPHKPHKANQVAWEAMRWLRGVKGRVGLEHFRLLRRLGSGDIGNVYLCEIRNPMVGLAQCFYAMKVVDREALSVRNKERRADMEKEILKVIDHPFLPTLYAEFEASHYSCLVMEFCPGGDLYAARQRLPGKRFSISSAKFYAAEIILGLEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLCLKCDVVPRLIRCRTTASDAAERHVKTYSTSSTTSCAAAPIQPVLSCFSLARRRKSTTVTTITEHAAAAAADDDGDGGEFDPEPELVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGIFLYEMLYGKTPFKGESNEKTLINILKQPLAFPRIGFSNSSKEYEEMVKVEDLIKKLLVKNPKKRIGSFKGSVEIKRHEFFKGVNWALIRSVRPPQIPNSDHLLHNNINPSKYSSNYLPKLSKKQREQPYQIPPHHFDYF | 495 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 1979177 | 1981793 | - | Tan0014868.1 | Tan08g0220 | 760112 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan08g0220 | 495 | ProSiteProfiles | Protein kinase domain profile. | 79 | 436 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan08g0220 | 495 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 205 | 217 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan08g0220 | 495 | FunFam | serine/threonine-protein kinase D6PK-like | 323 | 454 | - | - | |
Tan08g0220 | 495 | FunFam | protein kinase PINOID | 164 | 232 | - | - | |
Tan08g0220 | 495 | SMART | serkin_6 | 79 | 436 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan08g0220 | 495 | Gene3D | Phosphorylase Kinase; domain 1 | 77 | 163 | - | - | |
Tan08g0220 | 495 | MobiDBLite | consensus disorder prediction | 1 | 56 | - | - | |
Tan08g0220 | 495 | Gene3D | Transferase(Phosphotransferase) domain 1 | 164 | 233 | - | - | |
Tan08g0220 | 495 | Pfam | Protein kinase domain | 325 | 436 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan08g0220 | 495 | Pfam | Protein kinase domain | 80 | 233 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan08g0220 | 495 | CDD | STKc_phototropin_like | 78 | 453 | - | - | |
Tan08g0220 | 495 | FunFam | protein kinase PINOID 2 | 77 | 163 | - | - | |
Tan08g0220 | 495 | SUPERFAMILY | Protein kinase-like (PK-like) | 56 | 458 | IPR011009 | - | |
Tan08g0220 | 495 | MobiDBLite | consensus disorder prediction | 10 | 47 | - | - | |
Tan08g0220 | 495 | PANTHER | FLIPPASE KINASE 1-RELATED | 30 | 460 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Tan08g0220 | 495 | Gene3D | Transferase(Phosphotransferase) domain 1 | 323 | 454 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan05g1838 | Tan-Chr5:62340206 | Tan08g0220 | Tan-Chr8:1979177 | 3.50E-114 | dispersed | |
Tan05g2687 | Tan-Chr5:78551388 | Tan08g0220 | Tan-Chr8:1979177 | 4.60E-106 | dispersed | |
Tan08g0220 | Tan-Chr8:1979177 | Tan10g0017 | Tan-Chr10:455220 | 1.30E-111 | dispersed | |
Tan08g0220 | Tan-Chr8:1979177 | Tan03g2209 | Tan-Chr3:76562627 | 4.10E-113 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67915 | PF00069 | Pkinase | 5.40E-32 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan08g0220 | K08286 | - | csv:101202905 | 801.971 |