Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0273 ATGGACGAAAACGATAAGTGTGGCTGTTGGGCTGTCCTTAAACGCACCGTTTCGGATGCCTCCAAATCTTCTCCCTCTTCCAAACACTCCCCCAACTCCATTCCTCGTCTTACTTTGCTTTATGATTCAGCTACCGAGACGCGGCACCTAAACGCCAGCAACCGAGATTTTTGCCCTCCGGCCGAAGCTCGGCTATCCTTCGACAATGCTCCGCCGCCGCCGCCGCCGTTCGAGGAAAAATCGAAACGCCAGTTACTGAAATTTTCATTTCAGGAACTAAGATCGGCGACCGGAAATTTCCGACCGGATAGCATACTCGGAGAAGGAGGGTTTGGATTCGTCTTCAAGGGATGGATTGAAGAGAATGGCACCGCGCCGGCGAAACCTGGATCGGGAATTACAGTCGCCGTCAAAAGCTTGAAGCCGGATGGTCTTCAAGGTCACCGAGAATGGGAGGCTGAGGTTAGCTTTCTTGGACAGCTTCACCATCCCAATCTTGTTAAGCTTATTGGATACTGTATTGAAGATGATCAAAGGCTTCTTGTTTATGAATTTATGACGCGTGGTAGTCTTGAAAACCATCTTTTCAGAAGGACTATTCCTCTTCCATGGTCAAACAGGATTAAAATTGCACTTGCTGCAGCCAAAGGCTTGTCCTTTCTCCACAATGGTCCGGAACCTGTCATATATAGAGATTTCAAGACATCAAACATATTGCTTGATACCGAGTACAATGCGAAGCTTTCGGATTTTGGTTTGGCGAAGGCTGGGCCTCAGGGAGACAAAACACATGTTTCGACCAGAGTCGTTGGAACATATGGCTATGCTGCACCAGAATATCTAATGACGGGTCATTTGACGTCGAAGAGCGATGTCTATAGCTTTGGAGTTGTCCTACTCGAGATTCTAACGGGCAGGAGATCGATGGACAAGAAACGTCCAAGTGGTGAGCAAAATCTAGTGTCATGGGCTAGGCCATATTTAGATGACAAAAGGAAGCTTTACCATATAGTGGACCCTCGCTTGGAGCTAAACTACTCTATTCAAGGGGTTCAGAAAGTCTCTAAACTAGCTTCTCACTGCATCAGTAGAGATCCAAAATCTCGTCCCACCATGGATGAAGTTGTCAAGGTTCTCGTTCCGTTACAGGACCTTAACGACCTTGCGATCCTAGCCTATCATTCGCGCTTGTCGCAGCAAGGTCGACGAAAGAAGAAATCGGATGGACTGCACCAGCTAACATATACTCAGTCAAGAAATGTTAGAACCTCTCCTATGAATGTTGGAATCGTTCATCGTCGTCGATGA 1308 47.25 MDENDKCGCWAVLKRTVSDASKSSPSSKHSPNSIPRLTLLYDSATETRHLNASNRDFCPPAEARLSFDNAPPPPPPFEEKSKRQLLKFSFQELRSATGNFRPDSILGEGGFGFVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWEAEVSFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALAAAKGLSFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYLMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLDDKRKLYHIVDPRLELNYSIQGVQKVSKLASHCISRDPKSRPTMDEVVKVLVPLQDLNDLAILAYHSRLSQQGRRKKKSDGLHQLTYTQSRNVRTSPMNVGIVHRRR 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2506533 2516709 - Tan0006605.1 Tan08g0273 760165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0273 435 Gene3D Transferase(Phosphotransferase) domain 1 186 395 - -
Tan08g0273 435 SUPERFAMILY Protein kinase-like (PK-like) 84 383 IPR011009 -
Tan08g0273 435 FunFam Serine/threonine-protein kinase BIK1 76 185 - -
Tan08g0273 435 CDD STKc_IRAK 106 382 - -
Tan08g0273 435 ProSitePatterns Protein kinases ATP-binding region signature. 106 138 IPR017441 GO:0005524(InterPro)
Tan08g0273 435 Pfam Protein tyrosine and serine/threonine kinase 104 379 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0273 435 Gene3D Phosphorylase Kinase; domain 1 77 185 - -
Tan08g0273 435 ProSiteProfiles Protein kinase domain profile. 100 397 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0273 435 MobiDBLite consensus disorder prediction 61 80 - -
Tan08g0273 435 FunFam Probable serine/threonine-protein kinase PBL8 186 399 - -
Tan08g0273 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0273 435 PANTHER OS01G0588500 PROTEIN-RELATED 79 383 IPR050823 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0273 Tan-Chr8:2506533 Tan08g0277 Tan-Chr8:2506965 1.20E-252 dispersed
Tan08g0273 Tan-Chr8:2506533 Tan08g0274 Tan-Chr8:2506533 4.70E-246 tandem
Tan02g2747 Tan-Chr2:95739734 Tan08g0273 Tan-Chr8:2506533 3.50E-61 wgd
Tan08g0273 Tan-Chr8:2506533 Tan09g1442 Tan-Chr9:66439340 1.60E-198 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67916 PF07714 PK_Tyr_Ser-Thr 5.50E-49 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0273 - - - 0.0