Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0278 ATGAAGACGAACTCAAAAAGAAAAAAAAAAGTGGAGTTATTCAAATTACTCATTCATTCTCATTCCGCCGTTGCATTTGCAGCTACCGAGACGCGGCACCTAAACGCCAGCAACCGAGATTTTTGCCCTCCGGCCGAAGCTCGGCTATCCTTCGACAATGCTCCGCCGCCGCCGCCGCCGTTCGAGGAAAAATCGAAACGCCAGTTACTGAAATTTTCATTTCAGGAACTAAGATCGGCGACCGGAAATTTCCGACCGGATAGCATACTCGGAGAAGGAGGGTTTGGATTCGTCTTCAAGGGATGGATTGAAGAGAATGGCACCGCGCCGGCGAAACCTGGATCGGGAATTACAGTCGCCGTCAAAAGCTTGAAGCCGGATGGTCTTCAAGGTCACCGAGAATGGGAGGCTGAGGTTAGCTTTCTTGGACAGCTTCACCATCCCAATCTTGTTAAGCTTATTGGATACTGTATTGAAGATGATCAAAGGCTTCTTGTTTATGAATTTATGACGCGTGGTAGTCTTGAAAACCATCTTTTCAGAAGGACTATTCCTCTTCCATGGTCAAACAGGATTAAAATTGCACTTGCTGCAGCCAAAGGCTTGTCCTTTCTCCACAATGGTCCGGAACCTGTCATATATAGAGATTTCAAGACATCAAACATATTGCTTGATACCGAGTACAATGCGAAGCTTTCGGATTTTGGTTTGGCGAAGGCTGGGCCTCAGGGAGACAAAACACATGTTTCGACCAGAGTCGTTGGAACATATGGCTATGCTGCACCAGAATATCTAATGACGGGTCATTTGACGTCGAAGAGCGATGTCTATAGCTTTGGAGTTGTCCTACTCGAGATTCTAACGGGCAGGAGATCGATGGACAAGAAACGTCCAAGTGGTGAGCAAAATCTAGTGTCATGGGCTAGGCCATATTTAGATGACAAAAGGAAGCTTTACCATATAGTGGACCCTCGCTTGGAGCTAAACTACTCTATTCAAGGGGTTCAGAAAGTCTCTAAACTAGCTTCTCACTGCATCAGTAGAGATCCAAAATCTCGTCCCACCATGGATGAAGTTGTCAAGGTTCTCGTTCCGTTACAGGACCTTAACGACCTTGCGATCCTAGCCTATCATTCGCGCTTGTCGCAGCAAGGTCGACGAAAGAAGAAATCGGATGGACTGCACCAGCTAACATATACTCAGTCAAGAAATGTTAGAACCTCTCCTATGAATGTTGGAATCGTTCATCGTCGTCGATGA 1260 46.35 MKTNSKRKKKVELFKLLIHSHSAVAFAATETRHLNASNRDFCPPAEARLSFDNAPPPPPPFEEKSKRQLLKFSFQELRSATGNFRPDSILGEGGFGFVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWEAEVSFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALAAAKGLSFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYLMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLDDKRKLYHIVDPRLELNYSIQGVQKVSKLASHCISRDPKSRPTMDEVVKVLVPLQDLNDLAILAYHSRLSQQGRRKKKSDGLHQLTYTQSRNVRTSPMNVGIVHRRR 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2506965 2513307 - Tan0006605.6 Tan08g0278 760170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0278 419 Gene3D Transferase(Phosphotransferase) domain 1 170 379 - -
Tan08g0278 419 ProSitePatterns Protein kinases ATP-binding region signature. 90 122 IPR017441 GO:0005524(InterPro)
Tan08g0278 419 ProSiteProfiles Protein kinase domain profile. 84 381 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0278 419 SUPERFAMILY Protein kinase-like (PK-like) 68 367 IPR011009 -
Tan08g0278 419 FunFam Probable serine/threonine-protein kinase PBL8 170 383 - -
Tan08g0278 419 Gene3D Phosphorylase Kinase; domain 1 61 169 - -
Tan08g0278 419 PANTHER OS01G0588500 PROTEIN-RELATED 63 367 IPR050823 -
Tan08g0278 419 FunFam Serine/threonine-protein kinase BIK1 60 169 - -
Tan08g0278 419 CDD STKc_IRAK 90 366 - -
Tan08g0278 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0278 419 Pfam Protein tyrosine and serine/threonine kinase 88 363 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0275 Tan-Chr8:2506533 Tan08g0278 Tan-Chr8:2506965 5.70E-241 dispersed
Tan08g0276 Tan-Chr8:2506965 Tan08g0278 Tan-Chr8:2506965 1.30E-219 dispersed
Tan08g0278 Tan-Chr8:2506965 Tan09g1442 Tan-Chr9:66439340 4.90E-184 dispersed
Tan08g0277 Tan-Chr8:2506965 Tan08g0278 Tan-Chr8:2506965 2.40E-226 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67921 PF07714 PK_Tyr_Ser-Thr 5.00E-49 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0278 - - - 0.0