Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan08g0314 | ATGGTTCTAGTGCTGTCTGCGCATAGCGATACCGAACTTGTAAAGAAGGGAGTTTTTCACGGTGCTTGTGACTATTTGCTGAAACCTGTTCGAATTGAGGAGCTGAAGAATATATGGCAACATGTTCTTCGGAGAAAGAAGCCCTCTGCTAAGAACCAAAATAAGTGCACTAATGGAAATGACACTTGTTGTCAAACTGTTGAAGTTGCAAAAGGTTTCCCATCTGCAGTCAGTGCTGATAACGGGAAACCTGGTAAAAGGCGGAAAGACCAAGGCGACAATGAGGAAGGAGATGAAGAAGAGAGTACTTATGAGAATGACGACTCCTCCACCCAAAAAAAGAAAAGGGTACTTTGGGATCGAGAGTTGCACAGGAAGTTTCTTGCAGCTGTTAATCATTTGGGCTATGAAAAGGCTGTTCCTAAAAGGATCCTCGATCTGATGAATGTGGAAGACCTTACAAGAGAAAACGTTGCTAGCCATCTTCAGAAATACAGGCAGGGCCTCAAAAAAATGAGTTACCTAAAAAAAATGAGTACTCAGGAAGCTCAGCAATGTAACATGATGGCTGCATTTGGAGATACCTCCTTCAGCCCCATGGCTTCACTCAACGGATTTTCAATGGCTGGAACGGGAAGGCTCTCGAATGCTACATTCTCATCGTATTCCTCTCGAATTGCTTCCTCTGGAATGATCCAACAAGGTACTTCCCATAACTTGAGTAGCTCATTAAATATACTTGGGAAACCTCATCCAGCTCTCTTGCTGGCAAACCAACCGCCGAGCATATTCAACGGTGTTTCGACACCATTGGATCACATCCAGTTGCATCGGGACAAACACACTATGCCACTTAAAGAGTCTAATTTGATAAATGATGCCTTGAGTTTTACAGTTTCCACCAGCTTCCCCGATGCTAGAGTGAATGTTGGTAGCTCGAGCAATTATGATTTTGGTGTTTCGAGCCGTCGGTTGATGTTACAAGGGCATAAGCAACAGATTCATGGCAGTGAAGAATTTGGAGATCAGTCTTCTCTTAAGGTATCTCTAATCAAACCAGAACCCTTAGACCGCAGCACAGACGTTTCTAATATTTTGGGCCATGGTCAGTCTAACAAGAACTGGCAGGGTGTCTCACTCACTGGAATTTACCCTCCTGATGGAATGCCTGCAATTAATTTGACAATTTCTTCAGTTCAACCCGATAACAAAGACTTTCCTGTCGGTTTTCCTTCGACAAGTGTGGATTCGAGTTCTCAGCTTGATTTTAGGGAGGAGACACAATGCTATGAAGAATTAATTGGTAGTGTTGTTGAAGCCATGAATGGCAGATCAAAGCAACAATGGGAAGCAGCTAAACAGGATTGCTATGGCAACCATTGTTCTATATTGAGAAACTCTCTAGTTTCTGGGAATAGTGTTGCAGAACCCTTGAACCAGAGTGCAGCAGATCAGAACAATGCAATTCACCTCGAAAATGTCAGCAGCTCTTTGACTAACCAATTGAATAATGGTGTTCCAACCTTCATTCAGCACGGTATGGAAATGTCGATCATGGACACTTGGATGAACCCCGACGGGAAAATTCTCATGGATCCAACAAAGCTACATAATGGATTTGCAAATTCTAGTTTTAATTCCTTGGATGAATTGGTGAATGCTCTGTCGAAACAGGTATCATCAAGGCGTTTCCTTTTTTCATACGTATATTCAATTATTCTCCTACTTTATATTCAGATTACATGA | 1746 | 42.38 | MVLVLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLRRKKPSAKNQNKCTNGNDTCCQTVEVAKGFPSAVSADNGKPGKRRKDQGDNEEGDEEESTYENDDSSTQKKKRVLWDRELHRKFLAAVNHLGYEKAVPKRILDLMNVEDLTRENVASHLQKYRQGLKKMSYLKKMSTQEAQQCNMMAAFGDTSFSPMASLNGFSMAGTGRLSNATFSSYSSRIASSGMIQQGTSHNLSSSLNILGKPHPALLLANQPPSIFNGVSTPLDHIQLHRDKHTMPLKESNLINDALSFTVSTSFPDARVNVGSSSNYDFGVSSRRLMLQGHKQQIHGSEEFGDQSSLKVSLIKPEPLDRSTDVSNILGHGQSNKNWQGVSLTGIYPPDGMPAINLTISSVQPDNKDFPVGFPSTSVDSSSQLDFREETQCYEELIGSVVEAMNGRSKQQWEAAKQDCYGNHCSILRNSLVSGNSVAEPLNQSAADQNNAIHLENVSSSLTNQLNNGVPTFIQHGMEMSIMDTWMNPDGKILMDPTKLHNGFANSSFNSLDELVNALSKQVSSRRFLFSYVYSIILLLYIQIT | 581 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 2772898 | 2777527 | - | Tan0003810.7 | Tan08g0314 | 760206 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan08g0314 | 581 | ProSiteProfiles | Response regulatory domain profile. | 1 | 43 | IPR001789 | GO:0000160(InterPro) | |
Tan08g0314 | 581 | Gene3D | - | 110 | 173 | - | - | |
Tan08g0314 | 581 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 111 | 170 | IPR017930 | - | |
Tan08g0314 | 581 | SUPERFAMILY | Homeodomain-like | 111 | 171 | IPR009057 | - | |
Tan08g0314 | 581 | FunFam | Two-component response regulator | 110 | 173 | - | - | |
Tan08g0314 | 581 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 114 | 167 | IPR006447 | GO:0003677(InterPro) | |
Tan08g0314 | 581 | Gene3D | - | 1 | 83 | - | - | |
Tan08g0314 | 581 | Pfam | Myb-like DNA-binding domain | 117 | 166 | IPR001005 | - | |
Tan08g0314 | 581 | SUPERFAMILY | CheY-like | 2 | 52 | IPR011006 | - | |
Tan08g0314 | 581 | PANTHER | HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED | 33 | 322 | IPR044841 | GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro) | |
Tan08g0314 | 581 | MobiDBLite | consensus disorder prediction | 75 | 113 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan08g0314 | Tan-Chr8:2772898 | Tan08g0322 | Tan-Chr8:2772898 | 0.00E+00 | dispersed | |
Tan08g0313 | Tan-Chr8:2772898 | Tan08g0314 | Tan-Chr8:2772898 | 0.00E+00 | tandem | |
Tan08g0314 | Tan-Chr8:2772898 | Tan08g0315 | Tan-Chr8:2772898 | 3.50E-265 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28092 | None | None | None | None | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan08g0314 | K14491 | - | csv:101203718 | 781.171 |