Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan08g0390 | ATGACTATTTTTGTATTGTGTTCTCAAGTCTGGATTGAGGATCCAGAAGTTGCTTGGCTTGATGGACAGGTATCCAAGATTACAGGGCAGGAAGCTGAGATTGAAGCCAGCAATGGAAAAAAAGTTGTTGCAAAATTATCAAAAATATATCCAAAAGATATGGAGGCTCCAGCTGGTGGCGTTGATGACATGACGAAGCTATCTTACTTGCACGAGCCTGGAGTTCTACAAAATTTAAAAAGTCGATATGAACTCAATGAAATCTATACATACACTGGCAATATCCTTATTGCAATTAATCCATTCCAAAGATTGCCTCATCTTTATGATGGTCACATGATGCAACAATACAAAGGAGCACCATTTGGAGAACTGAGTCCTCATGTTTTTGCTGTTGCTGATGTTGCATACAGGGCAATGATTAATGAGGGTAAAAGCAATTCAATTCTGGTCAGTGGTGAAAGTGGAGCAGGGAAAACTGAAACCACAAAGATGCTTATGCGGTACCTTGCATTTTTAGGTGGTCGGGCGGCCACTGAAGGACGAACAGTTGAGCAACAAGTTCTTGAGTCAAATCCAGTGCTTGAAGCTTTTGGAAATGCTAAAACCGTTAGAAATAACAATTCCAGTCGCTTTGGTAAATTTGTTGAAATCCAGTTTGACAAGCATGGAAGAATCTCAGGAGCAGCTATCCGAACCTACCTTCTTGAGAGATCTCGTGTTTGCCAAGTTTCTGATCCTGAGCGCAATTATCACTGCTTTTACCTCCTTTGTGCTGCACCTCAGGAGGAAATTGAAAAATACAAGCTGGGAAATCCCAGGTCATTTCATTATCTTAATCAATCAAATTGCTATGAACTGGTTGATGTAAGTGATGCTCATGACTATCTTGCCACTAGAAGAGCTATGGATGTTGTTGGAATAAGTGCTAGGGAGCAGGAAGCAATTTTTAGAGTTGTTGCTGCAATTCTTCATCTTGGTAACATTGAATTTACCAAGGGCAAAGATGTTGATTCATCAGTTCCAAAAGATGACAAGGCCAAGTTTCATCTTAAAATGACTTCAGAGCTTCTCATGTGTGATAATGTCGGCCTTGAAGATGCATTATGTAAACGTGTCATGATCACCCCTGAAGAAGTGATAAAACGTAGCTTGGATCCTCAAAGTGCGGCTGTTAGCCGTGATGGTCTGGCCAAAACTATATATTCTCGACTATTTGACTGGCTGGTTGATAAAATTAATGTCTCAATTGGACAAGATCCTAATTCCAAATCCCTGATTGGGGTCCTTGATATCTACGGTTTTGAAAGCTTCAAAGCTAACAGTTTTGAGCAGTTCTGTATTAATTTCACAAATGAGAAGTTACAGCAACATTTTAATCAGCACGTTTTCAAAATGGAACAAGAAGAATACACAAAAGAAGAGATTGATTGGAGTTACATTGAGTTTGTCGACAACCAAGATGTGTTGGATCTCATTGAAAGAAAACCTGGTGGAATTGTGGCTCTCCTTGATGAAGCTTGCATGTTTCCAAAGTCAACACATGAAACATTTGCTAACAAGCTTTATCAGACTTTCAAAGCACATAAGCGGTTTATAAAGCCAAAACTTTCTCGAACAGATTTTACCATCGCTCATTATGCTGGAGAGGTTTTATATCAATCTGAACAGTTTTTAGACAAAAACAAGGATTATGTTGTTCCTGAACATCAGGATTTGTTGGGTACCTCCAAATGTCCATTTGTGGCTGGCCTTTTCCCCCCACTAAAAGAAGAATCTGCAAAATCTTCCAAGTTTTCTTCAATAGGGTCTCGCTTTAAGCTACAACTACAACAGTTAATGGAGACCTTAAATTCCACAGAACCTCATTACATCAGATGTGTGAAGCCAAACAACCTCTTAAAACCTGCCATCTTCGAGAATGTCAACATAATGCAACAACTGCGTTGTGGTGGTGTCTTGGAGGCAATCAGAATCAGTTGTGCAGGGTACCCTACTCGCCGTGCGTTCTTTGAATTCATTAACCGATTTGGAATTTTAGCTCAAGAATCTTTGGAAGTAAACTATGATGAAAAAGGTGTGTGCAAAAAGATACTAGAAAATCAGGGACTTAAAGGGTTTCAGATAGGTAAGACAAAAGTTTTCCTTAGGGCTGGTCAGATGGCTGAATTAGATGCGCGGAGAGCAGAGGTGCTGAGTAATGCAGCAAAGACTATTCAACGGCGCACACGAACCCATATTGCTCGCAAACAGTTTATTGCATTACGAAAGGCAACCATACATGTGCAATCTAGGTGGAGAGGAAAACTGGCTTGCAAACTTTTCAAGAATTTGAAGAGGGAGGCAGCTGCTGTGAAAATTCAGAAAAATGCTAGACGATTTCATGCGAGAACAGCCTATAAAAGACTACAAAGCTCAGTGCTTTATGTGCAAACTGGTTTAAGGGCAATGGCAGCTAGGAATGAATTCAGATTTAGGAAGCAGACAAAGGCAGCAATTATCATTCAGGCTCGATGGCGTTGCCATAAATCTGCCTCATACTATAAGAAACTTCAGAAAGGCTCAATAGTTGCACAATGTAGATGGAGAGGAAAAGTTGCAAGAAAGGAACTTAGAAAGCTCAAATTGGCTGCAAGGGAAACTGGTGCACTTAAAGAAGCAAAGGATAAGTTGGAAAAGAAAGTGGAGGAGCTTACTTGGCGCATACAATTAGAAAAACGTCTAAGGACGGACCTGGAAGAGGCAAAAGCACAGGAGATAGCGAAATTCCAAAATATTGTGCAAGAACTTCAGACAAAAATTGATGAAACAAACTCGTTGCTTGTAAAGGAGCGAGAGACTGTGAAGAAGGTTATTGAAGAAGCACCTCCTGTTATACAAGAAACCCAAGTTCTGGTTGAAGATACTAAGAAAATTGATGCTTTGACAGCAGAAGTAGAAAGCTTAAAGACCTCGATGGAGACAGAGAAAAACAGAGCTGATGAATATGAGAAAAAATATGGTGAAGTAGAACAGTCTAGAGAAGAACAACGTAAAAAGTTAGAAGACACTGAGAAAAAAGCTCATCAGCTCCAGGAATCATTGACCAGGCTAGAAGAGAAGCTTTCCAATTTGGAATCAGAGAATCAAGTTTTACGCCAACAAGCTGTGTCTATGGCACCTAATAAAATCCTCTCAGGACGGTCTAGATCAATTCTTCAGAGAGGTGCTGAAAGTGGTCATTATGGAGGGGAAGGGAGGACGCCTTTGGATCTACACAGCCCTTCTATTAACCAAAGGGATTCAGAAGTGGAGGACAAACCTCAAAAATCACTCAATGAGAAACAGCAAGAAAATCAAGAATTGCTCATTAGATGTATTGCACAGCACCTTGGCTTTTCAGCAAACAGGCCAATTGCTGCTTGTATCATCTACAAGTGCCTGCTTCAGTGGAGGTCATTTGAAGTTGAACGCACCAGTGTATTTGATAGGATAATTCAAACAATAGGCCATGCAATTGAGACTCAGGATAACAATGACGTCTTGGCCTATTGGTTATCCAATGCTTCAACACTTCTCTTACTACTTCAGCGCACTCTGAAAGCAAGTGGTGCTGCTGGAATGGCTCCACAGCGTCGGCGATCATCATCAGCTACGCTATTTGGGAGGATGACTCAAAGTTTTCGAGGAGCTCCACAAGGAGTCAATCTATCATTAATCAATGGTGGAACTAGTGGTGGAGTGGACACTTTAAGGCAAGTTGAAGCGAAGTACCCTGCTTTGCTTTTCAAGCAGCAGCTTACAGCCTACGTAGAGAAAATTTATGGAATGATAAGAGACAATTTGAAGAAAGAAATTTCTCCATTGCTGGGATTGTGCATCCAGGCACCAAGAACATCAAGGGCAAGTTTGGTGAAGGGATCTTCTCGTTCTGTTGCCAACACAGAGGCCCAGCGTGCCTTAATTGCTCACTGGCAAGGAATCGTGAAGAGCCTTGGAAACTTCTTGAACACCTTAAAAGCAAATCATGTACCCCCATTTTTGGTTCGTAAAGTCTTCATTCAAATATTTTCTTTCATCAACGTTCAACTATTTAACAGTCTTCTATTACGACGAGAATGTTGTTCGTTTAGCAATGGTGAATACGTCAAAGCTGGACTGTCTGAATTAGAGCATTGGTGTTATAAAGCTACTGATGAGTATGCAGGTTCTGCTTGGGACGAGCTAAAGCATATAAGACAAGCAATTGGGTTTCTGGTCATTCATCAGAAGCCAAAAAAGACGCTAGACGAAATAAGTCACGATCTATGCCCCGTACTAAGTATACAGCAGCTGTATCGTATCAGTACGATGTACTGGGACGACAAGTATGGCACTCATAGTGTTTCTCCAGATGTTATATCCAATATGAGGGTGTTAATGACTGAAGATTCGAACCACGCAATTAGCAATTCATTTCTATTGGACGACGATTCAAGCATTCCATTCTCAGTTGATGATTTATCAAAGTCTATGGAACAAATAGACATCGGAGACATCGAACCACCGCCACTAATTCGGGAGAACTCGGGTTTTAGTTTCTTGTTACCACGAACAGACTAA | 4581 | 40.8 | MTIFVLCSQVWIEDPEVAWLDGQVSKITGQEAEIEASNGKKVVAKLSKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKSRYELNEIYTYTGNILIAINPFQRLPHLYDGHMMQQYKGAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKHGRISGAAIRTYLLERSRVCQVSDPERNYHCFYLLCAAPQEEIEKYKLGNPRSFHYLNQSNCYELVDVSDAHDYLATRRAMDVVGISAREQEAIFRVVAAILHLGNIEFTKGKDVDSSVPKDDKAKFHLKMTSELLMCDNVGLEDALCKRVMITPEEVIKRSLDPQSAAVSRDGLAKTIYSRLFDWLVDKINVSIGQDPNSKSLIGVLDIYGFESFKANSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIERKPGGIVALLDEACMFPKSTHETFANKLYQTFKAHKRFIKPKLSRTDFTIAHYAGEVLYQSEQFLDKNKDYVVPEHQDLLGTSKCPFVAGLFPPLKEESAKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFGILAQESLEVNYDEKGVCKKILENQGLKGFQIGKTKVFLRAGQMAELDARRAEVLSNAAKTIQRRTRTHIARKQFIALRKATIHVQSRWRGKLACKLFKNLKREAAAVKIQKNARRFHARTAYKRLQSSVLYVQTGLRAMAARNEFRFRKQTKAAIIIQARWRCHKSASYYKKLQKGSIVAQCRWRGKVARKELRKLKLAARETGALKEAKDKLEKKVEELTWRIQLEKRLRTDLEEAKAQEIAKFQNIVQELQTKIDETNSLLVKERETVKKVIEEAPPVIQETQVLVEDTKKIDALTAEVESLKTSMETEKNRADEYEKKYGEVEQSREEQRKKLEDTEKKAHQLQESLTRLEEKLSNLESENQVLRQQAVSMAPNKILSGRSRSILQRGAESGHYGGEGRTPLDLHSPSINQRDSEVEDKPQKSLNEKQQENQELLIRCIAQHLGFSANRPIAACIIYKCLLQWRSFEVERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGAPQGVNLSLINGGTSGGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFIQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLSELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNHAISNSFLLDDDSSIPFSVDDLSKSMEQIDIGDIEPPPLIRENSGFSFLLPRTD | 1526 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 3538437 | 3554001 | + | Tan0003066.1 | Tan08g0390 | 760282 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan08g0390 | 1526 | FunFam | Myosin 2 | 309 | 424 | - | - | |
| Tan08g0390 | 1526 | Pfam | DIL domain | 1345 | 1448 | IPR002710 | - | |
| Tan08g0390 | 1526 | Pfam | Myosin N-terminal SH3-like domain | 9 | 49 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan08g0390 | 1526 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 782 | 880 | IPR027417 | - | |
| Tan08g0390 | 1526 | Gene3D | - | 249 | 307 | - | - | |
| Tan08g0390 | 1526 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 309 | 598 | - | - | |
| Tan08g0390 | 1526 | SMART | MYSc_2a | 54 | 730 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan08g0390 | 1526 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 5 | 54 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan08g0390 | 1526 | PRINTS | Myosin heavy chain signature | 146 | 171 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan08g0390 | 1526 | PRINTS | Myosin heavy chain signature | 89 | 108 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan08g0390 | 1526 | PRINTS | Myosin heavy chain signature | 426 | 454 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan08g0390 | 1526 | PRINTS | Myosin heavy chain signature | 479 | 507 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan08g0390 | 1526 | PRINTS | Myosin heavy chain signature | 193 | 220 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan08g0390 | 1526 | ProSiteProfiles | IQ motif profile. | 803 | 832 | - | - | |
| Tan08g0390 | 1526 | FunFam | unconventional myosin-Va | 831 | 878 | - | - | |
| Tan08g0390 | 1526 | FunFam | Class V myosin | 436 | 572 | - | - | |
| Tan08g0390 | 1526 | Pfam | Myosin head (motor domain) | 61 | 717 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan08g0390 | 1526 | ProSiteProfiles | IQ motif profile. | 732 | 759 | - | - | |
| Tan08g0390 | 1526 | ProSiteProfiles | IQ motif profile. | 828 | 855 | - | - | |
| Tan08g0390 | 1526 | ProSiteProfiles | IQ motif profile. | 755 | 784 | - | - | |
| Tan08g0390 | 1526 | MobiDBLite | consensus disorder prediction | 1070 | 1108 | - | - | |
| Tan08g0390 | 1526 | ProSiteProfiles | IQ motif profile. | 851 | 880 | - | - | |
| Tan08g0390 | 1526 | ProSiteProfiles | IQ motif profile. | 780 | 807 | - | - | |
| Tan08g0390 | 1526 | FunFam | Myosin heavy chain | 249 | 304 | - | - | |
| Tan08g0390 | 1526 | SMART | DIL_2 | 1344 | 1451 | IPR002710 | - | |
| Tan08g0390 | 1526 | PANTHER | MYOSIN | 9 | 1468 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0009860(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Tan08g0390 | 1526 | Coils | Coil | 965 | 1048 | - | - | |
| Tan08g0390 | 1526 | Gene3D | - | 664 | 727 | - | - | |
| Tan08g0390 | 1526 | CDD | MyosinXI_CBD | 1107 | 1492 | IPR037975 | GO:0007015(InterPro) | |
| Tan08g0390 | 1526 | CDD | MYSc_Myo11 | 73 | 717 | IPR036018 | - | |
| Tan08g0390 | 1526 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 35 | 782 | IPR027417 | - | |
| Tan08g0390 | 1526 | MobiDBLite | consensus disorder prediction | 985 | 1026 | - | - | |
| Tan08g0390 | 1526 | Gene3D | - | 782 | 829 | - | - | |
| Tan08g0390 | 1526 | Gene3D | - | 830 | 879 | - | - | |
| Tan08g0390 | 1526 | Gene3D | - | 730 | 781 | - | - | |
| Tan08g0390 | 1526 | Coils | Coil | 920 | 947 | - | - | |
| Tan08g0390 | 1526 | Gene3D | - | 436 | 620 | - | - | |
| Tan08g0390 | 1526 | MobiDBLite | consensus disorder prediction | 1091 | 1107 | - | - | |
| Tan08g0390 | 1526 | Pfam | IQ calmodulin-binding motif | 756 | 775 | IPR000048 | GO:0005515(InterPro) | |
| Tan08g0390 | 1526 | Pfam | IQ calmodulin-binding motif | 782 | 801 | IPR000048 | GO:0005515(InterPro) | |
| Tan08g0390 | 1526 | Pfam | IQ calmodulin-binding motif | 734 | 752 | IPR000048 | GO:0005515(InterPro) | |
| Tan08g0390 | 1526 | Pfam | IQ calmodulin-binding motif | 855 | 872 | IPR000048 | GO:0005515(InterPro) | |
| Tan08g0390 | 1526 | Pfam | IQ calmodulin-binding motif | 829 | 849 | IPR000048 | GO:0005515(InterPro) | |
| Tan08g0390 | 1526 | FunFam | unconventional myosin-Va | 783 | 830 | - | - | |
| Tan08g0390 | 1526 | Coils | Coil | 874 | 908 | - | - | |
| Tan08g0390 | 1526 | ProSiteProfiles | Dilute domain profile. | 1156 | 1469 | IPR002710 | - | |
| Tan08g0390 | 1526 | FunFam | unconventional myosin-Va | 734 | 782 | - | - | |
| Tan08g0390 | 1526 | ProSiteProfiles | Myosin motor domain profile. | 59 | 729 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Tan08g0390 | 1526 | Gene3D | Kinesin motor domain | 62 | 659 | IPR036961 | - | |
| Tan08g0390 | 1526 | SMART | iq_5 | 754 | 776 | IPR000048 | GO:0005515(InterPro) | |
| Tan08g0390 | 1526 | SMART | iq_5 | 731 | 753 | IPR000048 | GO:0005515(InterPro) | |
| Tan08g0390 | 1526 | SMART | iq_5 | 850 | 872 | IPR000048 | GO:0005515(InterPro) | |
| Tan08g0390 | 1526 | SMART | iq_5 | 802 | 824 | IPR000048 | GO:0005515(InterPro) | |
| Tan08g0390 | 1526 | SMART | iq_5 | 779 | 801 | IPR000048 | GO:0005515(InterPro) | |
| Tan08g0390 | 1526 | SMART | iq_5 | 827 | 849 | IPR000048 | GO:0005515(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan06g1142 | Tan-Chr6:11413587 | Tan08g0390 | Tan-Chr8:3538437 | 8.10E-233 | dispersed | |
| Tan08g0390 | Tan-Chr8:3538437 | Tan09g1110 | Tan-Chr9:63396910 | 0.00E+00 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan08g0390 | K10357 | - | csv:101206606 | 2867.03 |