Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0410 ATGAATGCCAATACCCATGTGATGTTCTCTCTTTTCTTCGTCTTGTTTGGGCTCTGTAATGCCGTTAATTCTGATCCTTTTGTTCCTTCCGATCCGCCATTGTTGTTGCGTTGTGGTTCGAACGAAGACGGCACCGATGATAATGGCCGAAAATGGACCTCCGATTCGAAATTCGTGGACCCCAAAAATACCCTAGGGGCACCGGCGGGATTTCAAGATCCGTCGATGACTTCGCAGGTTCCGTATATGGATGCTAGGGTTTTCACTGCTACGACGGCGTATAAATTTCCGATTAAACCTAGTAGTCGATATTGGCTTCGACTCCATTTTTATCCTTCCACTTATGGCCCTCATGATTCTGCAAATGCCTTTTTCACCGTCACTGCGAATGATTTGGGCCTTGTGAAGAATTTTAGCGCTCATATCACATGCGAGGCCTTCACTCAGGCCTACATTGTTCGCGAATTTACTCTCGCGCCTTTGAAATCTGAAACCCTAACTTTGACCTTCACCCCTGTTACTGGATTTGCTTTTGTGAATGGGATTGAATTGATTCAAATGCCGGAGATCTTTGGGGAGGCTATAAGGGTTGGTGGACGGCTTCAAACTATGGATGTTACGGGGCTGAATATGCAGACGATGGTGAGATTAAACGTTGGGGGGGGCTACATTTCTCCGGCGAATGATTCGGGTTTGACTAGACCTTGGTATGATGATTATCCTTATCTTGATGGTGCTTCTGAGGGTATCGTGCTTGAAGCTACTCCGAGGTTGGTGATTAATTATAAAGATATGCCGAAATATATTGCGCCTGTGGAAGTTTACAGGACGTCGAGATCAATGGGGACAGCTAAGGCTCTAAATGCTAATTACAATTTGACATGGGTGTTTCCTAATATTGATCCAGGATTCATGTATCTTGTGAGGTTGCATTTCTGTGATCTGTCTTTGAGTAGGCCAAATCAGGTGGTGTTTGATGTGTTTATCAACAATCAAACAGCGGATGCGAATTCGATCGATGTGATTGCTATGGCGGGCGCTAGGGGGATTCCAAAAGTCAGGGATTATGTTGTGTTTAGTGCAGAAGCACCAACAATGCAGCGGATTTGGCTGGCATTGCATCCTCAGATGTCGGATTCACCTGAGTTTGCGGATGCTATGTTGAATGGGGTCGAGGTATTCAAGCTTGAATCTGGGAAGAACTTGGCAGGGAAGAATCCTCAACCCTCAGATTTTAGGATGAAGGTTGAGGCTGAAACAGAGAGACAATTTGAAGCAAAGAGCAACAATGCTGAAATGATTGGAGGGGCTGCAGGGGGTGCTGCAGCTTTTGTTGTGGTCGCACTTTGCTTTGCAGTGTACCAAAGGAAGAACAGAATGCCAGGGACTGATTCACACACAACTAGCTGGTTACCGATCTATGGGAATTCACATTCGAGTGGGAGCAAATCGACAGTATCTGGGAAGAGTACGGCGAGTAATTTGGCGCAAGGTTTGGCCCGGCATTTTTCGCTTCCGGAGATTTTACATGCTACCAAGAACTTTAGCGAGTCTAATGTGATTGGGGTTGGAGGATTTGGGAAGGTGTACAAGGGAGTGATTGATGGAGGGACAAAAGTTGCTATTAAAAGGTCGAACCCGCAGTCAGAACAGGGAGTTCACGAATTCCTTACGGAAATCGATTTGCTTTCAAAGCTGAGGCACAAACATTTGGTATCCTTGATTGGTTTTTGTGATGAAGAGAATGAGATGTGTTTGATTTATGATTATATGGGTTTGGGAACTCTGAGGGAACATCTGTATAAGACCAATAATAAAACTCGTCTCCCATGGAAGCAAAGGCTGGAAATTTGTATTGGAGCAGCTAGAGGACTTCACTACCTTCACACAGGAGCACAGTACACCATCATTCATAGAGATGTTAAAACTACCAACATTCTCTTGGATGAAAACTGGGTTGCAAAGGTTTCTGATTTCGGGCTCTCGAAAACAGGTCCGAACATGTCTAACGGTCATGTTAGCACGGTGGTTAAGGGTAGCTTTGGCTACTTAGATCCAGAGTACTTCCGAAGGCAGCAACTGACTGAAAAATCTGATGTCTATTCTTTTGGAGTTGTCCTGTTTGAAGTGTTGTGTGCAAGGCCTGCTCTAAATCCAAGCCTGCCGAAGGAACAGGTTAGTCTTGCAGATTGGGCGTTGCACTGCAAACGGAAAGGATTTCTTGACGATCTCATCGACCCCTACCTCAAAGGGAAAATCACCCCTGAAAGCTTGAAGAAGTTTGCTGATGCAGCTGAGAAATGCCTTGATGACCATGGAGCCGAGCGGCCGTCTATGGGTGATGTCTTGTGGAACCTTGAATTTGCTCTCCAACTACAAGAAAGTGCCGATAGTGGTGGTTCGAGTCACAGCTCGAGGATAAACGACGAAGATAGCCACAGAAACCAAGACATGACGGCACATTACAACAACCTCAGCCTTGGAAGTGAGCAAGACTTACTTCAAACTAATGAACAAAACAGTACTGCAATCTTCTCCCAACTTGTCCATCCAACAGGTCGATAA 2565 45.42 MNANTHVMFSLFFVLFGLCNAVNSDPFVPSDPPLLLRCGSNEDGTDDNGRKWTSDSKFVDPKNTLGAPAGFQDPSMTSQVPYMDARVFTATTAYKFPIKPSSRYWLRLHFYPSTYGPHDSANAFFTVTANDLGLVKNFSAHITCEAFTQAYIVREFTLAPLKSETLTLTFTPVTGFAFVNGIELIQMPEIFGEAIRVGGRLQTMDVTGLNMQTMVRLNVGGGYISPANDSGLTRPWYDDYPYLDGASEGIVLEATPRLVINYKDMPKYIAPVEVYRTSRSMGTAKALNANYNLTWVFPNIDPGFMYLVRLHFCDLSLSRPNQVVFDVFINNQTADANSIDVIAMAGARGIPKVRDYVVFSAEAPTMQRIWLALHPQMSDSPEFADAMLNGVEVFKLESGKNLAGKNPQPSDFRMKVEAETERQFEAKSNNAEMIGGAAGGAAAFVVVALCFAVYQRKNRMPGTDSHTTSWLPIYGNSHSSGSKSTVSGKSTASNLAQGLARHFSLPEILHATKNFSESNVIGVGGFGKVYKGVIDGGTKVAIKRSNPQSEQGVHEFLTEIDLLSKLRHKHLVSLIGFCDEENEMCLIYDYMGLGTLREHLYKTNNKTRLPWKQRLEICIGAARGLHYLHTGAQYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMSNGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPSLPKEQVSLADWALHCKRKGFLDDLIDPYLKGKITPESLKKFADAAEKCLDDHGAERPSMGDVLWNLEFALQLQESADSGGSSHSSRINDEDSHRNQDMTAHYNNLSLGSEQDLLQTNEQNSTAIFSQLVHPTGR 854
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 3814332 3817107 - Tan0008160.1 Tan08g0410 760302
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0410 854 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0410 854 CDD STKc_IRAK 521 787 - -
Tan08g0410 854 Gene3D Transferase(Phosphotransferase) domain 1 591 812 - -
Tan08g0410 854 Pfam Protein tyrosine and serine/threonine kinase 518 714 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0410 854 Pfam Malectin-like domain 37 395 IPR024788 -
Tan08g0410 854 SMART serkin_6 515 789 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0410 854 FunFam receptor-like protein kinase FERONIA 477 590 - -
Tan08g0410 854 Gene3D Phosphorylase Kinase; domain 1 476 590 - -
Tan08g0410 854 FunFam FERONIA receptor-like kinase 209 397 - -
Tan08g0410 854 PANTHER OS07G0166700 PROTEIN 503 794 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Tan08g0410 854 SUPERFAMILY Protein kinase-like (PK-like) 500 785 IPR011009 -
Tan08g0410 854 FunFam FERONIA receptor-like kinase 33 188 - -
Tan08g0410 854 ProSiteProfiles Protein kinase domain profile. 515 789 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0410 854 Gene3D - 209 396 - -
Tan08g0410 854 Gene3D - 34 188 - -
Tan08g0410 854 FunFam Receptor-like protein kinase FERONIA 591 804 - -
Tan08g0410 854 ProSitePatterns Protein kinases ATP-binding region signature. 521 543 IPR017441 GO:0005524(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan03g0698 Tan-Chr3:62515479 Tan08g0410 Tan-Chr8:3814332 4.00E-231 dispersed
Tan03g0699 Tan-Chr3:62515479 Tan08g0410 Tan-Chr8:3814332 4.00E-231 dispersed
Tan04g1907 Tan-Chr4:63764258 Tan08g0410 Tan-Chr8:3814332 1.10E-167 dispersed
Tan06g0330 Tan-Chr6:2602063 Tan08g0410 Tan-Chr8:3814332 3.80E-162 dispersed
Tan08g0410 Tan-Chr8:3814332 Tan09g2091 Tan-Chr9:71283374 6.30E-162 dispersed
Tan08g0410 Tan-Chr8:3814332 Tan04g1902 Tan-Chr4:63389487 6.30E-170 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67925 PF12819 Malectin_like 5.30E-33 CL0202 Tan PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0410 - - - 0.0