Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0428 ATGGTTTCTGTAATCGCGAATTTCAGTGCGCGCCAAAACCCTGAAACTTTCTTCCTCATCCCGCCAATCCCCCTTCATTTATCTTCAACCTTCTTCCTCCATTCTAACCTAATTCTTCTGCAATCCAAACAATTTTTCCTCTTCCTCATGGATCTCTCCAACATTGCCCGCAAGCTCGATCTTTCCGACTCTGAAGCCATCCTTCGAAAAGCTGTGGAGTTTCGTCGCCTCTCCGATCTCCATTTCAATTCTTCCGTTATTGGCATTGGGGAGGTTTGCAAGGCCATAATCTGTTTGGAAATTGCAGCCACAAGATTGGGGATTCTATTTGATAGATCGAGTGCAATCAAGTTAAGCGGGATGTCGGAGAAGGCGTATACCAGATCTTTTAATTTGTTGCAGAATGGTCTTGGTTTCAAAAGTAGGCTTGATATTAGAGAATTGGCAGTGCAGTTTGGGTGTATTAGGCTGGTTGCTTCAGTCCAAAAGGGCTTATCTTTATACAAGGACCGGTTTGTTGCATCACTGCCAGCTTCTCGACGGGCGAGTGCTGACTTCTCCCGGTCTGTGTTTACGGCTGTAGCCTTCTACTTGTGTGCAAAAAAGCACAAGCTCAAGGTTGATAAAGTTAAGCTAATTGAGCTTAGTGGTACTTCTGAATCAGAATTTTCATGTGTTGCTACTTCTATGAAGGACTTGTGCTTTGATGTCTTTGGGATTTCTACTGAAAAGAAAGATACTAGGGATGCCAAGGGGAATAGAGACCTACTAGATGCATTGCCAGAGAAAAGGAAACTCGAGGATGGTGGTTATTTATACGATGATAGTGAAGAGTCTCCAAGATCAAAACAATGCAAGCCAACTGAAGAGCAAACCTATAATCAGTGGAAATTCTCTGTCATTGCTTCCAATAACCTAACAAAGACAAAAGTTCTTGGCAAGCGAACCAGACAAAGTTCCCTTCAATTCCTAAGGAAAATAAAGAAAAAAGATGTAAAGTAG 1002 42.42 MVSVIANFSARQNPETFFLIPPIPLHLSSTFFLHSNLILLQSKQFFLFLMDLSNIARKLDLSDSEAILRKAVEFRRLSDLHFNSSVIGIGEVCKAIICLEIAATRLGILFDRSSAIKLSGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCIRLVASVQKGLSLYKDRFVASLPASRRASADFSRSVFTAVAFYLCAKKHKLKVDKVKLIELSGTSESEFSCVATSMKDLCFDVFGISTEKKDTRDAKGNRDLLDALPEKRKLEDGGYLYDDSEESPRSKQCKPTEEQTYNQWKFSVIASNNLTKTKVLGKRTRQSSLQFLRKIKKKDVK 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4078277 4081510 + Tan0013708.1 Tan08g0428 760320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0428 333 MobiDBLite consensus disorder prediction 270 291 - -
Tan08g0428 333 CDD Orc6_mid 141 237 - -
Tan08g0428 333 MobiDBLite consensus disorder prediction 270 285 - -
Tan08g0428 333 Gene3D - 140 237 - -
Tan08g0428 333 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 50 310 IPR020529 GO:0005664(PANTHER)|GO:0005664(InterPro)|GO:0006260(InterPro)|GO:0006270(PANTHER)
Tan08g0428 333 Pfam Origin recognition complex subunit 6 (ORC6) 52 140 IPR008721 GO:0003677(InterPro)|GO:0005664(InterPro)|GO:0006260(InterPro)
Tan08g0428 333 Pfam ORC6 second cyclin-like domain 143 233 IPR054113 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0428 Tan-Chr8:4078277 Tan08g0893 Tan-Chr8:11736484 2.90E-126 dispersed
Tan08g0428 Tan-Chr8:4078277 Tan08g0429 Tan-Chr8:4078277 1.50E-146 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0428 K02608 - csv:101204841 475.322