Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0432 ATGGCGTTGAGGTGCAGGAAAATTGATGAGATAGTTGAAGTATTTGATCGTGAAGAACGTCCGGCTATGGCGAAAACTCACAAACGGCGGTGGAAGATGGCCTTCGCTGCCATTTATTTCACTAGAGTTCTTATCTCTCTGTCGAAGAAAGTCACCGGCCGTAAATCCGGCGCTCTTTTGCGCTCACTTTCTTACGTTGCTCTTGATGTGCAGTCGAATCACAATGATGATAGTACGGATTCCAGAGAGTGGCCGTGCATGGCGGCATTTTCCAACGTCGATCGGAAAGTTCTAAGCGAGATGGTGAGGGAGAAGAATGGTGAGTGTTTGAATCGATTTGGAGGCGTTCACGGACTGGCAACTTTGCTCAAGACTAACACTCGTAGCGGAATCGGTGCGACTGAGGATGATCTAATTTTCAGAAAGAGCGCATTCGGAACGAATACTTACTCGAAGCTCCCTGGGAGAAGCTTCTTTAGTTTCGTGATCGAAGCGTTCAACGATACAACGATTATCATTCTTCTGATCTGTGCCGCGCTTTCTTTGGGATTTGGTATCAAACAACACGGTTGGGATAACGGATGGTACGACGGCGGCAGTATTGTTATCGCCATATTTCTGGTGGTCGTCGTTTCCGCCGCGAGCAACTTCAAGCAATCGAGACAGTTCGAGAAGCTTTCAAACGAAAGAGACGACATAAAAATCGAAGTCACCAGAGCTGGTCGACGCAAACCGGTATCGATATTTGAACTCCTCGTCGGAGACATCGTGTATTTGAAGATCGGAGATCAGATTCCCGCTGACGGAGTGTTCCTCGATGGACATTCACTGAAGATTGACGAATCGAGCATGACCGGAGAGAGCGAACGCGTTGAGGTAAATCATGAAATTAATCCGTTTCTGCTTTCAGGCACGAAAGTGAGCGATGGATTTGGTGTGATGATGGTGACTTCTGTGGGAATGAACACGGCCTGGGGAGAGATGATGAGTTCAATTAGGCGAGAAGTTAATGAGGAAACTCCATTGCAAGCTCGTCTGAACAAGATGACCGCCATTATCGGGAAGCTAGGGCTGACAGTCGCCGTGCTGGTTCTTCTTGTTCTGCTGGTTCGCTATTTCACTGGGAGCACCCGCGAGTTCAATGGAAGCAAGACGAGGTTCGATGATGTCATGAATGCAGTTCTTGGCATGGTTGCAGCGGCTGTTACGATCGTTGTCGTGGCGATTCCAGAAGGTTTGCCTCTAGCTGTTACTTTAACTTTAGCTTACTCCATGAAAAAGATGATGGCAGATAATGCAATGGTTAGGAAACTCTCCGCTTGTGAGACAATGGGCTCGGCGACAACAATTTGTACTGATAAAACTGGTACTCTTACTTTGAATGAGATGAAAGTCACAGAGTTTTGGATTGGGGAAGATAAAATTATAGACACAGATTATTCTAATTCAAGGATTGTGAGTAAGGTTGTTGAATTACTGCACCAAGCAGTTGGATTGAATACAACTGGTGGTGTTCAAAGACCAGCTTCTTTGCCTCTAGAAATATTCGGGAGTCCGACTGAGAAAGCGATACTTACGTGGGCGGTATTCGACCTGGATTTGAACTTGGATGAACTGAAGAAACAATATGAGATAATCCAGGTAGAGACTTTCAGTTCAGAGAAAAAGAGAAGCGGAGTTTCGATGAGACGATATGGCGAGAGGGCTATTAATACACACTGGAAAGGAGCAGCAGAGATGATATTGGCTATGTGTTCATATTATTATGAGAAACAAGGAACAGCTAGAGCCATTGATGATGAAACAAGAAGACAGTTGACTGCAGTAATCACAACTATGGCAGAAAAAAGTCTGCGATGCATAGCCTTTGCCCACAAGTCGAACGAAGAAGAAAACCTAGAAGTTCCTTCAAAACTAGACGAATCAGGATTGACATTACTGGGAATGGTTGGTTTGAAGGATCCTTGCAGGCCAGGAGTTAGAGAAGCCGTAGAATCATGCAGAGCTGCTGGGGTGGACATCAAAATGGTGACAGGTGATAATCTGCACACAGCAACTGCCATAGCAATTGAATGTGGAATACTAAATCTCGACGTCACTACAAACAGCGAAATTGTAGTGGAGGGCGTACAATTTAGAAACTACACACCAGAGGAGAGACTGCAAAAGATTGGAAACATCCGAGTGATGGCTAGATCTTCCCCATTTGACAAGCTTCTTATGGTACAATGCTTGAAGAATCAAGGCCATGTAGTGGCAGTCACAGGGGATGGAACAAATGATGCCCCTGCTCTTCATGAGGCAGACATTGGCCTTTCCATGGGGATTCAAGGAACTGAAGTGGCAAAGGAGAGCTCCGACATCGTCATCTTGGACGATAACTTTACATCAGTCGTCACTGTCTTGAAATGGGGAAGATGTGTTTACAACAACATTCAGAAGTTCATTCAATTTCAGCTCACTGTGAATGTTGCAGCACTCATCGTAAACTTCATCGCCGCTGTCTCCTCCGGTAAAGTCCCATTAACAGCAGTTCAGTTACTATGGGTGAATCTCATAATGGACACCATGGGAGCTTTAGCCTTAGCCACTGAGCTACCCACCAACGATCTCATGATGAAAACACCGGTCGGTCGATCCGAGCCATTGGTGACGATAGTCATGTGGAGGAACCTCATTGCTCAGGCTGTGTATCAGGTGACAGTCTTACTGGTTTTGGAGTTCAAAGGAAGTTCTATCTTCAATGTGAATGAAAAGGTTAAGAGCACACTAATCTTCAACACTTTTGTTCTATGCCAAATCTTCAATGAGTTCAATGCAAGGAAGTTAGAGAAGAAGAATATATTTCAAGGGCTACACAAAAGCAAGCTCTTTTTGGCAATAATTGTGATAACCTTAGCTTTTCAAGTGGTAATGGTTGAGCTTTTGGGAAGATTTGCCAATACTGAGAGGTTGAATTGGGGCCAGTGGGGGGCATGTATTGGCATTGCAGCTTTGTCTTGGCCAATTGGATGGCTCTCCAAGTTAATACCAATTTCAGCCCTGAAATTTCCAAGGAGAAGAAATTCTGCACCATAA 3078 45.0 MALRCRKIDEIVEVFDREERPAMAKTHKRRWKMAFAAIYFTRVLISLSKKVTGRKSGALLRSLSYVALDVQSNHNDDSTDSREWPCMAAFSNVDRKVLSEMVREKNGECLNRFGGVHGLATLLKTNTRSGIGATEDDLIFRKSAFGTNTYSKLPGRSFFSFVIEAFNDTTIIILLICAALSLGFGIKQHGWDNGWYDGGSIVIAIFLVVVVSAASNFKQSRQFEKLSNERDDIKIEVTRAGRRKPVSIFELLVGDIVYLKIGDQIPADGVFLDGHSLKIDESSMTGESERVEVNHEINPFLLSGTKVSDGFGVMMVTSVGMNTAWGEMMSSIRREVNEETPLQARLNKMTAIIGKLGLTVAVLVLLVLLVRYFTGSTREFNGSKTRFDDVMNAVLGMVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADNAMVRKLSACETMGSATTICTDKTGTLTLNEMKVTEFWIGEDKIIDTDYSNSRIVSKVVELLHQAVGLNTTGGVQRPASLPLEIFGSPTEKAILTWAVFDLDLNLDELKKQYEIIQVETFSSEKKRSGVSMRRYGERAINTHWKGAAEMILAMCSYYYEKQGTARAIDDETRRQLTAVITTMAEKSLRCIAFAHKSNEEENLEVPSKLDESGLTLLGMVGLKDPCRPGVREAVESCRAAGVDIKMVTGDNLHTATAIAIECGILNLDVTTNSEIVVEGVQFRNYTPEERLQKIGNIRVMARSSPFDKLLMVQCLKNQGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIVILDDNFTSVVTVLKWGRCVYNNIQKFIQFQLTVNVAALIVNFIAAVSSGKVPLTAVQLLWVNLIMDTMGALALATELPTNDLMMKTPVGRSEPLVTIVMWRNLIAQAVYQVTVLLVLEFKGSSIFNVNEKVKSTLIFNTFVLCQIFNEFNARKLEKKNIFQGLHKSKLFLAIIVITLAFQVVMVELLGRFANTERLNWGQWGACIGIAALSWPIGWLSKLIPISALKFPRRRNSAP 1025
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 4135405 4138610 + Tan0017395.1 Tan08g0432 760324
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0432 1025 SUPERFAMILY Calcium ATPase, transduction domain A 235 331 IPR008250 -
Tan08g0432 1025 Gene3D - 448 800 IPR023214 -
Tan08g0432 1025 SFLD C1.7: P-type atpase like 433 808 - -
Tan08g0432 1025 NCBIfam calcium-translocating P-type ATPase, PMCA-type 91 1012 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Tan08g0432 1025 SUPERFAMILY HAD-like 449 859 IPR036412 -
Tan08g0432 1025 Pfam E1-E2 ATPase 234 429 - -
Tan08g0432 1025 Gene3D - 461 655 IPR023299 GO:0000166(InterPro)
Tan08g0432 1025 FunFam Calcium-transporting ATPase 211 333 - -
Tan08g0432 1025 Pfam Cation transporting ATPase, C-terminus 840 1010 IPR006068 -
Tan08g0432 1025 SUPERFAMILY Calcium ATPase, transmembrane domain M 114 1014 IPR023298 -
Tan08g0432 1025 Pfam Cation transporter/ATPase, N-terminus 114 181 IPR004014 -
Tan08g0432 1025 PRINTS P-type cation-transporting ATPase superfamily signature 280 294 - -
Tan08g0432 1025 PRINTS P-type cation-transporting ATPase superfamily signature 670 680 - -
Tan08g0432 1025 PRINTS P-type cation-transporting ATPase superfamily signature 779 791 - -
Tan08g0432 1025 PRINTS P-type cation-transporting ATPase superfamily signature 755 774 - -
Tan08g0432 1025 PRINTS P-type cation-transporting ATPase superfamily signature 648 659 - -
Tan08g0432 1025 PRINTS P-type cation-transporting ATPase superfamily signature 451 465 - -
Tan08g0432 1025 ProSitePatterns E1-E2 ATPases phosphorylation site. 453 459 IPR018303 -
Tan08g0432 1025 Gene3D - 134 333 - -
Tan08g0432 1025 Pfam haloacid dehalogenase-like hydrolase 449 769 - -
Tan08g0432 1025 PRINTS H+-transporting ATPase (proton pump) signature 606 624 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan08g0432 1025 PRINTS H+-transporting ATPase (proton pump) signature 787 812 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan08g0432 1025 PRINTS H+-transporting ATPase (proton pump) signature 755 771 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan08g0432 1025 PANTHER CATION TRANSPORTING ATPASE 83 1012 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Tan08g0432 1025 NCBIfam HAD-IC family P-type ATPase 395 489 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan08g0432 1025 NCBIfam HAD-IC family P-type ATPase 726 837 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan08g0432 1025 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 457 660 IPR023299 GO:0000166(InterPro)
Tan08g0432 1025 SFLD p-type atpase 433 808 IPR044492 -
Tan08g0432 1025 Gene3D - 164 1007 - -
Tan08g0432 1025 FunFam Calcium-transporting ATPase 772 1014 - -
Tan08g0432 1025 FunFam Calcium-transporting ATPase 649 800 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0469 Tan-Chr2:4359425 Tan08g0432 Tan-Chr8:4135405 3.70E-105 dispersed
Tan02g0470 Tan-Chr2:4359425 Tan08g0432 Tan-Chr8:4135405 1.00E-110 dispersed
Tan06g1030 Tan-Chr6:9257098 Tan08g0432 Tan-Chr8:4135405 0.00E+00 dispersed
Tan08g0432 Tan-Chr8:4135405 Tan08g0905 Tan-Chr8:12498995 1.20E-284 dispersed
Tan08g0432 Tan-Chr8:4135405 Tan01g4694 Tan-Chr1:112877771 3.00E-227 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0432 K01537 - csv:101218531 1619.36