Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan08g0432 | ATGGCGTTGAGGTGCAGGAAAATTGATGAGATAGTTGAAGTATTTGATCGTGAAGAACGTCCGGCTATGGCGAAAACTCACAAACGGCGGTGGAAGATGGCCTTCGCTGCCATTTATTTCACTAGAGTTCTTATCTCTCTGTCGAAGAAAGTCACCGGCCGTAAATCCGGCGCTCTTTTGCGCTCACTTTCTTACGTTGCTCTTGATGTGCAGTCGAATCACAATGATGATAGTACGGATTCCAGAGAGTGGCCGTGCATGGCGGCATTTTCCAACGTCGATCGGAAAGTTCTAAGCGAGATGGTGAGGGAGAAGAATGGTGAGTGTTTGAATCGATTTGGAGGCGTTCACGGACTGGCAACTTTGCTCAAGACTAACACTCGTAGCGGAATCGGTGCGACTGAGGATGATCTAATTTTCAGAAAGAGCGCATTCGGAACGAATACTTACTCGAAGCTCCCTGGGAGAAGCTTCTTTAGTTTCGTGATCGAAGCGTTCAACGATACAACGATTATCATTCTTCTGATCTGTGCCGCGCTTTCTTTGGGATTTGGTATCAAACAACACGGTTGGGATAACGGATGGTACGACGGCGGCAGTATTGTTATCGCCATATTTCTGGTGGTCGTCGTTTCCGCCGCGAGCAACTTCAAGCAATCGAGACAGTTCGAGAAGCTTTCAAACGAAAGAGACGACATAAAAATCGAAGTCACCAGAGCTGGTCGACGCAAACCGGTATCGATATTTGAACTCCTCGTCGGAGACATCGTGTATTTGAAGATCGGAGATCAGATTCCCGCTGACGGAGTGTTCCTCGATGGACATTCACTGAAGATTGACGAATCGAGCATGACCGGAGAGAGCGAACGCGTTGAGGTAAATCATGAAATTAATCCGTTTCTGCTTTCAGGCACGAAAGTGAGCGATGGATTTGGTGTGATGATGGTGACTTCTGTGGGAATGAACACGGCCTGGGGAGAGATGATGAGTTCAATTAGGCGAGAAGTTAATGAGGAAACTCCATTGCAAGCTCGTCTGAACAAGATGACCGCCATTATCGGGAAGCTAGGGCTGACAGTCGCCGTGCTGGTTCTTCTTGTTCTGCTGGTTCGCTATTTCACTGGGAGCACCCGCGAGTTCAATGGAAGCAAGACGAGGTTCGATGATGTCATGAATGCAGTTCTTGGCATGGTTGCAGCGGCTGTTACGATCGTTGTCGTGGCGATTCCAGAAGGTTTGCCTCTAGCTGTTACTTTAACTTTAGCTTACTCCATGAAAAAGATGATGGCAGATAATGCAATGGTTAGGAAACTCTCCGCTTGTGAGACAATGGGCTCGGCGACAACAATTTGTACTGATAAAACTGGTACTCTTACTTTGAATGAGATGAAAGTCACAGAGTTTTGGATTGGGGAAGATAAAATTATAGACACAGATTATTCTAATTCAAGGATTGTGAGTAAGGTTGTTGAATTACTGCACCAAGCAGTTGGATTGAATACAACTGGTGGTGTTCAAAGACCAGCTTCTTTGCCTCTAGAAATATTCGGGAGTCCGACTGAGAAAGCGATACTTACGTGGGCGGTATTCGACCTGGATTTGAACTTGGATGAACTGAAGAAACAATATGAGATAATCCAGGTAGAGACTTTCAGTTCAGAGAAAAAGAGAAGCGGAGTTTCGATGAGACGATATGGCGAGAGGGCTATTAATACACACTGGAAAGGAGCAGCAGAGATGATATTGGCTATGTGTTCATATTATTATGAGAAACAAGGAACAGCTAGAGCCATTGATGATGAAACAAGAAGACAGTTGACTGCAGTAATCACAACTATGGCAGAAAAAAGTCTGCGATGCATAGCCTTTGCCCACAAGTCGAACGAAGAAGAAAACCTAGAAGTTCCTTCAAAACTAGACGAATCAGGATTGACATTACTGGGAATGGTTGGTTTGAAGGATCCTTGCAGGCCAGGAGTTAGAGAAGCCGTAGAATCATGCAGAGCTGCTGGGGTGGACATCAAAATGGTGACAGGTGATAATCTGCACACAGCAACTGCCATAGCAATTGAATGTGGAATACTAAATCTCGACGTCACTACAAACAGCGAAATTGTAGTGGAGGGCGTACAATTTAGAAACTACACACCAGAGGAGAGACTGCAAAAGATTGGAAACATCCGAGTGATGGCTAGATCTTCCCCATTTGACAAGCTTCTTATGGTACAATGCTTGAAGAATCAAGGCCATGTAGTGGCAGTCACAGGGGATGGAACAAATGATGCCCCTGCTCTTCATGAGGCAGACATTGGCCTTTCCATGGGGATTCAAGGAACTGAAGTGGCAAAGGAGAGCTCCGACATCGTCATCTTGGACGATAACTTTACATCAGTCGTCACTGTCTTGAAATGGGGAAGATGTGTTTACAACAACATTCAGAAGTTCATTCAATTTCAGCTCACTGTGAATGTTGCAGCACTCATCGTAAACTTCATCGCCGCTGTCTCCTCCGGTAAAGTCCCATTAACAGCAGTTCAGTTACTATGGGTGAATCTCATAATGGACACCATGGGAGCTTTAGCCTTAGCCACTGAGCTACCCACCAACGATCTCATGATGAAAACACCGGTCGGTCGATCCGAGCCATTGGTGACGATAGTCATGTGGAGGAACCTCATTGCTCAGGCTGTGTATCAGGTGACAGTCTTACTGGTTTTGGAGTTCAAAGGAAGTTCTATCTTCAATGTGAATGAAAAGGTTAAGAGCACACTAATCTTCAACACTTTTGTTCTATGCCAAATCTTCAATGAGTTCAATGCAAGGAAGTTAGAGAAGAAGAATATATTTCAAGGGCTACACAAAAGCAAGCTCTTTTTGGCAATAATTGTGATAACCTTAGCTTTTCAAGTGGTAATGGTTGAGCTTTTGGGAAGATTTGCCAATACTGAGAGGTTGAATTGGGGCCAGTGGGGGGCATGTATTGGCATTGCAGCTTTGTCTTGGCCAATTGGATGGCTCTCCAAGTTAATACCAATTTCAGCCCTGAAATTTCCAAGGAGAAGAAATTCTGCACCATAA | 3078 | 45.0 | MALRCRKIDEIVEVFDREERPAMAKTHKRRWKMAFAAIYFTRVLISLSKKVTGRKSGALLRSLSYVALDVQSNHNDDSTDSREWPCMAAFSNVDRKVLSEMVREKNGECLNRFGGVHGLATLLKTNTRSGIGATEDDLIFRKSAFGTNTYSKLPGRSFFSFVIEAFNDTTIIILLICAALSLGFGIKQHGWDNGWYDGGSIVIAIFLVVVVSAASNFKQSRQFEKLSNERDDIKIEVTRAGRRKPVSIFELLVGDIVYLKIGDQIPADGVFLDGHSLKIDESSMTGESERVEVNHEINPFLLSGTKVSDGFGVMMVTSVGMNTAWGEMMSSIRREVNEETPLQARLNKMTAIIGKLGLTVAVLVLLVLLVRYFTGSTREFNGSKTRFDDVMNAVLGMVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADNAMVRKLSACETMGSATTICTDKTGTLTLNEMKVTEFWIGEDKIIDTDYSNSRIVSKVVELLHQAVGLNTTGGVQRPASLPLEIFGSPTEKAILTWAVFDLDLNLDELKKQYEIIQVETFSSEKKRSGVSMRRYGERAINTHWKGAAEMILAMCSYYYEKQGTARAIDDETRRQLTAVITTMAEKSLRCIAFAHKSNEEENLEVPSKLDESGLTLLGMVGLKDPCRPGVREAVESCRAAGVDIKMVTGDNLHTATAIAIECGILNLDVTTNSEIVVEGVQFRNYTPEERLQKIGNIRVMARSSPFDKLLMVQCLKNQGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIVILDDNFTSVVTVLKWGRCVYNNIQKFIQFQLTVNVAALIVNFIAAVSSGKVPLTAVQLLWVNLIMDTMGALALATELPTNDLMMKTPVGRSEPLVTIVMWRNLIAQAVYQVTVLLVLEFKGSSIFNVNEKVKSTLIFNTFVLCQIFNEFNARKLEKKNIFQGLHKSKLFLAIIVITLAFQVVMVELLGRFANTERLNWGQWGACIGIAALSWPIGWLSKLIPISALKFPRRRNSAP | 1025 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 4135405 | 4138610 | + | Tan0017395.1 | Tan08g0432 | 760324 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan08g0432 | 1025 | SUPERFAMILY | Calcium ATPase, transduction domain A | 235 | 331 | IPR008250 | - | |
| Tan08g0432 | 1025 | Gene3D | - | 448 | 800 | IPR023214 | - | |
| Tan08g0432 | 1025 | SFLD | C1.7: P-type atpase like | 433 | 808 | - | - | |
| Tan08g0432 | 1025 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 91 | 1012 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
| Tan08g0432 | 1025 | SUPERFAMILY | HAD-like | 449 | 859 | IPR036412 | - | |
| Tan08g0432 | 1025 | Pfam | E1-E2 ATPase | 234 | 429 | - | - | |
| Tan08g0432 | 1025 | Gene3D | - | 461 | 655 | IPR023299 | GO:0000166(InterPro) | |
| Tan08g0432 | 1025 | FunFam | Calcium-transporting ATPase | 211 | 333 | - | - | |
| Tan08g0432 | 1025 | Pfam | Cation transporting ATPase, C-terminus | 840 | 1010 | IPR006068 | - | |
| Tan08g0432 | 1025 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 114 | 1014 | IPR023298 | - | |
| Tan08g0432 | 1025 | Pfam | Cation transporter/ATPase, N-terminus | 114 | 181 | IPR004014 | - | |
| Tan08g0432 | 1025 | PRINTS | P-type cation-transporting ATPase superfamily signature | 280 | 294 | - | - | |
| Tan08g0432 | 1025 | PRINTS | P-type cation-transporting ATPase superfamily signature | 670 | 680 | - | - | |
| Tan08g0432 | 1025 | PRINTS | P-type cation-transporting ATPase superfamily signature | 779 | 791 | - | - | |
| Tan08g0432 | 1025 | PRINTS | P-type cation-transporting ATPase superfamily signature | 755 | 774 | - | - | |
| Tan08g0432 | 1025 | PRINTS | P-type cation-transporting ATPase superfamily signature | 648 | 659 | - | - | |
| Tan08g0432 | 1025 | PRINTS | P-type cation-transporting ATPase superfamily signature | 451 | 465 | - | - | |
| Tan08g0432 | 1025 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 453 | 459 | IPR018303 | - | |
| Tan08g0432 | 1025 | Gene3D | - | 134 | 333 | - | - | |
| Tan08g0432 | 1025 | Pfam | haloacid dehalogenase-like hydrolase | 449 | 769 | - | - | |
| Tan08g0432 | 1025 | PRINTS | H+-transporting ATPase (proton pump) signature | 606 | 624 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan08g0432 | 1025 | PRINTS | H+-transporting ATPase (proton pump) signature | 787 | 812 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan08g0432 | 1025 | PRINTS | H+-transporting ATPase (proton pump) signature | 755 | 771 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan08g0432 | 1025 | PANTHER | CATION TRANSPORTING ATPASE | 83 | 1012 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) | |
| Tan08g0432 | 1025 | NCBIfam | HAD-IC family P-type ATPase | 395 | 489 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan08g0432 | 1025 | NCBIfam | HAD-IC family P-type ATPase | 726 | 837 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan08g0432 | 1025 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 457 | 660 | IPR023299 | GO:0000166(InterPro) | |
| Tan08g0432 | 1025 | SFLD | p-type atpase | 433 | 808 | IPR044492 | - | |
| Tan08g0432 | 1025 | Gene3D | - | 164 | 1007 | - | - | |
| Tan08g0432 | 1025 | FunFam | Calcium-transporting ATPase | 772 | 1014 | - | - | |
| Tan08g0432 | 1025 | FunFam | Calcium-transporting ATPase | 649 | 800 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan02g0469 | Tan-Chr2:4359425 | Tan08g0432 | Tan-Chr8:4135405 | 3.70E-105 | dispersed | |
| Tan02g0470 | Tan-Chr2:4359425 | Tan08g0432 | Tan-Chr8:4135405 | 1.00E-110 | dispersed | |
| Tan06g1030 | Tan-Chr6:9257098 | Tan08g0432 | Tan-Chr8:4135405 | 0.00E+00 | dispersed | |
| Tan08g0432 | Tan-Chr8:4135405 | Tan08g0905 | Tan-Chr8:12498995 | 1.20E-284 | dispersed | |
| Tan08g0432 | Tan-Chr8:4135405 | Tan01g4694 | Tan-Chr1:112877771 | 3.00E-227 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan08g0432 | K01537 | - | csv:101218531 | 1619.36 |