Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0454 ATGAAATTCTACACTTCTTGGGTTGATATTGCCAATAGAAACATCAATTTTGTTACTGAAATGTTCACTTCTGGCACTCTTAGACAGTATAGGCTGAAGCATAAGAGAGTTAATATTAGAGCAGTGAAGCATTGGTGCAGGCAGATTTTGAGGGGGCTTCATTATTTGCATAGCCATGAGCCTCCTGTAATCCATAGAGATCTCAAATGTGACAATATCTTTGTTAATGGGAATCAAGGGGAAGTTAAGATTGGTGATCTAGGACTTGCAGCAATCCTCAGGAAATCTCATGCTGATCATTGTGTAGGGACACCAGAGTTTATGGCTCCAGAAGTGTATGCAGAGGCATATAATGAATTAGTTGATATTTACTCATTTGGAATGTGCATTCTGGAGATGATAACTTTTGAATATCCATACAGCGAATGCACTCATCCCGCTCAGATCTACAAGAAAGTCATATCCGGGAAAAAACCAGATGCCTTGTACAAAGTGAAGGATCCCGAAGTGCGGCAGTTCATCGATAAGTGTTTGGCAACGGTTTCATTTAGGCTCTCGGCAGCAGAGCTTTTGAATGACCCTTTTCTTCAAATTGATAATGGTGAATATGATCTAAGACCTGTCGATTACGGGAGAGGATTGGACGACGTTTGCCCTCTTATACGACAGCCTTATCTAGAACTTCATAGAAGTGACAGCTATTTTTGTAATGGATATCCATATGATTATAGTTTTGAAGCTTCAAGTGAATCTGGTTATCATCCAATTGATAATGAAACCAATGGAATTGAACTTTTTGAGTATTGTGAAGGTGAACATTCTGAAGATGTTGATATTAGCATTAAAGGGAAGATGAGAGAAGGTGGTGGCATCTTCTTAAGACTCAGAATTGCAGATAAAGAAGGGCGGATTAGGAACATTTATTTCCCATTTGATGTCGAGACGGATACAGCATTAAGTGTTGCAACAGAAATGGTAGCAGAGCTGGATATTACAGATCAAGACGTGACCAGAATTGCTGATATGATCGACGGAGAAATCGCCTCCTTAGTGCCTGAATGGAGGCCGGGTCCAGGAATTGAAGAGACGCCCCGCTTTGCAAATCAAAGCTATTGTCATAAGTGTGCTACTACTACATACAACAATGCTTCAAATGGTGTTTTGTTGAGAAATCCTGATGGAAAGAGCTCAGAGGTAGCTCAATGCTGTGGACATCGATATGCATCGGTGCATGGTCGCTTTGAGGAGATAATGTATCAAGCTGACGAGTCCGAGCATCATCCAGTAGAGGGTGCACCGAATATATCGAGCCATTCCGATTGCCTGAATTATCCTGAAATATGGGGAAATCACGAAAGCCGTGAACTTAGTTCAATGAGCTCAAGACACAGCCATTCGGATGAAGATTACGAGAAAACAGATCGACCAGTTACGGTCACGGACACAAAAGAAATGATCATGGAAAGTAAAACTGCTCCTAATACAAGAACTTCGCTTAGGGACCTAATGAATTCCCTTTCTTTCTCAGAAACCCCTTCATTATATGGACATCCAAATATTTATGAAAATGATGCCCAGCAAGAAATGAGATGGATCAAGGCAAAGTACCAAATTGAATTAACAGAGCTCAGAGATCAACAGTTAAGGCTTTTGTCAAAATCCTCAAATTCTGAGGACAGACAACAAAAAATGGAAAATGGGACACTGCTAGGCAACCACAACCAAAATCTCGACAGGTCTGCTCGAGACACAAACCGAAGTAGTACCGATAGCTATGTTTATATCAGTAATAGCTGTTACAGTTCAGATGCCCAAATGGTCCGAAATCGCAAGGTTGTGGAATCCCCTATTGTGGAGAAAGTAGTCACTGCTAAAAATGCCTGCAATGGCTCATTGCTTCCAAGCTCTCTTCATAGAACAATCTCTCTCCCTGTTGATGCTGTTCATATATAA 1953 40.96 MKFYTSWVDIANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILRGLHYLHSHEPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHADHCVGTPEFMAPEVYAEAYNELVDIYSFGMCILEMITFEYPYSECTHPAQIYKKVISGKKPDALYKVKDPEVRQFIDKCLATVSFRLSAAELLNDPFLQIDNGEYDLRPVDYGRGLDDVCPLIRQPYLELHRSDSYFCNGYPYDYSFEASSESGYHPIDNETNGIELFEYCEGEHSEDVDISIKGKMREGGGIFLRLRIADKEGRIRNIYFPFDVETDTALSVATEMVAELDITDQDVTRIADMIDGEIASLVPEWRPGPGIEETPRFANQSYCHKCATTTYNNASNGVLLRNPDGKSSEVAQCCGHRYASVHGRFEEIMYQADESEHHPVEGAPNISSHSDCLNYPEIWGNHESRELSSMSSRHSHSDEDYEKTDRPVTVTDTKEMIMESKTAPNTRTSLRDLMNSLSFSETPSLYGHPNIYENDAQQEMRWIKAKYQIELTELRDQQLRLLSKSSNSEDRQQKMENGTLLGNHNQNLDRSARDTNRSSTDSYVYISNSCYSSDAQMVRNRKVVESPIVEKVVTAKNACNGSLLPSSLHRTISLPVDAVHI 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4363657 4367560 + Tan0009603.1 Tan08g0454 760346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0454 650 Gene3D Transferase(Phosphotransferase) domain 1 22 201 - -
Tan08g0454 650 Pfam Protein kinase domain 6 196 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0454 650 Gene3D - 289 356 - -
Tan08g0454 650 FunFam probable serine/threonine-protein kinase WNK9 22 201 - -
Tan08g0454 650 FunFam probable serine/threonine-protein kinase WNK9 289 373 - -
Tan08g0454 650 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 552 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Tan08g0454 650 SUPERFAMILY Protein kinase-like (PK-like) 11 197 IPR011009 -
Tan08g0454 650 MobiDBLite consensus disorder prediction 552 588 - -
Tan08g0454 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 63 75 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0454 650 MobiDBLite consensus disorder prediction 455 476 - -
Tan08g0454 650 MobiDBLite consensus disorder prediction 552 578 - -
Tan08g0454 650 SMART serkin_6 1 196 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0454 650 MobiDBLite consensus disorder prediction 456 476 - -
Tan08g0454 650 ProSiteProfiles Protein kinase domain profile. 1 196 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0454 650 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 292 347 IPR024678 GO:0004674(InterPro)|GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0454 Tan-Chr8:4363657 Tan09g0381 Tan-Chr9:35389756 4.50E-168 dispersed
Tan08g0454 Tan-Chr8:4363657 Tan05g2466 Tan-Chr5:75814122 3.00E-10 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67927 PF00069 Pkinase 7.10E-38 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0454 K08867 - csv:101219552 1169.45