Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan08g0492 | ATGTTGAGATTCCATGTGGGCGGGAAGGTGGTCGAGAGAGTTGACTTGTTGAGGAAGAAACACTGGACATGGCGGTTGGATCTGTGGCCATTCGCCATTCTTTATGCGTCCTGGCTTGCCGTCGTTGTTCCCAGTATAGACTTTGGGGATGCTTTCATTGTTTTAGGTGGACTTGTGGCTTTTCATGTTCTGGTCTTGCTTTTCACTGCTTGGTCGGTTGATTTCAAATGTTTCGTCCAGTACAGTCAGGTTAATGATATTTATCAAGCTGATACGTGCAAGATAGTTCCAGCAAAATTCTCGGGCTCGAAAGAAATTGTTTTGCTTCATTTTCGTAAGCTTCTGGCAGGTTCTGCGTCTGCAGTGGATGTTGAGGAGATCTACTTTGATTTCAGAAAACAGCGATTTATTTATTCAAAGGAAAAGGAAACTTTCTGCAAGCTTCCTTATCCAACAAAAGAAACTTTTGGTTATTATCTAAAGAGTACTGGCTATGGCTCCGAGCCTAAAGTTGTAGCTGCCGTTGAAAAATGGGGGCGCAATATATTCGAGTATCCACAACCTACGTTCCAGAAATTAATGAAAGAGCAGTGTATGGAACCATTTTTTGTGTTTCAGGTTTTTTGTGTGGGGTTATGGTGTTTGGATGAGTATTGGTATTACAGCCTGTTTACTCTGTTTATGCTGTTTATGTTTGAGTCAACAATGGCAAAAAGTCGGTTGAAGACCTTAAGTGAGTTAAGACGTGTCAGAGTGGATACTCAGACCTTAATGGTGCATCGTTGTGGAAAGTGGACGAAACTACCTGGAACTGAGCTTTTGCCTGGAGATGTTGTCTCCATTGGGCGTGATTCTGGTCAGAGTGGTGAAGATAAATCTGTACCTGCTGATATGCTTATATTGGCTGGAAGTGCTATTGTTAACGAAGCCATTCTTACTGGGGAGTCCACACCACAATGGAAGGTTTCAATATCTGGGAGAGGAATCGAGGAGAAGTTATCATCTAAGAGAGACAAAAGTCATATGTTATTTGGTGGAACCAAAATATTGCAGCATACTCCAGATAAGACCTTTTCTCTTAGAACCCCTGATGGTGGCTGCCTAGCAGTTGTTTTGAGAACTGGATTCGAAACAAGTCAAGGGAAACTAATGCGCACAATTTTGTTTTCTACAGAGAGGGTTACAGCTAACAGTTGGGAAAGTGGCCTATTTATTTTGTTCTTGGTTGTATTTGCAGTTATAGCTGCTGGTTACGTTCTTGTAAAGGGGTTGGAAGATCCCACGAGAAGCAAGTACAAGCTTTTCCTTAGTTGCTCACTTATAATCACTTCTGTTATTCCTCCTGAACTGCCAATGGAACTGTCAATAGCCGTTAATACATCGCTAATTGCTCTGGCACGTCGTGGAATCTTTTGTACAGAGCCTTTCCGAATACCATTTGCTGGAAAGGTTGATATTTGTTGTTTCGATAAAACTGGAACGTTGACTTCAGATGACATGGAGTTTCGAGGAGTAGTTGGATTGAGTGATAAGGAGGATTTGGAAACTGACATGACTAGTGTGTCTTTGCGCACAGTTGAAATTCTGGCTTCTTGCCATGCATTGGTGTTTGTGGACAACAAGTTGGTGGGCGATCCCCTTGAAAAGGCTGCACTGAAGGGAGTTGATTGGACTTACAAATCTGATGAAAAAGCCATTCCCAGAAAGGGAAGTGGCCATGCCGTCCAGATTGTTCAGAGGCACCACTTTGCTTCACATTTAAAGAGAATGGCCGTTGTTGTGCGCCTTCAAGAGGAATTTTTTGCATTTGTGAAGGGTGCCCCGGAAACCATCCAGGAGAGGCTCACCGATACACCTTCATTTTATGTTGAGACGTATAAGAAATATACACGACAAGGTTCCCGTGTCCTTGCTCTTGCTTACAAATCACTTCCAGACATGACAGTTAGTGAAGCTAGAGGCCTGGATAGGGACTTGGTGGAGAGTGACCTTACATTTGCTGGTTTTGCGGTGTTCAATTGTCCAATTAGAGCAGATTCAGCTACAGTATTATCTGAGCTTAAAGGATCATCCCATGACTTGGTAATGATTACTGGTGACCAAGCTTTAACAGCGTGCCACGTAGCTAGCCAGGTTCATATTACCTCAAAGCAGATTTTAATTCTCAATTCAAAGAAGGGAACTGAGGAATATGAATGGCTCTCCCCAGATGAGTTACAGACAGTTCCCTACAGAGAGAAAGAGGTGGGAAATTTATCGGAGACATATGATCTGTGTATTGGAGGTGGCTGCATCGAAATGCTACAACGCACCTCCACTGTGCTGGATGTTATTCCATACGTTAAGGTTTTTGCAAGAGTTGCTCCGGAGCAGAAAGAACTCATATTGACCACGTTCAAAACAGTTGGAAGAATGACGTTGATGTGCGGGGATGGAACAAACGATGTTGGAGCTTTGAAGCAGGCCCATGTAGGAATTGCTCTCCTAAACGCAGTACCCCCTCCTCAAAGTGGTAACTCTTCTTCAGAAGCATCTAAAGATGAGGCTGTACGGTCTGCAAAGTCAAAGAAATCTAAGCCTTCATCCGAATCATCCGGAAAAGCACTGGTAAGTGGAGAAGGTTCTTCAAAAAGCAAAGTTGGTGCAAAACTGGATTCCGTTGCTGAGCAAGCTAGTAACCGTCCAAGGACACCTGCAGAGATGCAAAGACAAAAGCTAAAGAAACTGATGGATGAGTTAAATGAAGAAGGCGACGGGCGTTCTGCCCCTATTGTCAAGCTTGGGGATGCATCCATGGCATCGCCATTCACCGCAAAGCATGCTTCTGTTGCCCCTACTACCGACATTATTCGCCAAGGTCGAAGTACTCTAGTGACAACTCTCCAGATGTTTAAAATACTCGGTCTCAACTGCCTCGCTACTGCCTATGTTCTGAGTGTTATGTATTTGGATGGTGTAAAGCTTGGCGACATTCAAGCAACAATCAGTGGAGTATTCACAGCAGCCTTTTTTCTCTTCATCTCACATGCGCGCCCCCTTCCAACACTTTCAGCTGAACGGCCCCATCCACACATCTTTTGCTCTTACGTTCTCCTTTCTCTGCTAGGCCAATTTGCAATCCACTTATTGTTCTTGATTTCTTCAGTGAAAGAAGCTGAAAAGCACATGCCTGATGAATGCATAGAGCCAGACTCAGACTTTCATCCCAACTTGGTTAACACAGTTTCGTACATGGTAAGCATGATGCTTCAGGTAGCTACCTTTGCTGTGAACTACATGGGTCATCCCTTCAACCAGAGTGTATCTGAAAACAAACCGTTCTTATACGCTCTCTTGGCTGCGGTCGGTTTCTTCACTGTTATTACCTCCGATTTGTTCAGAGACTTGAATGACTGGCTGAAACTGGTTCCATTGCCAATGGGATTGAGGGACAAGCTTCTGGCTTGGGCACTTCTTATGTTCTTGTGCTGTTATTCTTGGGAAAGACTGTTGAGATGGATGTTCCCAGGTAAAATCCCGGCGTGGCGGAAGCGACAACTGGTAGCGGCTAATCTGGAGAAGAAGAAGCAGCTCTGA | 3576 | 44.1 | MLRFHVGGKVVERVDLLRKKHWTWRLDLWPFAILYASWLAVVVPSIDFGDAFIVLGGLVAFHVLVLLFTAWSVDFKCFVQYSQVNDIYQADTCKIVPAKFSGSKEIVLLHFRKLLAGSASAVDVEEIYFDFRKQRFIYSKEKETFCKLPYPTKETFGYYLKSTGYGSEPKVVAAVEKWGRNIFEYPQPTFQKLMKEQCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLSELRRVRVDTQTLMVHRCGKWTKLPGTELLPGDVVSIGRDSGQSGEDKSVPADMLILAGSAIVNEAILTGESTPQWKVSISGRGIEEKLSSKRDKSHMLFGGTKILQHTPDKTFSLRTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLVKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFRGVVGLSDKEDLETDMTSVSLRTVEILASCHALVFVDNKLVGDPLEKAALKGVDWTYKSDEKAIPRKGSGHAVQIVQRHHFASHLKRMAVVVRLQEEFFAFVKGAPETIQERLTDTPSFYVETYKKYTRQGSRVLALAYKSLPDMTVSEARGLDRDLVESDLTFAGFAVFNCPIRADSATVLSELKGSSHDLVMITGDQALTACHVASQVHITSKQILILNSKKGTEEYEWLSPDELQTVPYREKEVGNLSETYDLCIGGGCIEMLQRTSTVLDVIPYVKVFARVAPEQKELILTTFKTVGRMTLMCGDGTNDVGALKQAHVGIALLNAVPPPQSGNSSSEASKDEAVRSAKSKKSKPSSESSGKALVSGEGSSKSKVGAKLDSVAEQASNRPRTPAEMQRQKLKKLMDELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDIQATISGVFTAAFFLFISHARPLPTLSAERPHPHIFCSYVLLSLLGQFAIHLLFLISSVKEAEKHMPDECIEPDSDFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSVSENKPFLYALLAAVGFFTVITSDLFRDLNDWLKLVPLPMGLRDKLLAWALLMFLCCYSWERLLRWMFPGKIPAWRKRQLVAANLEKKKQL | 1191 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 4736391 | 4754170 | + | Tan0012282.2 | Tan08g0492 | 760384 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan08g0492 | 1191 | ProSitePatterns | Hypothetical cof family signature 2. | 809 | 831 | - | - | |
| Tan08g0492 | 1191 | Gene3D | - | 483 | 668 | IPR023299 | GO:0000166(InterPro) | |
| Tan08g0492 | 1191 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 494 | 678 | IPR023299 | GO:0000166(InterPro) | |
| Tan08g0492 | 1191 | SUPERFAMILY | HAD-like | 483 | 834 | IPR036412 | - | |
| Tan08g0492 | 1191 | FunFam | Cation-transporting ATPase | 669 | 844 | - | - | |
| Tan08g0492 | 1191 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 490 | 496 | IPR018303 | - | |
| Tan08g0492 | 1191 | SFLD | Haloacid Dehalogenase | 469 | 955 | - | - | |
| Tan08g0492 | 1191 | MobiDBLite | consensus disorder prediction | 830 | 903 | - | - | |
| Tan08g0492 | 1191 | Pfam | E1-E2 ATPase | 257 | 468 | - | - | |
| Tan08g0492 | 1191 | CDD | P-type_ATPase_cation | 170 | 1107 | IPR047820 | - | |
| Tan08g0492 | 1191 | Pfam | Cation transport ATPase (P-type) | 540 | 617 | - | - | |
| Tan08g0492 | 1191 | PRINTS | P-type cation-transporting ATPase superfamily signature | 690 | 700 | - | - | |
| Tan08g0492 | 1191 | PRINTS | P-type cation-transporting ATPase superfamily signature | 308 | 322 | - | - | |
| Tan08g0492 | 1191 | PRINTS | P-type cation-transporting ATPase superfamily signature | 809 | 828 | - | - | |
| Tan08g0492 | 1191 | PRINTS | P-type cation-transporting ATPase superfamily signature | 488 | 502 | - | - | |
| Tan08g0492 | 1191 | SUPERFAMILY | Calcium ATPase, transduction domain A | 256 | 387 | IPR008250 | - | |
| Tan08g0492 | 1191 | Gene3D | - | 224 | 388 | - | - | |
| Tan08g0492 | 1191 | FunFam | Cation-transporting ATPase | 226 | 388 | - | - | |
| Tan08g0492 | 1191 | PANTHER | CATION-TRANSPORTING ATPASE-RELATED | 9 | 1168 | IPR006544 | GO:0006874(PANTHER)|GO:0015662(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0019829(PANTHER)|GO:0030176(PANTHER)|GO:0055085(PANTHER)|GO:0140358(InterPro) | |
| Tan08g0492 | 1191 | MobiDBLite | consensus disorder prediction | 847 | 861 | - | - | |
| Tan08g0492 | 1191 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 167 | 1169 | IPR023298 | - | |
| Tan08g0492 | 1191 | FunFam | Cation-transporting ATPase | 484 | 668 | - | - | |
| Tan08g0492 | 1191 | NCBIfam | HAD-IC family P-type ATPase | 403 | 517 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan08g0492 | 1191 | NCBIfam | HAD-IC family P-type ATPase | 774 | 828 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan08g0492 | 1191 | NCBIfam | HAD-IC family P-type ATPase | 573 | 714 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan08g0492 | 1191 | Gene3D | - | 669 | 847 | IPR023214 | - | |
| Tan08g0492 | 1191 | Coils | Coil | 896 | 916 | - | - | |
| Tan08g0492 | 1191 | NCBIfam | ATP13A2 family polyamine export P-type ATPase | 40 | 1149 | IPR006544 | GO:0016020(InterPro)|GO:0140358(InterPro) | |
| Tan08g0492 | 1191 | SFLD | p-type atpase | 469 | 955 | IPR044492 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan08g0491 | Tan-Chr8:4736391 | Tan08g0492 | Tan-Chr8:4736391 | 0.00E+00 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan08g0492 | K14950 | - | csv:101215828 | 2264.57 |