Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0555 ATGCAAGATATCTTCGCTTCTGTTCGCCGATCATTGGTGTTTCGCGCTCCTGTTGACAATGAGGATTCGCATTCCCCTGCAATTGGAGTTGGAGCCCTAGTTGATAAGATCAACTCCAGTATTAGAAAATCCAGAGTGTTTTCTAGGCACTCGCCGTCGTCCTCGGCTCTGCCTCCGATTCCCAAGGACACTGAGCCTCCGATTCGATGGCGCAAGGGCGAGTTGATTGGCTGCGGCGCCTTTGGTCGGGTCTATATGGGCATGAATCTTGGCTCTGGCGAGCTTATCGCTGTTAAACAGGTTCTGATTGCGGCAAATGGCGCTTCGAAGGAGAAAGCGCAGGCTCATGTTAAGGAGCTTGAGGAAGAAGTGAAACTTCTCAAGGATCTGTCTCATCCAAATATTGTTAGATATTTGGGCACAGTTAGGGAGGATGATTCTTTAAATATATTATTGGAATTTGTCCCTGGTGGATCGATATCATCACTTTTGGGGAAATTTGGAGCCTTCCCTGAAGCAGTTATAAGAACATATACGAAACAGTTATTACTCGGATTGGAATATTTACACAAGAATGGTATCATGCACAGGGATATTAAGGGGGCGAATATTCTTGTAGATAACAAGGGATGCATTAAGCTTGCTGATTTTGGTGCATCAAAACAGGTTGTCGAGCTGGCTACAATTTCAGGTGCGAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTAATTCTGCAGACTGGGCATAGTTTCTCTGCGGATATATGGAGTGTTGGATGCACTGTTATTGAGATGGCTACAGGAAAGCCTCCTTGGAGCCAACAGTATCAAGAGGTCGCTGCTCTTTTTCATATAGGCACAACAAAGTCTCATCCACCAATCCCCGAGCAGCTTTCGGTTGAAGCTAAAGATTTTCTGTTGAAATGTTTGCAGAAGGAACCAAACTTAAGACCAGCTGCATCTGAACTCCTGAAGCATCCTTTTGTTACTGGGGAGGAAGCAGAATCTCAAGTTGTATCACGTGATGCGTGCACGGAGCCCTTGGAAATCCATTCACCTTTTTATACTCCAAACCTTGAAATGAGCAAAACTCCAACGCATCCTGGATCAAGTGATATTTGTAATTTGGATAGTCTCAGCTGCTCAAAAGTATACACTGCAAGCAAACTAGAAAATGATATGTGGGGAACAAACAACGGTGATGATGAAATGTGTCAGATTGATGACAAGGATGATTTTATGTTAGATGAAGTAAAACTCAGGTCTTCTATTGTACCTGAGAACATCAAGAGTTATAACCCAATCTGTGAGCCGTCCGATGATGAGGACTGCAAATTTGATCAAAGTCCAGTAGTAAATCAAGGAAGCAATTTAGATGAGCAAGCTCTTGCACCTGGCAGCTGTTCTGGAGTTTTTGATGATGACCAAAACTTCTCATTTCCTAGTGGACGATCACTTTCTGAAGATGAGGATGAGCTTACTGAATCTAAAATTAAAGCTTTCTTGGATGAGAAGGCTCTTGAATTGAAGAAACTGCAGTCACCACTATATGAGGAGTTCTACAATAGTTTGAATGCATCCTGCTCTCCAGTTTTTATAGAGAGTAACCAAGATGAAAGTACTCCTAAATACTTGAAATTGCCCCCCAAAAGTCGGTCACCAAGTCGGAGTCCCGGTAATCCATCCCCAGCACTTGATGCTTTTGGCACTGGGAGCCCAGGGAGCGGTAGCAGGGGTAATGCAAATGATCAGAGGTCACAACTCAACGATTGGAAGGGACTTCTAGTTGATGGTCAGTCAGAAGCTGGTAGCCCGAGTAAACATTATTCTGAAATACAGAGGAAGTGGAAAGAAGAGCTTGATCAAGAGCTTGAGAGAAAACGAGAGATGATGCGTCAAGCTAGTGCGGGAGGCAAAACTTCATCTCCAAAGGATAAAGCGATGGGCAGGCAGAGAGAGCGGACGAGATTTGCATCTCCATTCCGGGATGATGCGTCGGGTGCTGGGAGGGAGAACAGGGAAAACTTCATCTCCTGA 2046 44.57 MQDIFASVRRSLVFRAPVDNEDSHSPAIGVGALVDKINSSIRKSRVFSRHSPSSSALPPIPKDTEPPIRWRKGELIGCGAFGRVYMGMNLGSGELIAVKQVLIAANGASKEKAQAHVKELEEEVKLLKDLSHPNIVRYLGTVREDDSLNILLEFVPGGSISSLLGKFGAFPEAVIRTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPEQLSVEAKDFLLKCLQKEPNLRPAASELLKHPFVTGEEAESQVVSRDACTEPLEIHSPFYTPNLEMSKTPTHPGSSDICNLDSLSCSKVYTASKLENDMWGTNNGDDEMCQIDDKDDFMLDEVKLRSSIVPENIKSYNPICEPSDDEDCKFDQSPVVNQGSNLDEQALAPGSCSGVFDDDQNFSFPSGRSLSEDEDELTESKIKAFLDEKALELKKLQSPLYEEFYNSLNASCSPVFIESNQDESTPKYLKLPPKSRSPSRSPGNPSPALDAFGTGSPGSGSRGNANDQRSQLNDWKGLLVDGQSEAGSPSKHYSEIQRKWKEELDQELERKREMMRQASAGGKTSSPKDKAMGRQRERTRFASPFRDDASGAGRENRENFIS 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5391703 5397305 + Tan0000513.1 Tan08g0555 760447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0555 681 FunFam Serine/threonine-protein kinase STE11 67 160 - -
Tan08g0555 681 SMART serkin_6 70 332 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0555 681 Pfam Protein kinase domain 71 332 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0555 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0555 681 MobiDBLite consensus disorder prediction 648 681 - -
Tan08g0555 681 MobiDBLite consensus disorder prediction 539 681 - -
Tan08g0555 681 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 45 335 IPR050538 -
Tan08g0555 681 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524(InterPro)
Tan08g0555 681 Coils Coil 103 130 - -
Tan08g0555 681 Gene3D Transferase(Phosphotransferase) domain 1 69 355 - -
Tan08g0555 681 MobiDBLite consensus disorder prediction 611 636 - -
Tan08g0555 681 ProSiteProfiles Protein kinase domain profile. 70 332 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0555 681 FunFam Mitogen-activated protein kinase kinase kinase 2 69 359 - -
Tan08g0555 681 Coils Coil 616 640 - -
Tan08g0555 681 MobiDBLite consensus disorder prediction 576 592 - -
Tan08g0555 681 MobiDBLite consensus disorder prediction 45 64 - -
Tan08g0555 681 SUPERFAMILY Protein kinase-like (PK-like) 69 371 IPR011009 -
Tan08g0555 681 CDD STKc_MAPKKK 69 332 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g0893 Tan-Chr5:7131630 Tan08g0555 Tan-Chr8:5391703 1.40E-45 dispersed
Tan06g2550 Tan-Chr6:78174735 Tan08g0555 Tan-Chr8:5391703 5.70E-208 dispersed
Tan07g0368 Tan-Chr7:7326783 Tan08g0555 Tan-Chr8:5391703 1.10E-71 dispersed
Tan08g0555 Tan-Chr8:5391703 Tan11g1341 Tan-Chr11:11645114 7.80E-54 dispersed
Tan08g0555 Tan-Chr8:5391703 Tan01g0227 Tan-Chr1:2023667 2.60E-73 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67934 PF00069 Pkinase 9.70E-72 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0555 K20606 - csv:101209358 1200.65