Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0618 ATGTCGACGGAGAGATTGATTTCCAGTGCTACAACTCCATCGGAAGCAGAGCCGCCGAGGTTGGTTTCAGCGTCGCATTCGTTCCGGCAATGTGGAGTACCGGCTAGGGTTTTCGAGGAACTGCCGATTGCTTCCATTGTATCGGTTTCGCGGCCGGATACTGGAGATATTAGTCCCTTGCTGTTATCTTACACCATTGAAATCCAATACAAACAGTTTAAATGGAGCTTAGTGAAGAAGGCATCACAAGTTCTTTATTTACATTTTGCGTTGAAGAGGCGCGCATTTATTGAAGAGCTTCATGAGAAACAAGAGCAGGTGAAAGAATGGCTTCACAATTTGGGAATAGTAGATCATACAGCAGTAGTCCATCATGATGACGAGTCTGATGATGGGGCTTTTCCTTTGCATGATGAACAAACTACAAGAAACAGGAATGTTCCTTCTGTTGCTGCTTTACCTATCATTAAGCCAGCGCTGGGAGGACAGCGGTCCGTTTCAGACAAGGCAAAGCTAGCAATGCAGGGTTACTTAAATCATTTTTTTGGGAACTTGGATATTGTAAATTCTCGTGAAGTCTGCAAATTTTTAGAAGTCTCCAAGATGTCATTTGTGAAAGAATATGGTCCAAAGTTGAAAGAGGGTTACCTAATGGTGAAGCATTTAAAACAACTCACAGGATCTGATTCTAGTATAAAATGTTTTGCATGTCATTGGTGCAGTTGCTGCGATTACAATTGGAAAAAGGTTTGGGCTGTTTTGAAACCAGGTTTCTTGGCCTTGGTTGCTGATCCCCTGGACACTAAACTCCTAGATATAATTGTTTTTGATATGCTACCAACATTAGAAGAAATGGAGGGATCCCAAGCATGCTTAGCATATCATGTCATGGAGCGCAACCCTTTACGTTATTCATTTAAGGTTAGATGCGGAAATGGGAACATAAAGTTCAGAACCACAAGTACTGCCAAAGTTAAAAAGTGGGTCTCGTCAATTAATGATGCTGGTTTTGGACACCAAGATGGCTGGTGTCACCCTCATCGCTTCGGTTCTTTTGCTCCTCAGAGAGGTTTGACTGATGATGAAAGCCAAGCTCAGTGGTTTATAGATGGACGGGGAGCTTTTGAAGCAATCGCTTGCTCTATTGAGGCTGCAAAATCAGAGATTTTCATCACTGGTTGGTGGCTTTGCCCTGAGCTTTATATGCGGCGTCCTTTTCATAATCATTCTTCTTCACGGCTTGATGCATTACTGGAAACAAAGGCAAAAGAAGGTGTCAAGATTTACATATTAATGTATAAGGAGGTTTCTATTGCTCTGAAAATTAACAGTATGTATAGTAAGAAGAGACTTCTAAATATTCACGAGAATATTAAGGTACTACGTTCTCCTGATCATATGTCAACTGGAATTTACTATTGGTCACATCACGAAAAACTTGTCATTGTTGATCACGGCATTTGCTTTATTGGAGGTTTGGATTTATGCTTTGGCCGCTATGATACAATGGAACATAAAGTGAGTGATTTCCCTCCTTATACATGGCCAGGAAAGGACTATTACAACCCAAGAGAATCTGAACCAAATTCTTGGGAAGACACAATGAAAGATGAATTGGAGCGGGAGAAGTGTCCTCGAATGCCGTGGCATGATGTTCACTGTGCTCTGTGGGGATCTCCATGCCGTGACATTGCTCGACACTTTGTTCAGAGGTGGAACCATGCAAAGAGAAACAAAGCCCCAAATGAAGAAAAAATACCTCTACTTATGCCCCAACATGACATGGTCCTTCCACATTACATGGGAAGAAGCACGGAATTGAGCTTCAAAAATGAAGACTGGGAGCAAGATCATCAGAAGCAGACTACAGAAGATTTCTTTTCCTCCTTATCACCACAGGAAGATATTCCATTACTTATGCCTCAGGAAGTTGGTGGACTTCCAGATTCTAACATGGAAACAAATAGCCTTTTCATGAATCACAATTTTTTCAATAAGCCCATGGAGATACAAAGAAGTGTTATGGATTCTTTTCAGGCATACAATGTTGAACCACTGACTCAATATGAACAAACAAATGGATTATTAGATGAATTTGGATTTTTGGATGAGTTTGGTGCTTTTGGTCATCCGAGGGAAGCTACTATTGATGCTCCGGCATATAAAGAAACTTCAGATGATTGGTTGGAAACTAAACACGACAACAATCGTGTTGTTTCTATAAACGAGGTCAAAGAAATAGGTCCTCTAACTACTAGCAATTGTCAGGTAATAAGAAGTGTCAGCCAGTGGTCAGCAGGAACAAACAAACCAGAAGCAAGTATCCATGCCGCTTATTGTTCTGCCATTCAAGAGGCGAAACACTTCATCTACATTGAGAACCAGTTTTTCATATCAGGTTTATCAGGGGATGAGACCATACAAAATCGGGTTCTGGAAGCACTATACCAACGTATATTGCTGGCTCATAAAGAACAAGAATGTTTCAGAGTTATTGTTGTGTTACCTCTCTTACCTGGATTTCAGGGTGGGTTAGATGATAATGGTGCAGCAACTGTCCGAGCCTTGATGCACTGGCAGTATCGTACAATTAGTTGGGAAAAAACTTCGATTTTGCACCGTCTCAATCTTATGCTGGGTCCTAAAACACAAGATTATATTTTGTTTTGTGGCCTTCGATCATATGGCAGACTTTATGATGGTGGTCCAATTGCCACAAATCAGGTGTATGTGCACAGCAAATTGATGATTATCGATGATTGTATTACCTTTATTGGTTCCTCCAATATTAATGATAGAAGTTTACTTGGATCCAGAGATTCTGAGATTGGGGTAATTATTGAGGATAAAGAGTTTGTTGATTCATTTATGAATGGAAAGCCTTGGAAGGCTGGAAAATTCGCTCATAGTCTACGATGCTCCCTGTGGTGCGAGCACCTCGGTCTTCATCTTGGAGAGGTCAGTAAAATCATTGATCCTATAGTGGAAGCAACTTACAAAGATTTATGGTTAGCTACCGCAAAGGAAAACACAACAATATATGAAGATGTCTTTTCTTGCATCCCCAATGACAACATAAACTCAAGATCGTCTTTACGCCAAAGTTTGACCGATTTGAAAGGAAAATTTGGTCATAACACAATAGATTTAGGAATAGCTGCTGAGAAGATAGAAAGCCATGAAAATGGGGAAGTAAAAATGATAGATCCAATGGAGAGACTGAAATGTATTAGAGGACATCTTGTCTGTTTCCCATTGAAGTTCATGTGGCAAGAAGATCTCAGACCAGGCTTCATTGAGAGTGAGTTTTATGCTGCCCCTCAAGTTTTTCATTGA 3336 40.65 MSTERLISSATTPSEAEPPRLVSASHSFRQCGVPARVFEELPIASIVSVSRPDTGDISPLLLSYTIEIQYKQFKWSLVKKASQVLYLHFALKRRAFIEELHEKQEQVKEWLHNLGIVDHTAVVHHDDESDDGAFPLHDEQTTRNRNVPSVAALPIIKPALGGQRSVSDKAKLAMQGYLNHFFGNLDIVNSREVCKFLEVSKMSFVKEYGPKLKEGYLMVKHLKQLTGSDSSIKCFACHWCSCCDYNWKKVWAVLKPGFLALVADPLDTKLLDIIVFDMLPTLEEMEGSQACLAYHVMERNPLRYSFKVRCGNGNIKFRTTSTAKVKKWVSSINDAGFGHQDGWCHPHRFGSFAPQRGLTDDESQAQWFIDGRGAFEAIACSIEAAKSEIFITGWWLCPELYMRRPFHNHSSSRLDALLETKAKEGVKIYILMYKEVSIALKINSMYSKKRLLNIHENIKVLRSPDHMSTGIYYWSHHEKLVIVDHGICFIGGLDLCFGRYDTMEHKVSDFPPYTWPGKDYYNPRESEPNSWEDTMKDELEREKCPRMPWHDVHCALWGSPCRDIARHFVQRWNHAKRNKAPNEEKIPLLMPQHDMVLPHYMGRSTELSFKNEDWEQDHQKQTTEDFFSSLSPQEDIPLLMPQEVGGLPDSNMETNSLFMNHNFFNKPMEIQRSVMDSFQAYNVEPLTQYEQTNGLLDEFGFLDEFGAFGHPREATIDAPAYKETSDDWLETKHDNNRVVSINEVKEIGPLTTSNCQVIRSVSQWSAGTNKPEASIHAAYCSAIQEAKHFIYIENQFFISGLSGDETIQNRVLEALYQRILLAHKEQECFRVIVVLPLLPGFQGGLDDNGAATVRALMHWQYRTISWEKTSILHRLNLMLGPKTQDYILFCGLRSYGRLYDGGPIATNQVYVHSKLMIIDDCITFIGSSNINDRSLLGSRDSEIGVIIEDKEFVDSFMNGKPWKAGKFAHSLRCSLWCEHLGLHLGEVSKIIDPIVEATYKDLWLATAKENTTIYEDVFSCIPNDNINSRSSLRQSLTDLKGKFGHNTIDLGIAAEKIESHENGEVKMIDPMERLKCIRGHLVCFPLKFMWQEDLRPGFIESEFYAAPQVFH 1111
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6290114 6300227 + Tan0003606.1 Tan08g0618 760510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0618 1111 MobiDBLite consensus disorder prediction 1 21 - -
Tan08g0618 1111 SUPERFAMILY Phospholipase D/nuclease 747 957 - -
Tan08g0618 1111 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 907 934 IPR001736 GO:0003824(InterPro)
Tan08g0618 1111 CDD PLDc_vPLD1_2_yPLD_like_1 365 509 - -
Tan08g0618 1111 SMART PH_update 211 339 IPR001849 -
Tan08g0618 1111 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 472 499 IPR001736 GO:0003824(InterPro)
Tan08g0618 1111 PANTHER PHOSPHOLIPASE D 191 1089 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Tan08g0618 1111 SUPERFAMILY Phospholipase D/nuclease 340 592 - -
Tan08g0618 1111 SMART pld_4 907 934 IPR001736 GO:0003824(InterPro)
Tan08g0618 1111 SMART pld_4 472 499 IPR001736 GO:0003824(InterPro)
Tan08g0618 1111 PIRSF PLD_euk 42 629 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Tan08g0618 1111 PIRSF PLD_euk 712 1111 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Tan08g0618 1111 Gene3D Endonuclease Chain A 357 602 - -
Tan08g0618 1111 FunFam Phospholipase 741 961 - -
Tan08g0618 1111 Gene3D Endonuclease Chain A 714 969 - -
Tan08g0618 1111 ProSiteProfiles PH domain profile. 210 337 IPR001849 -
Tan08g0618 1111 Pfam Phospholipase D Active site motif 474 499 IPR001736 GO:0003824(InterPro)
Tan08g0618 1111 SUPERFAMILY PH domain-like 205 340 - -
Tan08g0618 1111 CDD PLDc_vPLD1_2_yPLD_like_2 767 951 - -
Tan08g0618 1111 Gene3D - 203 337 IPR011993 -
Tan08g0618 1111 MobiDBLite consensus disorder prediction 1 18 - -
Tan08g0618 1111 CDD PH_PLD 188 335 - -
Tan08g0618 1111 Pfam PLD-like domain 909 956 IPR025202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2709 Tan-Chr6:79497338 Tan08g0618 Tan-Chr8:6290114 0.00E+00 dispersed
Tan08g0618 Tan-Chr8:6290114 Tan08g0620 Tan-Chr8:6292891 0.00E+00 dispersed
Tan08g0618 Tan-Chr8:6290114 Tan08g0619 Tan-Chr8:6290114 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0618 K01115 - csv:101220522 2088.54