Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0619 ATGTACAGGAATGTTCCTTCTGTTGCTGCTTTACCTATCATTAAGCCAGCGCTGGGAGGACAGCGGTCCGTTTCAGACAAGGCAAAGCTAGCAATGCAGGGTTACTTAAATCATTTTTTTGGGAACTTGGATATTGTAAATTCTCGTGAAGTCTGCAAATTTTTAGAAGTCTCCAAGATGTCATTTGTGAAAGAATATGGTCCAAAGTTGAAAGAGGGTTACCTAATGGTGAAGCATTTAAAACAACTCACAGGATCTGATTCTAGTATAAAATGTTTTGCATGTCATTGGTGCAGTTGCTGCGATTACAATTGGAAAAAGGTTTGGGCTGTTTTGAAACCAGGTTTCTTGGCCTTGGTTGCTGATCCCCTGGACACTAAACTCCTAGATATAATTGTTTTTGATATGCTACCAACATTAGAAGAAATGGAGGGATCCCAAGCATGCTTAGCATATCATGTCATGGAGCGCAACCCTTTACGTTATTCATTTAAGGTTAGATGCGGAAATGGGAACATAAAGTTCAGAACCACAAGTACTGCCAAAGTTAAAAAGTGGGTCTCGTCAATTAATGATGCTGGTTTTGGACACCAAGATGGCTGGTGTCACCCTCATCGCTTCGGTTCTTTTGCTCCTCAGAGAGGTTTGACTGATGATGAAAGCCAAGCTCAGTGGTTTATAGATGGACGGGGAGCTTTTGAAGCAATCGCTTGCTCTATTGAGGCTGCAAAATCAGAGATTTTCATCACTGGTTGGTGGCTTTGCCCTGAGCTTTATATGCGGCGTCCTTTTCATAATCATTCTTCTTCACGGCTTGATGCATTACTGGAAACAAAGGCAAAAGAAGGTGTCAAGATTTACATATTAATGTATAAGGAGGTTTCTATTGCTCTGAAAATTAACAGTATGTATAGTAAGAAGAGACTTCTAAATATTCACGAGAATATTAAGGTACTACGTTCTCCTGATCATATGTCAACTGGAATTTACTATTGGTCACATCACGAAAAACTTGTCATTGTTGATCACGGCATTTGCTTTATTGGAGGTTTGGATTTATGCTTTGGCCGCTATGATACAATGGAACATAAAGTGAGTGATTTCCCTCCTTATACATGGCCAGGAAAGGACTATTACAACCCAAGAGAATCTGAACCAAATTCTTGGGAAGACACAATGAAAGATGAATTGGAGCGGGAGAAGTGTCCTCGAATGCCGTGGCATGATGTTCACTGTGCTCTGTGGGGATCTCCATGCCGTGACATTGCTCGACACTTTGTTCAGAGGTGGAACCATGCAAAGAGAAACAAAGCCCCAAATGAAGAAAAAATACCTCTACTTATGCCCCAACATGACATGGTCCTTCCACATTACATGGGAAGAAGCACGGAATTGAGCTTCAAAAATGAAGACTGGGAGCAAGATCATCAGAAGCAGACTACAGAAGATTTCTTTTCCTCCTTATCACCACAGGAAGATATTCCATTACTTATGCCTCAGGAAGTTGGTGGACTTCCAGATTCTAACATGGAAACAAATAGCCTTTTCATGAATCACAATTTTTTCAATAAGCCCATGGAGATACAAAGAAGTGTTATGGATTCTTTTCAGGCATACAATGTTGAACCACTGACTCAATATGAACAAACAAATGGATTATTAGATGAATTTGGATTTTTGGATGAGTTTGGTGCTTTTGGTCATCCGAGGGAAGCTACTATTGATGCTCCGGCATATAAAGAAACTTCAGATGATTGGTTGGAAACTAAACACGACAACAATCGTGTTGTTTCTATAAACGAGGTCAAAGAAATAGGTCCTCTAACTACTAGCAATTGTCAGGTAATAAGAAGTGTCAGCCAGTGGTCAGCAGGAACAAACAAACCAGAAGCAAGTATCCATGCCGCTTATTGTTCTGCCATTCAAGAGGCGAAACACTTCATCTACATTGAGAACCAGTTTTTCATATCAGGTTTATCAGGGGATGAGACCATACAAAATCGGGTTCTGGAAGCACTATACCAACGTATATTGCTGGCTCATAAAGAACAAGAATGTTTCAGAGTTATTGTTGTGTTACCTCTCTTACCTGGATTTCAGGGTGGGTTAGATGATAATGGTGCAGCAACTGTCCGAGCCTTGATGCACTGGCAGTATCGTACAATTAGTTGGGAAAAAACTTCGATTTTGCACCGTCTCAATCTTATGCTGGGTCCTAAAACACAAGATTATATTTTGTTTTGTGGCCTTCGATCATATGGCAGACTTTATGATGGTGGTCCAATTGCCACAAATCAGGTGTATGTGCACAGCAAATTGATGATTATCGATGATTGTATTACCTTTATTGGTTCCTCCAATATTAATGATAGAAGTTTACTTGGATCCAGAGATTCTGAGATTGGGGTAATTATTGAGGATAAAGAGTTTGTTGATTCATTTATGAATGGAAAGCCTTGGAAGGCTGGAAAATTCGCTCATAGTCTACGATGCTCCCTGTGGTGCGAGCACCTCGGTCTTCATCTTGGAGAGGTCAGTAAAATCATTGATCCTATAGTGGAAGCAACTTACAAAGATTTATGGTTAGCTACCGCAAAGGAAAACACAACAATATATGAAGATGTCTTTTCTTGCATCCCCAATGACAACATAAACTCAAGATCGTCTTTACGCCAAAGTTTGACCGATTTGAAAGGAAAATTTGGTCATAACACAATAGATTTAGGAATAGCTGCTGAGAAGATAGAAAGCCATGAAAATGGGGAAGTAAAAATGATAGATCCAATGGAGAGACTGAAATGTATTAGAGGACATCTTGTCTGTTTCCCATTGAAGTTCATGTGGCAAGAAGATCTCAGACCAGGCTTCATTGAGAGTGAGTTTTATGCTGCCCCTCAAGTTTTTCATTGA 2910 40.03 MYRNVPSVAALPIIKPALGGQRSVSDKAKLAMQGYLNHFFGNLDIVNSREVCKFLEVSKMSFVKEYGPKLKEGYLMVKHLKQLTGSDSSIKCFACHWCSCCDYNWKKVWAVLKPGFLALVADPLDTKLLDIIVFDMLPTLEEMEGSQACLAYHVMERNPLRYSFKVRCGNGNIKFRTTSTAKVKKWVSSINDAGFGHQDGWCHPHRFGSFAPQRGLTDDESQAQWFIDGRGAFEAIACSIEAAKSEIFITGWWLCPELYMRRPFHNHSSSRLDALLETKAKEGVKIYILMYKEVSIALKINSMYSKKRLLNIHENIKVLRSPDHMSTGIYYWSHHEKLVIVDHGICFIGGLDLCFGRYDTMEHKVSDFPPYTWPGKDYYNPRESEPNSWEDTMKDELEREKCPRMPWHDVHCALWGSPCRDIARHFVQRWNHAKRNKAPNEEKIPLLMPQHDMVLPHYMGRSTELSFKNEDWEQDHQKQTTEDFFSSLSPQEDIPLLMPQEVGGLPDSNMETNSLFMNHNFFNKPMEIQRSVMDSFQAYNVEPLTQYEQTNGLLDEFGFLDEFGAFGHPREATIDAPAYKETSDDWLETKHDNNRVVSINEVKEIGPLTTSNCQVIRSVSQWSAGTNKPEASIHAAYCSAIQEAKHFIYIENQFFISGLSGDETIQNRVLEALYQRILLAHKEQECFRVIVVLPLLPGFQGGLDDNGAATVRALMHWQYRTISWEKTSILHRLNLMLGPKTQDYILFCGLRSYGRLYDGGPIATNQVYVHSKLMIIDDCITFIGSSNINDRSLLGSRDSEIGVIIEDKEFVDSFMNGKPWKAGKFAHSLRCSLWCEHLGLHLGEVSKIIDPIVEATYKDLWLATAKENTTIYEDVFSCIPNDNINSRSSLRQSLTDLKGKFGHNTIDLGIAAEKIESHENGEVKMIDPMERLKCIRGHLVCFPLKFMWQEDLRPGFIESEFYAAPQVFH 969
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6290114 6300227 + Tan0003606.2 Tan08g0619 760511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0619 969 CDD PH_PLD 46 193 - -
Tan08g0619 969 Gene3D - 61 195 IPR011993 -
Tan08g0619 969 PIRSF PLD_euk 1 487 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Tan08g0619 969 PIRSF PLD_euk 570 969 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Tan08g0619 969 SUPERFAMILY Phospholipase D/nuclease 605 815 - -
Tan08g0619 969 SUPERFAMILY Phospholipase D/nuclease 198 450 - -
Tan08g0619 969 FunFam Phospholipase 599 819 - -
Tan08g0619 969 Gene3D Endonuclease Chain A 572 827 - -
Tan08g0619 969 SMART pld_4 330 357 IPR001736 GO:0003824(InterPro)
Tan08g0619 969 SMART pld_4 765 792 IPR001736 GO:0003824(InterPro)
Tan08g0619 969 Pfam Phospholipase D Active site motif 332 357 IPR001736 GO:0003824(InterPro)
Tan08g0619 969 CDD PLDc_vPLD1_2_yPLD_like_2 625 809 - -
Tan08g0619 969 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 765 792 IPR001736 GO:0003824(InterPro)
Tan08g0619 969 PANTHER PHOSPHOLIPASE D 49 947 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Tan08g0619 969 SUPERFAMILY PH domain-like 63 198 - -
Tan08g0619 969 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 330 357 IPR001736 GO:0003824(InterPro)
Tan08g0619 969 SMART PH_update 69 197 IPR001849 -
Tan08g0619 969 CDD PLDc_vPLD1_2_yPLD_like_1 223 367 - -
Tan08g0619 969 Gene3D Endonuclease Chain A 215 461 - -
Tan08g0619 969 Pfam PLD-like domain 767 814 IPR025202 -
Tan08g0619 969 ProSiteProfiles PH domain profile. 68 195 IPR001849 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0618 Tan-Chr8:6290114 Tan08g0619 Tan-Chr8:6290114 0.00E+00 tandem
Tan08g0619 Tan-Chr8:6290114 Tan08g0620 Tan-Chr8:6292891 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0619 K01115 - csv:101220522 1830.07