Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0620 ATGCTACCAACATTAGAAGAAATGGAGGGATCCCAAGCATGCTTAGCATATCATGTCATGGAGCGCAACCCTTTACGTTATTCATTTAAGGTTAGATGCGGAAATGGGAACATAAAGTTCAGAACCACAAGTACTGCCAAAGTTAAAAAGTGGGTCTCGTCAATTAATGATGCTGGTTTTGGACACCAAGATGGCTGGTGTCACCCTCATCGCTTCGGTTCTTTTGCTCCTCAGAGAGGTTTGACTGATGATGAAAGCCAAGCTCAGTGGTTTATAGATGGACGGGGAGCTTTTGAAGCAATCGCTTGCTCTATTGAGGCTGCAAAATCAGAGATTTTCATCACTGGTTGGTGGCTTTGCCCTGAGCTTTATATGCGGCGTCCTTTTCATAATCATTCTTCTTCACGGCTTGATGCATTACTGGAAACAAAGGCAAAAGAAGGTGTCAAGATTTACATATTAATGTATAAGGAGGTTTCTATTGCTCTGAAAATTAACAGTATGTATAGTAAGAAGAGACTTCTAAATATTCACGAGAATATTAAGGTACTACGTTCTCCTGATCATATGTCAACTGGAATTTACTATTGGTCACATCACGAAAAACTTGTCATTGTTGATCACGGCATTTGCTTTATTGGAGGTTTGGATTTATGCTTTGGCCGCTATGATACAATGGAACATAAAGTGAGTGATTTCCCTCCTTATACATGGCCAGGAAAGGACTATTACAACCCAAGAGAATCTGAACCAAATTCTTGGGAAGACACAATGAAAGATGAATTGGAGCGGGAGAAGTGTCCTCGAATGCCGTGGCATGATGTTCACTGTGCTCTGTGGGGATCTCCATGCCGTGACATTGCTCGACACTTTGTTCAGAGGTGGAACCATGCAAAGAGAAACAAAGCCCCAAATGAAGAAAAAATACCTCTACTTATGCCCCAACATGACATGGTCCTTCCACATTACATGGGAAGAAGCACGGAATTGAGCTTCAAAAATGAAGACTGGGAGCAAGATCATCAGAAGCAGACTACAGAAGATTTCTTTTCCTCCTTATCACCACAGGAAGATATTCCATTACTTATGCCTCAGGAAGTTGGTGGACTTCCAGATTCTAACATGGAAACAAATAGCCTTTTCATGAATCACAATTTTTTCAATAAGCCCATGGAGATACAAAGAAGTGTTATGGATTCTTTTCAGGCATACAATGTTGAACCACTGACTCAATATGAACAAACAAATGGATTATTAGATGAATTTGGATTTTTGGATGAGTTTGGTGCTTTTGGTCATCCGAGGGAAGCTACTATTGATGCTCCGGCATATAAAGAAACTTCAGATGATTGGTTGGAAACTAAACACGACAACAATCGTGTTGTTTCTATAAACGAGGTCAAAGAAATAGGTCCTCTAACTACTAGCAATTGTCAGGTAATAAGAAGTGTCAGCCAGTGGTCAGCAGGAACAAACAAACCAGAAGCAAGTATCCATGCCGCTTATTGTTCTGCCATTCAAGAGGCGAAACACTTCATCTACATTGAGAACCAGTTTTTCATATCAGGTTTATCAGGGGATGAGACCATACAAAATCGGGTTCTGGAAGCACTATACCAACGTATATTGCTGGCTCATAAAGAACAAGAATGTTTCAGAGTTATTGTTGTGTTACCTCTCTTACCTGGATTTCAGGGTGGGTTAGATGATAATGGTGCAGCAACTGTCCGAGCCTTGATGCACTGGCAGTATCGTACAATTAGTTGGGAAAAAACTTCGATTTTGCACCGTCTCAATCTTATGCTGGGTCCTAAAACACAAGATTATATTTTGTTTTGTGGCCTTCGATCATATGGCAGACTTTATGATGGTGGTCCAATTGCCACAAATCAGGTGTATGTGCACAGCAAATTGATGATTATCGATGATTGTATTACCTTTATTGGTTCCTCCAATATTAATGATAGAAGTTTACTTGGATCCAGAGATTCTGAGATTGGGGTAATTATTGAGGATAAAGAGTTTGTTGATTCATTTATGAATGGAAAGCCTTGGAAGGCTGGAAAATTCGCTCATAGTCTACGATGCTCCCTGTGGTGCGAGCACCTCGGTCTTCATCTTGGAGAGGTCAGTAAAATCATTGATCCTATAGTGGAAGCAACTTACAAAGATTTATGGTTAGCTACCGCAAAGGAAAACACAACAATATATGAAGATGTCTTTTCTTGCATCCCCAATGACAACATAAACTCAAGATCGTCTTTACGCCAAAGTTTGACCGATTTGAAAGGAAAATTTGGTCATAACACAATAGATTTAGGAATAGCTGCTGAGAAGATAGAAAGCCATGAAAATGGGGAAGTAAAAATGATAGATCCAATGGAGAGACTGAAATGTATTAGAGGACATCTTGTCTGTTTCCCATTGAAGTTCATGTGGCAAGAAGATCTCAGACCAGGCTTCATTGAGAGTGAGTTTTATGCTGCCCCTCAAGTTTTTCATTGA 2505 40.12 MLPTLEEMEGSQACLAYHVMERNPLRYSFKVRCGNGNIKFRTTSTAKVKKWVSSINDAGFGHQDGWCHPHRFGSFAPQRGLTDDESQAQWFIDGRGAFEAIACSIEAAKSEIFITGWWLCPELYMRRPFHNHSSSRLDALLETKAKEGVKIYILMYKEVSIALKINSMYSKKRLLNIHENIKVLRSPDHMSTGIYYWSHHEKLVIVDHGICFIGGLDLCFGRYDTMEHKVSDFPPYTWPGKDYYNPRESEPNSWEDTMKDELEREKCPRMPWHDVHCALWGSPCRDIARHFVQRWNHAKRNKAPNEEKIPLLMPQHDMVLPHYMGRSTELSFKNEDWEQDHQKQTTEDFFSSLSPQEDIPLLMPQEVGGLPDSNMETNSLFMNHNFFNKPMEIQRSVMDSFQAYNVEPLTQYEQTNGLLDEFGFLDEFGAFGHPREATIDAPAYKETSDDWLETKHDNNRVVSINEVKEIGPLTTSNCQVIRSVSQWSAGTNKPEASIHAAYCSAIQEAKHFIYIENQFFISGLSGDETIQNRVLEALYQRILLAHKEQECFRVIVVLPLLPGFQGGLDDNGAATVRALMHWQYRTISWEKTSILHRLNLMLGPKTQDYILFCGLRSYGRLYDGGPIATNQVYVHSKLMIIDDCITFIGSSNINDRSLLGSRDSEIGVIIEDKEFVDSFMNGKPWKAGKFAHSLRCSLWCEHLGLHLGEVSKIIDPIVEATYKDLWLATAKENTTIYEDVFSCIPNDNINSRSSLRQSLTDLKGKFGHNTIDLGIAAEKIESHENGEVKMIDPMERLKCIRGHLVCFPLKFMWQEDLRPGFIESEFYAAPQVFH 834
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6292891 6300227 + Tan0003606.3 Tan08g0620 760512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0620 834 Pfam Phospholipase D Active site motif 197 222 IPR001736 GO:0003824(InterPro)
Tan08g0620 834 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 195 222 IPR001736 GO:0003824(InterPro)
Tan08g0620 834 Gene3D Endonuclease Chain A 80 328 - -
Tan08g0620 834 SUPERFAMILY Phospholipase D/nuclease 63 315 - -
Tan08g0620 834 FunFam Phospholipase 464 684 - -
Tan08g0620 834 PANTHER PHOSPHOLIPASE D 37 812 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Tan08g0620 834 SMART pld_4 195 222 IPR001736 GO:0003824(InterPro)
Tan08g0620 834 SMART pld_4 630 657 IPR001736 GO:0003824(InterPro)
Tan08g0620 834 CDD PLDc_vPLD1_2_yPLD_like_2 490 674 - -
Tan08g0620 834 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 630 657 IPR001736 GO:0003824(InterPro)
Tan08g0620 834 PIRSF PLD_euk 435 834 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Tan08g0620 834 PIRSF PLD_euk 2 351 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Tan08g0620 834 Pfam PLD-like domain 632 679 IPR025202 -
Tan08g0620 834 SUPERFAMILY Phospholipase D/nuclease 470 680 - -
Tan08g0620 834 CDD PLDc_vPLD1_2_yPLD_like_1 88 232 - -
Tan08g0620 834 Gene3D Endonuclease Chain A 437 692 - -
Tan08g0620 834 ProSiteProfiles PH domain profile. 1 60 IPR001849 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0618 Tan-Chr8:6290114 Tan08g0620 Tan-Chr8:6292891 0.00E+00 dispersed
Tan08g0619 Tan-Chr8:6290114 Tan08g0620 Tan-Chr8:6292891 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0620 K01115 - csv:101220522 1566.59