Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0633 ATGGTGGAGTTAGCTAAAGCTCATGCAAAGGCTTTAATGCCTTCATTTGGAGATGGTAAAGAAGATCAACGATTAATTGAGTCTCTCACACAAGACATAACTAATTTAATCAAGAAATCAGAGAAGGGACTCAAGAGACTCTCTGTAGCTGGACCTTCGGAAGATTCCAATATCAGAAAAAATGTCCAGCGATCTCTTGCCACTGACCTTCAGAACCTTTCCATGGAGCTTCGCAAGAAACAATCAACTTATTTAAAGCGCCTACGGCAGCAAAAAGAGGAAGTTCAAGATGGGATTGACATAGAGATGAATCGAAATGGAAATAGATCAAGACTGGAGGACGATGATTTAGAAGACATGGTATTTAATGAGCATCAAATGGCTAAGCTGCGAAAGAGTGAAGCATTCACTGCCGAAAGAGAGAAAGAGATCCAACATGTTGTAGAATCCGTGAATGAACTTGCTCAGATCATGAAGGATCTATCAGTTCTTGTTATAGACCAGGTTAAAGAAGATGCCCATATCCTTCATCCTGAAAGTTATTTCATGTATTGGTACATACTAATTGAACATACATACACATTCTTTCAACAGGGCACCATTATTGATAGAATAGATTATAATATTCAAAATGTTGCAACGACGGTCGATGAGGGCCTTAAGCAACTGCAGAAGGCGGAGAGAACACAGAAACAAGGAGGGATGGTAATGTGTGCGTCTGTGCTCATTATCATGTGCTTCGTCATGTTGGTTCTCTTGATCCTTAAAACCATACTATTTTGA 783 39.59 MVELAKAHAKALMPSFGDGKEDQRLIESLTQDITNLIKKSEKGLKRLSVAGPSEDSNIRKNVQRSLATDLQNLSMELRKKQSTYLKRLRQQKEEVQDGIDIEMNRNGNRSRLEDDDLEDMVFNEHQMAKLRKSEAFTAEREKEIQHVVESVNELAQIMKDLSVLVIDQVKEDAHILHPESYFMYWYILIEHTYTFFQQGTIIDRIDYNIQNVATTVDEGLKQLQKAERTQKQGGMVMCASVLIIMCFVMLVLLILKTILF 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6385332 6390099 + Tan0021761.4 Tan08g0633 760525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0633 260 SUPERFAMILY t-snare proteins 3 168 IPR010989 GO:0016020(InterPro)|GO:0016192(InterPro)
Tan08g0633 260 PANTHER SYNTAXIN 15 244 IPR045242 GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER)
Tan08g0633 260 CDD SNARE_syntaxin16 138 225 - -
Tan08g0633 260 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 197 226 IPR000727 -
Tan08g0633 260 Gene3D - 1 218 - -
Tan08g0633 260 Coils Coil 85 105 - -
Tan08g0633 260 Pfam SNARE domain 200 252 IPR000727 -
Tan08g0633 260 SUPERFAMILY SNARE fusion complex 195 231 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0630 Tan-Chr8:6385332 Tan08g0633 Tan-Chr8:6385332 5.20E-111 dispersed
Tan08g0631 Tan-Chr8:6385332 Tan08g0633 Tan-Chr8:6385332 5.20E-111 dispersed
Tan08g0632 Tan-Chr8:6385332 Tan08g0633 Tan-Chr8:6385332 5.10E-105 tandem
Tan08g0633 Tan-Chr8:6385332 Tan08g0634 Tan-Chr8:6385332 3.70E-129 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0633 K08489 - csv:101207998 400.979