Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan08g0634 | ATGGTGGAGTTAGCTAAAGCTCATGCAAAGGCTTTAATGCCTTCATTTGGAGATGGTAAAGAAGATCAACGATTAATTGAGTCTCTCACACAAGACATAACTAATTTAATCAAGAAATCAGAGAAGGGACTCAAGAGACTCTCTGTAGCTGGACCTTCGGAAGATTCCAATATCAGAAAAAATGTCCAGCGATCTCTTGCCACTGACCTTCAGAACCTTTCCATGGAGCTTCGCAAGAAACAATCAACTTATTTAAAGCGCCTACGGCAGCAAAAAGAGGAAGTTCAAGATGGGATTGACATAGAGATGAATCGAAATGGAAATAGATCAAGACTGGAGGACGATGATTTAGAAGACATGGTATTTAATGAGCATCAAATGGCTAAGCTGCGAAAGAGTGAAGCATTCACTGCCGAAAGAGAGAAAGAGATCCAACATGTTGTAGAATCCGTGAATGAACTTGCTCAGATCATGAAGGATCTATCAGTTCTTGTTATAGACCAGGTTAAAGAAGATGCCCATATCCTTCATCCTGAAAGTTATTTCATGTATTGGTACATACTAATTGAACATACATACACATTCTTTCAACAGGGCACCATTATTGATAGAATAGATTATAATATTCAAAATGTTGCAACGACGGTCGATGAGGGCCTTAAGCAACTGCAGAAGGTTAGTCCCGACTCCGAGTCACTAATTTCTTTCGGGTTTCAAAGAATTCTCAAAATATACCCCCATAAAAAATGTAGGAGAATCTCTCTGTTTCATTTTTGTGTTTACGTCGTCGTCGTGGTGCAGGCGGAGAGAACACAGAAACAAGGAGGGATGGTAATGTGTGCGTCTGTGCTCATTATCATGTGCTTCGTCATGTTGGTTCTCTTGATCCTTAAAACCATACTATTTTGA | 909 | 39.71 | MVELAKAHAKALMPSFGDGKEDQRLIESLTQDITNLIKKSEKGLKRLSVAGPSEDSNIRKNVQRSLATDLQNLSMELRKKQSTYLKRLRQQKEEVQDGIDIEMNRNGNRSRLEDDDLEDMVFNEHQMAKLRKSEAFTAEREKEIQHVVESVNELAQIMKDLSVLVIDQVKEDAHILHPESYFMYWYILIEHTYTFFQQGTIIDRIDYNIQNVATTVDEGLKQLQKVSPDSESLISFGFQRILKIYPHKKCRRISLFHFCVYVVVVVQAERTQKQGGMVMCASVLIIMCFVMLVLLILKTILF | 302 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 6385332 | 6390099 | + | Tan0021761.5 | Tan08g0634 | 760526 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan08g0634 | 302 | SUPERFAMILY | t-snare proteins | 3 | 168 | IPR010989 | GO:0016020(InterPro)|GO:0016192(InterPro) | |
Tan08g0634 | 302 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 197 | 226 | IPR000727 | - | |
Tan08g0634 | 302 | CDD | SNARE_syntaxin16 | 138 | 225 | - | - | |
Tan08g0634 | 302 | Gene3D | - | 1 | 218 | - | - | |
Tan08g0634 | 302 | Pfam | SNARE domain | 200 | 226 | IPR000727 | - | |
Tan08g0634 | 302 | Coils | Coil | 85 | 105 | - | - | |
Tan08g0634 | 302 | SUPERFAMILY | SNARE fusion complex | 196 | 225 | - | - | |
Tan08g0634 | 302 | PANTHER | SYNTAXIN | 15 | 272 | IPR045242 | GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan08g0632 | Tan-Chr8:6385332 | Tan08g0634 | Tan-Chr8:6385332 | 3.20E-136 | dispersed | |
Tan08g0633 | Tan-Chr8:6385332 | Tan08g0634 | Tan-Chr8:6385332 | 3.70E-129 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan08g0634 | K08489 | - | csv:101207998 | 380.563 |