Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0645 ATGGCTAATACCAGCAATACTGCAGCTGGAGTTGATAACACCTTTAGAAGAAAATTTGATCGAGAGGAGTATTTGGAACGAGCTCGTGAGCGTGAAAAACAGGAGGCTGAGAGGGTTAAGTCCAAATTGAAAGGTCCACCAGTGCAAAGAAAACCATTGAAACATAGAGATTATGAGGTAGACCTCGAGTCCCGATTGGGGAAAACCCAGGTTGTCACTCCAGTAGCGCCTCTAAGTCAGCAGGCTGGATACTACTGTTCCGTTTGTGAATGTGTGGTCAAGGATTCTGCAAATTACTTAGATCACATCAATGGAAAGAAACATCAGAGAGCCTTGGGTATGTCCATGCGGGTAGAACGGGCGTCTCTTGAACAGGTACAGGAGCGGTTTGAAGTTCTTAAAAAGAGAAAAACGCCTGGAAGCTTCACAGAGCAAGATCTTGAAGAGCGTATACTAAAGCAGCAACAAGAAGAAGAACAACGAAAGCGCGAGCGTCGGGAAAGGAAGAAAGAAAAGAAGAAAGAGAAGGCTGCCGAAGAGGAACCTGAAGTGGATCCCGACATTGCAGCAATGATGGGATTTGGGGGCTTCCGTTCATCCAAGAAGTGA 609 45.98 MANTSNTAAGVDNTFRRKFDREEYLERAREREKQEAERVKSKLKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDIAAMMGFGGFRSSKK 202
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6464026 6467181 + Tan0007337.2 Tan08g0645 760537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0645 202 Coils Coil 144 181 - -
Tan08g0645 202 Coils Coil 22 42 - -
Tan08g0645 202 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 8 202 IPR040107 GO:0000398(InterPro)|GO:0000398(PANTHER)|GO:0005681(InterPro)|GO:0046540(PANTHER)
Tan08g0645 202 SMART ZnF_U1_5 81 115 IPR003604 GO:0003676(InterPro)|GO:0008270(InterPro)
Tan08g0645 202 MobiDBLite consensus disorder prediction 137 202 - -
Tan08g0645 202 Pfam Zinc-finger of C2H2 type 84 108 IPR013087 -
Tan08g0645 202 Gene3D Classic Zinc Finger 78 116 - -
Tan08g0645 202 MobiDBLite consensus disorder prediction 137 183 - -
Tan08g0645 202 SUPERFAMILY beta-beta-alpha zinc fingers 79 125 IPR036236 -
Tan08g0645 202 FunFam zinc finger matrin-type protein 2-like 78 116 - -
Tan08g0645 202 Coils Coil 116 136 - -
Tan08g0645 202 MobiDBLite consensus disorder prediction 26 51 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0644 Tan-Chr8:6464026 Tan08g0645 Tan-Chr8:6464026 4.80E-92 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28114 PF12171 zf-C2H2_jaz 1.80E-06 CL0361 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0645 K12848 - csv:101206387 327.405