Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0664 ATGGAAGGCCCTCTGTTGCAAAAAGTGTGCGCCCTGTACGACCAAATCTCGAGCCTCACCAGCCTCAAGCCTTCCAAAAATGTCGACACTCTTTTCACCCAACTCGTTCTCACGTGCTCCCCGCCCGCCCCCGATCTCGATATCGCCTCCTTGCCCGAGCCACTTCGAGCCATGAGGGCTCATCTCATCCGCCTCTGTGCCAACGCTGAGACGCTGCTTGAACTTCATTTCTCGACCATTTTGGCCTCCTTTGATAACCCCATCCATAACTTGTCTATCTTCCCTTACTACTCTAATTACTTGAAGCTCTCGCTTCTTGAGTTTGATATTTTGAGTTCTCATTGCCGTCGCGTCCCGACTAGTGTTGCGTTCGTTGGTTCTGGCCCGCTCCCGCTCTCCTCCATTGTCATGGCGTCGACACATCTTAAGGGTACGGTTTTTCACAACTTTGACATTGATTCGAATGCAAACTCCATGGCGGGTCGGTTGGTTCGCTCTGACCCGGACTTATCGCGACGAATGATGTTTCACACAATCGATGTAATGGATGTGACTGAAGGGTTGGGGGAGTACGAGGTGGTGTTTTTAGCAGCATTGGTAGGGTTGGAGGAGGAAGATAAGGCAAAGGTTTTGAGGCATTTGGGGAAGCATATGGCGACCGGAGCTTATTTGATGCTTAGGAGTGCACATGGAGCTAGGGCATTCTTGTATCCTGTTGTTGATGTGTGTGATGTTGAAGCTTCTGGATTTGAGATTCTATCTGTGTTTCATCCCACTGATGAAGTTATAAACTCTATTGTTATTGCGAGAAAGGTATTTGATCTCGTCCCAGAAGTCGAAGGAAATTTTGCCGATGATGACGAAAACGATGACAAAGATGATGAAGATGAAAATGACGACAAACGAGGTGTTTTAGTTAACACCTCTATTGTATTGGCTGAAAAATGCTCTGGGTTTAAAGGATTTGGTCCCATGATTGAGGAGCTTGCCATGGAAGAGCAACCTTCTTGA 1011 47.58 MEGPLLQKVCALYDQISSLTSLKPSKNVDTLFTQLVLTCSPPAPDLDIASLPEPLRAMRAHLIRLCANAETLLELHFSTILASFDNPIHNLSIFPYYSNYLKLSLLEFDILSSHCRRVPTSVAFVGSGPLPLSSIVMASTHLKGTVFHNFDIDSNANSMAGRLVRSDPDLSRRMMFHTIDVMDVTEGLGEYEVVFLAALVGLEEEDKAKVLRHLGKHMATGAYLMLRSAHGARAFLYPVVDVCDVEASGFEILSVFHPTDEVINSIVIARKVFDLVPEVEGNFADDDENDDKDDEDENDDKRGVLVNTSIVLAEKCSGFKGFGPMIEELAMEEQPS 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6608724 6609990 + Tan0020561.1 Tan08g0664 760556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0664 336 Gene3D Vaccinia Virus protein VP39 6 273 IPR029063 -
Tan08g0664 336 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Tan08g0664 336 PANTHER NICOTIANAMINE SYNTHASE 3 5 280 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Tan08g0664 336 MobiDBLite consensus disorder prediction 282 297 - -
Tan08g0664 336 MobiDBLite consensus disorder prediction 282 302 - -
Tan08g0664 336 Pfam Nicotianamine synthase protein 5 272 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0664 Tan-Chr8:6608724 Tan09g0075 Tan-Chr9:3447708 6.70E-99 dispersed
Tan08g0663 Tan-Chr8:6591165 Tan08g0664 Tan-Chr8:6608724 1.40E-86 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0664 K05953 - csv:101203651 467.233