Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0693 ATGGTGGGAGATAATATTACAGCGATGTTGGGGATGATTCTTTTGCAAATTTGCTACGGTGGTTTAAACATTATCTCAAAGCTCGCCATGCAATCTGGAATGAACCCTTTTGTTCTTCTCACTTACAGACAGATTTTTGGCACTTTCGCCATTGCTCCTTTTGCCTTTTTCACTGAAAGGAAAACAAGGCCAAAGATTACTTTTCCAATTTTGTTTCAAATTCTATTGTGTTCCTTATCAGGAGCAACAGCAAACCAGATATTCTTCTTTGTTGGGTTGAAGTATACAAACCCAACAGTTTCAAGTGCTATGACCAATGTTCTTCCAGCTGCTACTTTTATTCTTGCTGTTCTTTTCAGACAAGAAAGTGTAAGAATCAAGACCAAGCCTGGTTTTGCAAAGGTAGCAGGGACAATTGTGTGTGTATGTGGGGCAATGCTGCTGTCTTTTTACCATGGACACACCATTGGCTTAGGTGAATCCAAAATTCACTGGCCATATATTGAGAGAATGATGGAAAGAAACCCGAACCGTCGAGAAAACCGCATTCTCGGCTCGATTTTGTTACTTTGCAGCTCTTTCGCTTGGGCGTTATGGTTTGTGATTCAAGCAAGATTGAGTGCCAAGTTTAAAGCTCCCTACACAAGTACTACATTGTTGTGTTTCATGGCCTTTTTCGAATGTGGATTCGTAGCTCTAATTTTAGAGCGCAACATTGCTGCTTGGTCTTTGAAAAGTACGATCCGACTCGTCGCAGTTCTTTACACGGGAGTTGTGTGTTCTGGATTGACATTTAGCATCACTTCATGGATTATACAAAGGAAAGGCCCTCTCTATGTCTCCATTTTCACCCCTTTATTGCTTATCATTGTGGCCATCCTTAGTTGGGCTCTCCTCCACGAACAACTCTACGTCGGAACAGTTATTGGCTCAGTTTTGATCATCATTGGGCTTTATGCTGTGCTATGGGGAAAGTCCAAAGAGATGAATAAGCTTCAAGATCACAACATGGAAAATCCAACAATGATAGAGAAGCCAAATGGGAATATCAGTCATAATATTGATGAGAAAAATGACATGGAATTGCAAATCACATACATCAAATGA 1107 40.56 MVGDNITAMLGMILLQICYGGLNIISKLAMQSGMNPFVLLTYRQIFGTFAIAPFAFFTERKTRPKITFPILFQILLCSLSGATANQIFFFVGLKYTNPTVSSAMTNVLPAATFILAVLFRQESVRIKTKPGFAKVAGTIVCVCGAMLLSFYHGHTIGLGESKIHWPYIERMMERNPNRRENRILGSILLLCSSFAWALWFVIQARLSAKFKAPYTSTTLLCFMAFFECGFVALILERNIAAWSLKSTIRLVAVLYTGVVCSGLTFSITSWIIQRKGPLYVSIFTPLLLIIVAILSWALLHEQLYVGTVIGSVLIIIGLYAVLWGKSKEMNKLQDHNMENPTMIEKPNGNISHNIDEKNDMELQITYIK 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6872296 6874517 - Tan0010383.1 Tan08g0693 760585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0693 368 PANTHER WAT1-RELATED PROTEIN 11 334 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan08g0693 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 152 - -
Tan08g0693 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 327 - -
Tan08g0693 368 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020(InterPro)
Tan08g0693 368 Pfam EamA-like transporter family 8 149 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0693 Tan-Chr8:6872296 Tan08g1287 Tan-Chr8:43761805 7.20E-62 dispersed
Tan01g2043 Tan-Chr1:23378427 Tan08g0693 Tan-Chr8:6872296 3.20E-32 transposed
Tan05g2693 Tan-Chr5:78649766 Tan08g0693 Tan-Chr8:6872296 2.00E-54 transposed
Tan07g1808 Tan-Chr7:69640810 Tan08g0693 Tan-Chr8:6872296 1.10E-31 transposed
Tan08g0693 Tan-Chr8:6872296 Tan09g0053 Tan-Chr9:2617891 1.90E-115 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0693 - - - 0.0