Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan08g0700 | ATGCTTGGCTGTGGCAAAGGGATTTCAGAAGTTGGCCCTGTAATCAACTACAATCACTCTTGCAGGAATCTAGAGAAACAAGCTATGGCCAATGATCTAAACCAAGAGCTGTCAAAGAAAACAAGCATATTTGGTCTAAAAGTATGGGAAGTGATTGGAATTGGAGTAGGCTTATTCATAATCTCAATCCTCTGCATCCTCTCACTCTGTTTAACCTCATTCAACAAGAAGTCAAAAAAATCATCAGCCACAAACTCCAACTCCTTATTCCCTCTCACTCAAATCCCATCTCATTCAAAAGACATAAAGGCAATTCACATAACTACCACTAACAAAAAACCAACAACAATTCAAAAAATGGACAACAGCAACAACTACAGCAGTGAATCAGGATCATTATTTCATCAATTGAGCTATGGCTTTGGATCACAATCAGGGGATGAAGGCAGCAGCTCGGGCACCGTCACGACAACAATGTACCGACGTTCAACGTCACCAACGACGACAACGGTTCCTTCGCCGCTGTCGGGGCTGCCGGAGATGTCACAATTGGGGTGGGGGTATTGGTTTACTTTGAGGGAGTTGGATCTGGCCACCAATTTGTTCTCAGAGGAGAATTTGATTGGAGAAGGAGGGTATGGAGTTGTGTATAGAGGGTGCTTGTTGAATGGGACACCAGTGGCAGTTAAGAAGATTTTTAATGGAGAGGGTCAAGCAGAGAAGGAATTCAAAGCGGAAGTTGAGGCAATTGGGCATGCAAGACATAAGAATCTTGTTCGTCTTTTGGGATACTGCATTGAAGGGACTCATAGGATGTTGGTGTATGAGTATATAAACAATGGAAGCTTAGAGCTGTGGCTACATGGAGGAATGGGACAGAATACATATCTTACATGGGAGGCTCGAATGAAGATCATGGTCGGGACAGCCAAAGGACTCGCATACTTACACGAAGCCATTGAGCCAAAGGTCATACATCGAGACGTTAAGGCGAGCAACATACTTATAGATGAAAATTTCAATGCCAAAGTCTCAGACTTTGGGCTAGCAAAATTGATGGATGTTGGGAAGACTCATGTTACAACACGAGTTATGGGGACATTTGGATATGTGGCTCCTGAATATGCAAACACGGGACTTTTGAATGAGAAGAGCGATGTGTATAGCTTTGGAGTTGTTCTGGTGGAAACAATCACTGGAAGAGATCCAGTGGACTATGGACGTCCGCCTAAGCAGGTGAATGTGGTGGATTGGCTAAAAATGATGATTGGAAGTAGGCGATGTGAAGAAGTGGTGGACACAAAAATAGGGGTTGGAGGAAGGCCATCCACAAGAGGGTTGAAAAGAGTTCTATTGGTTGCTTTGAGATGTGTGGATCCTGATTATGAGAAGAGACCAAAAATGAGCCAAGTTGTTCGAATGCTTGAATCTCAAGATAATCCTTCTCATATTTCACGTTCTACTTAG | 1467 | 43.29 | MLGCGKGISEVGPVINYNHSCRNLEKQAMANDLNQELSKKTSIFGLKVWEVIGIGVGLFIISILCILSLCLTSFNKKSKKSSATNSNSLFPLTQIPSHSKDIKAIHITTTNKKPTTIQKMDNSNNYSSESGSLFHQLSYGFGSQSGDEGSSSGTVTTTMYRRSTSPTTTTVPSPLSGLPEMSQLGWGYWFTLRELDLATNLFSEENLIGEGGYGVVYRGCLLNGTPVAVKKIFNGEGQAEKEFKAEVEAIGHARHKNLVRLLGYCIEGTHRMLVYEYINNGSLELWLHGGMGQNTYLTWEARMKIMVGTAKGLAYLHEAIEPKVIHRDVKASNILIDENFNAKVSDFGLAKLMDVGKTHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLVETITGRDPVDYGRPPKQVNVVDWLKMMIGSRRCEEVVDTKIGVGGRPSTRGLKRVLLVALRCVDPDYEKRPKMSQVVRMLESQDNPSHISRST | 488 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 6920820 | 6925422 | - | Tan0022549.1 | Tan08g0700 | 760592 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan08g0700 | 488 | Gene3D | Transferase(Phosphotransferase) domain 1 | 278 | 486 | - | - | |
Tan08g0700 | 488 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 182 | 277 | - | - | |
Tan08g0700 | 488 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 324 | 336 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan08g0700 | 488 | Pfam | Protein kinase domain | 203 | 472 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan08g0700 | 488 | SMART | serkin_6 | 202 | 475 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan08g0700 | 488 | ProSitePatterns | Protein kinases ATP-binding region signature. | 208 | 231 | IPR017441 | GO:0005524(InterPro) | |
Tan08g0700 | 488 | Gene3D | Phosphorylase Kinase; domain 1 | 181 | 277 | - | - | |
Tan08g0700 | 488 | PANTHER | OS01G0323000 PROTEIN | 29 | 482 | IPR052232 | - | |
Tan08g0700 | 488 | SUPERFAMILY | Protein kinase-like (PK-like) | 176 | 478 | IPR011009 | - | |
Tan08g0700 | 488 | ProSiteProfiles | Protein kinase domain profile. | 202 | 483 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan08g0700 | 488 | FunFam | Putative receptor-like serine/threonine-protein kinase | 278 | 488 | - | - | |
Tan08g0700 | 488 | CDD | STKc_IRAK | 208 | 476 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan06g2813 | Tan-Chr6:80230106 | Tan08g0700 | Tan-Chr8:6920820 | 3.20E-139 | dispersed | |
Tan08g0700 | Tan-Chr8:6920820 | Tan10g0239 | Tan-Chr10:2138535 | 7.60E-128 | dispersed | |
Tan08g0700 | Tan-Chr8:6920820 | Tan05g0624 | Tan-Chr5:4631506 | 6.20E-154 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67935 | PF00069 | Pkinase | 3.50E-47 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan08g0700 | - | - | - | 0.0 |