Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0700 ATGCTTGGCTGTGGCAAAGGGATTTCAGAAGTTGGCCCTGTAATCAACTACAATCACTCTTGCAGGAATCTAGAGAAACAAGCTATGGCCAATGATCTAAACCAAGAGCTGTCAAAGAAAACAAGCATATTTGGTCTAAAAGTATGGGAAGTGATTGGAATTGGAGTAGGCTTATTCATAATCTCAATCCTCTGCATCCTCTCACTCTGTTTAACCTCATTCAACAAGAAGTCAAAAAAATCATCAGCCACAAACTCCAACTCCTTATTCCCTCTCACTCAAATCCCATCTCATTCAAAAGACATAAAGGCAATTCACATAACTACCACTAACAAAAAACCAACAACAATTCAAAAAATGGACAACAGCAACAACTACAGCAGTGAATCAGGATCATTATTTCATCAATTGAGCTATGGCTTTGGATCACAATCAGGGGATGAAGGCAGCAGCTCGGGCACCGTCACGACAACAATGTACCGACGTTCAACGTCACCAACGACGACAACGGTTCCTTCGCCGCTGTCGGGGCTGCCGGAGATGTCACAATTGGGGTGGGGGTATTGGTTTACTTTGAGGGAGTTGGATCTGGCCACCAATTTGTTCTCAGAGGAGAATTTGATTGGAGAAGGAGGGTATGGAGTTGTGTATAGAGGGTGCTTGTTGAATGGGACACCAGTGGCAGTTAAGAAGATTTTTAATGGAGAGGGTCAAGCAGAGAAGGAATTCAAAGCGGAAGTTGAGGCAATTGGGCATGCAAGACATAAGAATCTTGTTCGTCTTTTGGGATACTGCATTGAAGGGACTCATAGGATGTTGGTGTATGAGTATATAAACAATGGAAGCTTAGAGCTGTGGCTACATGGAGGAATGGGACAGAATACATATCTTACATGGGAGGCTCGAATGAAGATCATGGTCGGGACAGCCAAAGGACTCGCATACTTACACGAAGCCATTGAGCCAAAGGTCATACATCGAGACGTTAAGGCGAGCAACATACTTATAGATGAAAATTTCAATGCCAAAGTCTCAGACTTTGGGCTAGCAAAATTGATGGATGTTGGGAAGACTCATGTTACAACACGAGTTATGGGGACATTTGGATATGTGGCTCCTGAATATGCAAACACGGGACTTTTGAATGAGAAGAGCGATGTGTATAGCTTTGGAGTTGTTCTGGTGGAAACAATCACTGGAAGAGATCCAGTGGACTATGGACGTCCGCCTAAGCAGGTGAATGTGGTGGATTGGCTAAAAATGATGATTGGAAGTAGGCGATGTGAAGAAGTGGTGGACACAAAAATAGGGGTTGGAGGAAGGCCATCCACAAGAGGGTTGAAAAGAGTTCTATTGGTTGCTTTGAGATGTGTGGATCCTGATTATGAGAAGAGACCAAAAATGAGCCAAGTTGTTCGAATGCTTGAATCTCAAGATAATCCTTCTCATATTTCACGTTCTACTTAG 1467 43.29 MLGCGKGISEVGPVINYNHSCRNLEKQAMANDLNQELSKKTSIFGLKVWEVIGIGVGLFIISILCILSLCLTSFNKKSKKSSATNSNSLFPLTQIPSHSKDIKAIHITTTNKKPTTIQKMDNSNNYSSESGSLFHQLSYGFGSQSGDEGSSSGTVTTTMYRRSTSPTTTTVPSPLSGLPEMSQLGWGYWFTLRELDLATNLFSEENLIGEGGYGVVYRGCLLNGTPVAVKKIFNGEGQAEKEFKAEVEAIGHARHKNLVRLLGYCIEGTHRMLVYEYINNGSLELWLHGGMGQNTYLTWEARMKIMVGTAKGLAYLHEAIEPKVIHRDVKASNILIDENFNAKVSDFGLAKLMDVGKTHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLVETITGRDPVDYGRPPKQVNVVDWLKMMIGSRRCEEVVDTKIGVGGRPSTRGLKRVLLVALRCVDPDYEKRPKMSQVVRMLESQDNPSHISRST 488
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6920820 6925422 - Tan0022549.1 Tan08g0700 760592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0700 488 Gene3D Transferase(Phosphotransferase) domain 1 278 486 - -
Tan08g0700 488 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 182 277 - -
Tan08g0700 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 324 336 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0700 488 Pfam Protein kinase domain 203 472 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0700 488 SMART serkin_6 202 475 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0700 488 ProSitePatterns Protein kinases ATP-binding region signature. 208 231 IPR017441 GO:0005524(InterPro)
Tan08g0700 488 Gene3D Phosphorylase Kinase; domain 1 181 277 - -
Tan08g0700 488 PANTHER OS01G0323000 PROTEIN 29 482 IPR052232 -
Tan08g0700 488 SUPERFAMILY Protein kinase-like (PK-like) 176 478 IPR011009 -
Tan08g0700 488 ProSiteProfiles Protein kinase domain profile. 202 483 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0700 488 FunFam Putative receptor-like serine/threonine-protein kinase 278 488 - -
Tan08g0700 488 CDD STKc_IRAK 208 476 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2813 Tan-Chr6:80230106 Tan08g0700 Tan-Chr8:6920820 3.20E-139 dispersed
Tan08g0700 Tan-Chr8:6920820 Tan10g0239 Tan-Chr10:2138535 7.60E-128 dispersed
Tan08g0700 Tan-Chr8:6920820 Tan05g0624 Tan-Chr5:4631506 6.20E-154 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67935 PF00069 Pkinase 3.50E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0700 - - - 0.0