Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0777 ATGGGTTTGGTTGAAGAATACTTGCCAGCAATGGCGGCGTTTGGGCTTCAAATGACCTACGCCATTATGGCTCTCATCTCCCGAGCTGCCCTCTTGAAGGGCATGAGTCCTAGAGTTTTCGTTGTTTATAGGCAGGCCATTGCCACTCTTTTTATTGCACCCATTGCTTATTTTTCAAGGTCGAAATCAAGGAGGTTGTCTTTGAACATGAAGAGCTTTTCTCTAATCTTCCTTGTTGCTCTTGTCGGTGTAACGATATACCAAAATATTTACGTCGAAGGAATTTTCTTAGCCACGTCGTCTACGGCGACGACAATGGGGAATTTGACTCCAGCGATGACGTTTGTGATAGCATCAATTGTCGGAATGGAGAGGGTGAGGATGAGAAGCTTGAGGAGCATGGCAAAGATAGGAGGGACAGTGGTTTGTGTTAGTGGAGCTATGTGCATGGCCCTTCTGAGGGGTCCAAAGCTTCTGAATAATGCAACAAAAGGTTTAGGACTGAAATCTTCAATATTTGATTTGGAAAGTGCTTGGTTATTGGGTTGCTTGTGTCTCTTTGGGAGCTGTTGTTGTTGGTCAAGTTGGATGGTTTTGCAGGTGCCAACTTCAGCAAGCTATCCAGACAACTTATCTTTATCAGCATGGATGTGTTTCTTTGCCACGATTCAATCGTTCATTGTTACATTGTTGGTAGAACCAATCAATCTAGAAACATGGAAAATACATTCAAGTATTGAAGTTATTTGTTATCTTTTCACGGGAATTGTTGGCTCAGGAATTGCCTTCTTTGTTCAAGCTTGGTGTATTTCAAAAAGGGGCCCTGTCTTTGCAGCAATGTTCAACCCTCTTTGCACCATTATTACAACTATCTTGGCAGCTATATTTCTTCATGAGGAGATTTATACCGGAAGCTTGTTGGGGGGTGTGGCTGTAATTATTGGATTGTATATTGTTCTTTGGGGAAAAGCACATGATTATGTGAAGGAAGAAAGGACAGAAAAGCATAGTGTTGAAAACCAAGAAGAGGATTGTGAATCAGCTTCAGTTGAGACCAACAACTATAAAATTGATTTGGAGGAACCCCTTTTGTCTAAAGGATGTATACATCATATTGACAACTAG 1125 41.6 MGLVEEYLPAMAAFGLQMTYAIMALISRAALLKGMSPRVFVVYRQAIATLFIAPIAYFSRSKSRRLSLNMKSFSLIFLVALVGVTIYQNIYVEGIFLATSSTATTMGNLTPAMTFVIASIVGMERVRMRSLRSMAKIGGTVVCVSGAMCMALLRGPKLLNNATKGLGLKSSIFDLESAWLLGCLCLFGSCCCWSSWMVLQVPTSASYPDNLSLSAWMCFFATIQSFIVTLLVEPINLETWKIHSSIEVICYLFTGIVGSGIAFFVQAWCISKRGPVFAAMFNPLCTIITTILAAIFLHEEIYTGSLLGGVAVIIGLYIVLWGKAHDYVKEERTEKHSVENQEEDCESASVETNNYKIDLEEPLLSKGCIHHIDN 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8101560 8106815 + Tan0009306.1 Tan08g0777 760669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0777 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 144 - -
Tan08g0777 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 217 324 - -
Tan08g0777 374 PANTHER WAT1-RELATED PROTEIN 14 339 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan08g0777 374 Pfam EamA-like transporter family 181 320 IPR000620 GO:0016020(InterPro)
Tan08g0777 374 Pfam EamA-like transporter family 12 132 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0777 Tan-Chr8:8101560 Tan08g0779 Tan-Chr8:8218633 1.30E-148 dispersed
Tan08g0777 Tan-Chr8:8101560 Tan08g0778 Tan-Chr8:8136950 1.10E-169 tandem
Tan08g0777 Tan-Chr8:8101560 Tan09g1620 Tan-Chr9:67882569 5.50E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0777 - - - 0.0