Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0778 ATGGGTTTGGTTGAAGAATACTTGCCAGCAATGGCGATGTTTGGGCTTCAAATGACCTACGCCATTATGGCTCTCATCTCCCGAGCTGCCCTCTTGAAGGGCATGAGTCCTAGAGTTTTCGTTGTTTATAGGCAGGCCATTGCCACTCTTTTTATTGCACCCATTGCTTATTTTTCAAGGTCGAAATCCAGGAGGTTGTCTTTGGACATGAAGAGCTTTTCTCTAATCTTCCTTGCTGCTCTTGTCGGTGCAACAATGAACCAAAATGTTTACTTTGAGGGAGTTTTCTTAGCCACCTCATCAATGGCGACGGCAATGACGAATTTGATTCCGGCGGTGACGTTTGTGATAGCAGCAATTGTCGGAATGGAGAGTGTGGAGATGAGAAGCTTGAGGGGCATGGCAAAGATAGGAGGGACAGTGGTTTGTGTGAGTGGGGCTATGTGTATGGCCCTTCTGAGGGGTCCAAAGCTTCTGAATAATGCCACAAAAGGTTTTGGAGTGAAATCTTCAATATTTGGTTTGGAAAGTGGAAGTGATCATGCTTGGTTATTGGGTTCCTTGAGTCTCTTTGGGAGCTGTTGTTGCTGGTCAATTTGGTTGATTTTGCAGGTACCAGCTTCAGCAAGCTATCCCGACAATTTATCTTTATCAGCATGGATGTGTTTCTTTGCCACGATTCAATCGTTCATTGTTACTCTGTTGGTAGAACCATTCAATATAGAAACATGGAAAATACATTCAAGTATTGAAGTTATTTGTTATCTTTTCTCGGGAATTGTTGGCTCAGGCATTGCCTTCTTTGTTCAAGCTTGGTGTGTTTCAAAAAGGGGCCCTGTCTTCTCAGCAATGTTCAACCCTCTTTGCACCATTATTACAACTATTTTGGCAGCTATATTTCTTCATGAGGAGATTTATATTGGAAGCTTGTTTGGAGGTGTGGCTATAATTATTGGATTGTACATTGTTCTTTGGGGAAAAGCACATGATTATGTGGAGGAAGAAGAGACAGAAAACCAAGAAGAGATCAATTGCGAATCAACTTCCCAAAAAATTAATTTGGAGGAACCCCTATTGTCTAAAGGAGTTATACATCATACTGAAAACTAG 1110 41.89 MGLVEEYLPAMAMFGLQMTYAIMALISRAALLKGMSPRVFVVYRQAIATLFIAPIAYFSRSKSRRLSLDMKSFSLIFLAALVGATMNQNVYFEGVFLATSSMATAMTNLIPAVTFVIAAIVGMESVEMRSLRGMAKIGGTVVCVSGAMCMALLRGPKLLNNATKGFGVKSSIFGLESGSDHAWLLGSLSLFGSCCCWSIWLILQVPASASYPDNLSLSAWMCFFATIQSFIVTLLVEPFNIETWKIHSSIEVICYLFSGIVGSGIAFFVQAWCVSKRGPVFSAMFNPLCTIITTILAAIFLHEEIYIGSLFGGVAIIIGLYIVLWGKAHDYVEEEETENQEEINCESTSQKINLEEPLLSKGVIHHTEN 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8136950 8141454 + Tan0020072.1 Tan08g0778 760670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0778 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 222 328 - -
Tan08g0778 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 144 - -
Tan08g0778 369 PANTHER WAT1-RELATED PROTEIN 11 339 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan08g0778 369 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020(InterPro)
Tan08g0778 369 Pfam EamA-like transporter family 12 143 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2023 Tan-Chr2:89481846 Tan08g0778 Tan-Chr8:8136950 1.50E-62 dispersed
Tan07g0144 Tan-Chr7:3874361 Tan08g0778 Tan-Chr8:8136950 4.10E-54 dispersed
Tan08g0778 Tan-Chr8:8136950 Tan08g0780 Tan-Chr8:8291666 1.30E-148 dispersed
Tan08g0777 Tan-Chr8:8101560 Tan08g0778 Tan-Chr8:8136950 1.10E-169 tandem
Tan08g0778 Tan-Chr8:8136950 Tan08g0779 Tan-Chr8:8218633 3.60E-146 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0778 - - - 0.0