Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0779 ATGGGTTTGGTTGAAGAATACTTACCAGCAATGGCAATGTTAGGAATTCAAATAATTTACGCCATTGTGACTCTCATCTCCCGAGCTGCCCTCTTGGAGGGCATGAGTCCTAGAGTTTTTATTGTTTATAGACAAGCCATTGCCACTCTCTTTATTGGACCCATTGCTTATTTTTCAAGGTCTAAATCCATGAAGTTATCTTTGGATTTGAGGAGCTTTTATTTGATTTTCGTTGCTGGTCTTATTGGTACAACGATCAACCTCAATTTTTTCTATGAGGGAGTTTTCTTAGCCAACTCGTCATTAGCCACCGCCATGGAAAATCTGATTCCAGCAGTGACCTTTTTTATAGCGGCAATTGTCGGAATGGAGAGCGTGAAGATGGGTGACCTAAGGAGCATGGCAAAGATAGGAGGGACAGCGCTTTGTGTGAGTGGGGCCATGTGCATGGCCCTTCTAAGGGGTCCAAAGCTTCTGAATAATGCCACACAAAAGTCTGCAATATTTGATGTGGAAAGTGAAAGTGATGAAGCTTGGTTATTGGGTTGCTTGTCTCTCTTTGGTAGCTGTTGTTGCTGGTCAATTTGGTTAATCTTGCAGGTACCGGCAATAGAAAGCTATCCCGACAAGCTATCTTTATCAGCATGGACGTGTTTCTTTTCACTGATACAATCAATCATTTTTACTCTATCGGTAGAGCAAACCAATTTAGAAATATGGAAAATACATTCAAGTACTGAAGTTATTTGTTACCTTTTCTCAGGAATTTTTGGGTCAGGTGTTGCCTATTTTCTTCAAGCTTGGGGTATTTCAAAAAGGGGCCCTGTCTTCTCTGCAGTCTTCAACCCTTTTTGCACCATTATTACAACTATTTTAGCAGCTATATTTCTTCATGAAGAGATTTATACTGGAAGCTTGTTGGGGGGCGTGGTTGTAATTATTGGATTGTACGTTGTTCTTTGGGGAAAAGCAAATGATTATGTGAAGGAAAAAGGCACAGAGAAGAGTAGTGTTGAAAAACAAGAAGAAGATTGTGAATCAGCTTCATTCGTGACAGATAGCTATAATATTGATTTAGAGGAACCCCTTTTGTCTATTGACAACTAG 1107 40.11 MGLVEEYLPAMAMLGIQIIYAIVTLISRAALLEGMSPRVFIVYRQAIATLFIGPIAYFSRSKSMKLSLDLRSFYLIFVAGLIGTTINLNFFYEGVFLANSSLATAMENLIPAVTFFIAAIVGMESVKMGDLRSMAKIGGTALCVSGAMCMALLRGPKLLNNATQKSAIFDVESESDEAWLLGCLSLFGSCCCWSIWLILQVPAIESYPDKLSLSAWTCFFSLIQSIIFTLSVEQTNLEIWKIHSSTEVICYLFSGIFGSGVAYFLQAWGISKRGPVFSAVFNPFCTIITTILAAIFLHEEIYTGSLLGGVVVIIGLYVVLWGKANDYVKEKGTEKSSVEKQEEDCESASFVTDSYNIDLEEPLLSIDN 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8218633 8225318 + Tan0005848.1 Tan08g0779 760671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0779 368 PANTHER WAT1-RELATED PROTEIN 11 337 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan08g0779 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 216 323 - -
Tan08g0779 368 Pfam EamA-like transporter family 181 320 IPR000620 GO:0016020(InterPro)
Tan08g0779 368 Pfam EamA-like transporter family 11 128 IPR000620 GO:0016020(InterPro)
Tan08g0779 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0777 Tan-Chr8:8101560 Tan08g0779 Tan-Chr8:8218633 1.30E-148 dispersed
Tan08g0779 Tan-Chr8:8218633 Tan08g0781 Tan-Chr8:8374877 8.00E-154 dispersed
Tan08g0778 Tan-Chr8:8136950 Tan08g0779 Tan-Chr8:8218633 3.60E-146 tandem
Tan08g0779 Tan-Chr8:8218633 Tan08g0780 Tan-Chr8:8291666 1.20E-178 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0779 - - - 0.0