Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0791 ATGGATCCCCAAACTCTCAACGGCCACGATTTCATCTTCCGATCAAAACTCCCCGACATATACATCCCAAACCACCTCCCTCTCCACACCTATTGCTTCGAAAACCTCTCCCAATTCAGCCACCGCCCCTGCCTCATCAACGGCGCCACCGGCGAGGTCCACACCTACGCCGCCGTCGACCTGGCGGCGCGTCGTGTCGCCGCTGGGCTGAGCAAGATCGGCATCGGACAAGGCGATGTGATCATGCTTCTGCTGCAGAACAGCCCGGAGTTCGTGTTCGCCTTCCTTGGCGCGTCGTACGGCGGCGCCATTGCGACCACGGCGAACCCGTTGTACAAGCCGGCGGAGATAGCGAAGCAGGCGGCGACGGCGAGGCCGAAGGTGATTGTTACGCAGGCGGAGTTTGTGGAGAAGGTTTGGGGATTTGCGGTGGAACATGGGGTGAAGATTTTGTGTACGGATTCGCCGCCGGTGGGTTGCTTGAGATTCTCGGAGCTTTTGGAGGCCGATGAAAATGAGATTCCGGCGGTGAAGATTAACTCGAATGATGTTGTGGCGCTTCCGTTCTCGTCGGGAACTACTGGAGTTGCTAAAGGCGTTATGCTTACGCATAAATCTCTTGTCACTAGCGTCGCTCAACAGGTGGATGGAGAGAATCCAAACCTAAATTTCAACAGCAACGACGTGATAATATGCGTTCTTCCACTATTCCACATCTACTCTCTAAACTCCGTTCTCCTCTGCGGACTACGTGTCGGCGCTGCCATCCTCATCCTCAAAAAATACGACATGTCGTCTCTTCTTCACCTCATTCAAACCCACAACGCCACAATAGCTCCCTTCGTCCCTCCCATCGTCTTGGACTTTGCCAAAAATCCCGACATCCACCGTTACGACTTGTCGTCCATTCGATTCGTCATGTCGGGCGCCGCCCCCATGGGCAAGGACCTTGAGGACACCCTTAAAGCCAGGCTCCCCAACGCCAAGCTCGGACAGGGTTATGGAATGACGGAGGCAGGGCCGGTGCTATCGATGAGTTTGGCGTTTGCAAAGGAACCTTTCGAGGTGAAATCAGGTGCGTGCGGGACCATCGTAAGAAATGCTGAGATGAAGATCATCCACCCTGAAACCGGTGTTTCCTTGCCACGTAATCAGCCTGGCGAGATCTGCATACGTGGCTTCCAGATCATGAAAGGTTATCTTAACAACAAAAAAGCAACCGAGCAGACCATAGACAAAGATGGGTGGCTCCACACAGGAGACTTAGGGTTCATCGATGACGACGACGAGATCTTCATCGTCGATCGACTGAAGGAACTGATCAAATACAAAGGATACCAAGTGGCCCCAGCAGAGCTTGAAGCTCTCTTGACTTCAAACCCTAACATTTCTGCTGCTGCTGTCATACCTATGGAGAATGAAGCAGCAGGACAGATCCCTGTTGCATTTGTTGTTAGATGTAAAGGTTCCAAGATTAGTGAGGATGACATCAAAAAGTACATTTCAGATCAGGTGATATATTACAAAAAAATCAGAAAGGTTATCTTTGTGGACTCAATTCCAATGGCTCCTTCAGGCAAGATATTGAGGAAAGATTTGAAAGCTCAGTTGGAGGCTGGTGCCTTTTAA 1629 51.5 MDPQTLNGHDFIFRSKLPDIYIPNHLPLHTYCFENLSQFSHRPCLINGATGEVHTYAAVDLAARRVAAGLSKIGIGQGDVIMLLLQNSPEFVFAFLGASYGGAIATTANPLYKPAEIAKQAATARPKVIVTQAEFVEKVWGFAVEHGVKILCTDSPPVGCLRFSELLEADENEIPAVKINSNDVVALPFSSGTTGVAKGVMLTHKSLVTSVAQQVDGENPNLNFNSNDVIICVLPLFHIYSLNSVLLCGLRVGAAILILKKYDMSSLLHLIQTHNATIAPFVPPIVLDFAKNPDIHRYDLSSIRFVMSGAAPMGKDLEDTLKARLPNAKLGQGYGMTEAGPVLSMSLAFAKEPFEVKSGACGTIVRNAEMKIIHPETGVSLPRNQPGEICIRGFQIMKGYLNNKKATEQTIDKDGWLHTGDLGFIDDDDEIFIVDRLKELIKYKGYQVAPAELEALLTSNPNISAAAVIPMENEAAGQIPVAFVVRCKGSKISEDDIKKYISDQVIYYKKIRKVIFVDSIPMAPSGKILRKDLKAQLEAGAF 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8784211 8793164 + Tan0001653.1 Tan08g0791 760683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0791 542 Pfam AMP-binding enzyme C-terminal domain 452 527 IPR025110 -
Tan08g0791 542 SUPERFAMILY Acetyl-CoA synthetase-like 11 539 - -
Tan08g0791 542 Gene3D - 4 437 IPR042099 -
Tan08g0791 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 534 - GO:0016405(PANTHER)
Tan08g0791 542 Pfam AMP-binding enzyme 34 401 IPR000873 -
Tan08g0791 542 ProSitePatterns Putative AMP-binding domain signature. 187 198 IPR020845 -
Tan08g0791 542 Gene3D - 438 540 IPR045851 -
Tan08g0791 542 CDD 4CL 22 533 - -
Tan08g0791 542 FunFam 4-coumarate--CoA ligase 2 439 540 - -
Tan08g0791 542 FunFam Long-chain-fatty-acid--CoA ligase FadD 14 438 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0498 Tan-Chr6:3810324 Tan08g0791 Tan-Chr8:8784211 3.80E-205 dispersed
Tan06g0499 Tan-Chr6:3824167 Tan08g0791 Tan-Chr8:8784211 2.70E-206 dispersed
Tan07g0694 Tan-Chr7:10891128 Tan08g0791 Tan-Chr8:8784211 5.50E-19 dispersed
Tan08g0791 Tan-Chr8:8784211 Tan09g1675 Tan-Chr9:68378870 1.00E-205 dispersed
Tan08g0791 Tan-Chr8:8784211 Tan08g0792 Tan-Chr8:8784211 1.80E-231 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0791 K01904 - csv:101210868 922.154