Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0792 ATGGATCCCCAAACTCTCAACGGCCACGATTTCATCTTCCGATCAAAACTCCCCGACATATACATCCCAAACCACCTCCCTCTCCACACCTATTGCTTCGAAAACCTCTCCCAATTCAGCCACCGCCCCTGCCTCATCAACGGCGCCACCGGCGAGGTCCACACCTACGCCGCCGTCGACCTGGCGGCGCGTCGTGTCGCCGCTGGGCTGAGCAAGATCGGCATCGGACAAGGCGATGTGATCATGCTTCTGCTGCAGAACAGCCCGGAGTTCGTGTTCGCCTTCCTTGGCGCGTCGTACGGCGGCGCCATTGCGACCACGGCGAACCCGTTGTACAAGCCGGCGGAGATAGCGAAGCAGGCGGCGACGGCGAGGCCGAAGGTGATTGTTACGCAGGCGGAGTTTGTGGAGAAGGTTTGGGGATTTGCGGTGGAACATGGGGTGAAGATTTTGTGTACGGATTCGCCGCCGGTGGGTTGCTTGAGATTCTCGGAGCTTTTGGAGGCCGATGAAAATGAGATTCCGGCGGTGAAGATTAACTCGAATGATGTTGTGGCGCTTCCGTTCTCGTCGGGAACTACTGGAGTTGCTAAAGGCGTTATGCTTACGCATAAATCTCTTGTCACTAGCGTCGCTCAACAGGTGGATGGAGAGAATCCAAACCTAAATTTCAACAGCAACGACGTGATAATATGCGTTCTTCCACTATTCCACATCTACTCTCTAAACTCCGTTCTCCTCTGCGGACTACGTGTCGGCGCTGCCATCCTCATCCTCAAAAAATACGACATGTCGTCTCTTCTTCACCTCATTCAAACCCACAACGCCACAATAGCTCCCTTCGTCCCTCCCATCGTCTTGGACTTTGCCAAAAATCCCGACATCCACCGTTACGACTTGTCGTCCATTCGATTCGTCATGTCGGGCGCCGCCCCCATGGGCAAGGACCTTGAGGACACCCTTAAAGCCAGGCTCCCCAACGCCAAGCTCGGACAGGGTTATGGAATGACGGAGGCAGGGCCGGTGCTATCGATGAGTTTGGCGTTTGCAAAGGAACCTTTCGAGGTGAAATCAGGTGCGTGCGGGACCATCGTAAGAAATGCTGAGATGAAGATCATCCACCCTGAAACCGGTGTTTCCTTGCCACGTAATCAGCCTGGCGAGATCTGCATACGTGGCTTCCAGATCATGAAAGGCAAGTCCCACATCACACCTACTCTTTTCTCATTTGACCAATCATACCTCTTATTTTTGCACACGTGGCACACTCTCTTTCTCGTCGTATACTCCTTACTTCATTACATGTCAGCATCACGCATCATTTAA 1326 53.47 MDPQTLNGHDFIFRSKLPDIYIPNHLPLHTYCFENLSQFSHRPCLINGATGEVHTYAAVDLAARRVAAGLSKIGIGQGDVIMLLLQNSPEFVFAFLGASYGGAIATTANPLYKPAEIAKQAATARPKVIVTQAEFVEKVWGFAVEHGVKILCTDSPPVGCLRFSELLEADENEIPAVKINSNDVVALPFSSGTTGVAKGVMLTHKSLVTSVAQQVDGENPNLNFNSNDVIICVLPLFHIYSLNSVLLCGLRVGAAILILKKYDMSSLLHLIQTHNATIAPFVPPIVLDFAKNPDIHRYDLSSIRFVMSGAAPMGKDLEDTLKARLPNAKLGQGYGMTEAGPVLSMSLAFAKEPFEVKSGACGTIVRNAEMKIIHPETGVSLPRNQPGEICIRGFQIMKGKSHITPTLFSFDQSYLLFLHTWHTLFLVVYSLLHYMSASRII 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8784211 8789079 + Tan0001653.2 Tan08g0792 760684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0792 441 ProSitePatterns Putative AMP-binding domain signature. 187 198 IPR020845 -
Tan08g0792 441 Gene3D - 4 401 IPR042099 -
Tan08g0792 441 Pfam AMP-binding enzyme 34 399 IPR000873 -
Tan08g0792 441 SUPERFAMILY Acetyl-CoA synthetase-like 11 399 - -
Tan08g0792 441 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 399 - GO:0016405(PANTHER)
Tan08g0792 441 FunFam Long-chain-fatty-acid--CoA ligase FadD 14 401 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0792 Tan-Chr8:8784211 Tan08g1857 Tan-Chr8:70812704 5.20E-59 dispersed
Tan08g0791 Tan-Chr8:8784211 Tan08g0792 Tan-Chr8:8784211 1.80E-231 tandem
Tan07g0694 Tan-Chr7:10891128 Tan08g0792 Tan-Chr8:8784211 5.60E-11 transposed
Tan08g0792 Tan-Chr8:8784211 Tan09g1675 Tan-Chr9:68378870 1.70E-147 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0792 K01904 - csv:101210868 682.559