Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0796 ATGGCTTTTCTAGAGGTAAAACAGAAACTCCTACACGAGATTGAAGCTTTAGGATTCTCAAGGGCACAAGCAGCCCGAGCACTTCATAGTACCGGAAATGTCAGCTCTGAAGATGCAATAAATTGGATCGTTGATCATGAGAATGATCCAGATATAGATCAAATGCCCCCGGTAGCAGTAGAGATTGATATTGAATCTCCTGAACCATTCCATATCACAGAGGAAATGAAAATGAAAGCTAATGAACTAAGGGATCAAATTCTGAAACAAAAGGAAAAAGAAGAAAAAGAGTTAGAAAGACAAAGGGAGAAGGATAGAATTCGTTCTGGTAAAGAACTGCAAGAAGCAAAAAGAATGGCCGAAGAAACTGAAAGGAAACGTTATATAGATTCTAGGCAAGTTGAGAAACAGGAGGAGAAAAAAGCAAGAGAAAAAGTTCTACAAAAACTTGAACAAGATAAGATGGAAAGAAAGAAGAATCTTGTAATGCCCTCTCAAAGGTCTGGAAGCCTTGCTACAAAAGCTATCACAATAGAAGCAGGGGAAAAGGACGGACTTAGAGCACTGAATTCAGCAACTTCAGTTAGTAAAACAGTCTCCATGAGAGAATGCTTAAGGTCTCTTAGGCACCATCAAAAGGATGAATCTGACAAAGTGAGAAATGCCTTCCAAACCCTCTCCACCTATGTTAGAAATGTAGCAAGAAATCCTGATGAGGAAAGGTTTAGGAAGATTCCACTCAGTAATCCTTTGTTCCAGGAAAGAGTTGGGAGTTCGAAAGGAGGGATTGAGTTTCTTGAGCTTTGTGGCTTTCGGAGAGAAGGAGACTTTCTATACCTTCCACGTGATAAAGTCGACCGGGAACTTTTAGTCACTGCTGGATCACTTCTGGAATCTGCATTGACAAATCCCTTTTTTGGTATTCTATAA 930 39.89 MAFLEVKQKLLHEIEALGFSRAQAARALHSTGNVSSEDAINWIVDHENDPDIDQMPPVAVEIDIESPEPFHITEEMKMKANELRDQILKQKEKEEKELERQREKDRIRSGKELQEAKRMAEETERKRYIDSRQVEKQEEKKAREKVLQKLEQDKMERKKNLVMPSQRSGSLATKAITIEAGEKDGLRALNSATSVSKTVSMRECLRSLRHHQKDESDKVRNAFQTLSTYVRNVARNPDEERFRKIPLSNPLFQERVGSSKGGIEFLELCGFRREGDFLYLPRDKVDRELLVTAGSLLESALTNPFFGIL 309
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 8952864 8958654 + Tan0018775.1 Tan08g0796 760688
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0796 309 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
Tan08g0796 309 Gene3D - 8 53 - -
Tan08g0796 309 Pfam PUB domain 217 289 IPR018997 -
Tan08g0796 309 Gene3D - 203 298 - -
Tan08g0796 309 PANTHER F13M7.16 PROTEIN 1 309 - -
Tan08g0796 309 SUPERFAMILY PUG domain-like 202 305 IPR036339 -
Tan08g0796 309 CDD UBA_PUB_plant 5 53 - -
Tan08g0796 309 Pfam UBA-like domain 8 54 IPR015940 -
Tan08g0796 309 SUPERFAMILY UBA-like 5 57 IPR009060 GO:0005515(InterPro)
Tan08g0796 309 Coils Coil 73 126 - -
Tan08g0796 309 MobiDBLite consensus disorder prediction 94 126 - -
Tan08g0796 309 SMART PGNneu 221 282 - -
Tan08g0796 309 Coils Coil 133 156 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g2294 Tan-Chr6:74063945 Tan08g0796 Tan-Chr8:8952864 7.00E-58 dispersed
Tan08g0796 Tan-Chr8:8952864 Tan11g1763 Tan-Chr11:18310174 1.20E-06 dispersed
Tan08g0796 Tan-Chr8:8952864 Tan08g0797 Tan-Chr8:8953899 1.60E-115 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0796 - - - 0.0