Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0797 ATGCCCCCGGTAGCAGTAGAGATTGATATTGAATCTCCTGAACCATTCCATATCACAGAGGAAATGAAAATGAAAGCTAATGAACTAAGGGATCAAATTCTGAAACAAAAGGAAAAAGAAGAAAAAGAGTTAGAAAGACAAAGGGAGAAGGATAGAATTCGTTCTGGTAAAGAACTGCAAGAAGCAAAAAGAATGGCCGAAGAAACTGAAAGGAAACGTTATATAGATTCTAGGCAAGTTGAGAAACAGGAGGAGAAAAAAGCAAGAGAAAAAGTTCTACAAAAACTTGAACAAGATAAGATGGAAAGAAAGAAGAATCTTGTAATGCCCTCTCAAAGGTCTGGAAGCCTTGCTACAAAAGCTATCACAATAGAAGCAGGGGAAAAGGACGGACTTAGAGCACTGAATTCAGCAACTTCAGTTAGTAAAACAGTCTCCATGAGAGAATGCTTAAGGTCTCTTAGGCACCATCAAAAGGATGAATCTGACAAAGTGAGAAATGCCTTCCAAACCCTCTCCACCTATGTTAGAAATGTAGCAAGAAATCCTGATGAGGAAAGGTTTAGGAAGATTCCACTCAGTAATCCTTTGTTCCAGGAAAGAGTTGGGAGTTCGAAAGGAGGGATTGAGTTTCTTGAGCTTTGTGGCTTTCGGAGAGAAGGAGACTTTCTATACCTTCCACGTGATAAAGTCGACCGGGAACTTTTAGTCACTGCTGGATCACTTCTGGAATCTGCATTGACAAATCCCTTTTTTGGTATTCTATAA 768 39.58 MPPVAVEIDIESPEPFHITEEMKMKANELRDQILKQKEKEEKELERQREKDRIRSGKELQEAKRMAEETERKRYIDSRQVEKQEEKKAREKVLQKLEQDKMERKKNLVMPSQRSGSLATKAITIEAGEKDGLRALNSATSVSKTVSMRECLRSLRHHQKDESDKVRNAFQTLSTYVRNVARNPDEERFRKIPLSNPLFQERVGSSKGGIEFLELCGFRREGDFLYLPRDKVDRELLVTAGSLLESALTNPFFGIL 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8953899 8958654 + Tan0018775.2 Tan08g0797 760689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0797 255 Pfam PUB domain 163 235 IPR018997 -
Tan08g0797 255 Coils Coil 79 102 - -
Tan08g0797 255 Coils Coil 19 72 - -
Tan08g0797 255 SMART PGNneu 167 228 - -
Tan08g0797 255 PANTHER F13M7.16 PROTEIN 1 255 - -
Tan08g0797 255 Gene3D - 149 244 - -
Tan08g0797 255 SUPERFAMILY PUG domain-like 148 251 IPR036339 -
Tan08g0797 255 MobiDBLite consensus disorder prediction 30 87 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0797 Tan-Chr8:8953899 Tan11g1763 Tan-Chr11:18310174 1.00E-06 dispersed
Tan08g0796 Tan-Chr8:8952864 Tan08g0797 Tan-Chr8:8953899 1.60E-115 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0797 - - - 0.0