Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0803 ATGGATAGCCCTACGACGGCGCCGAGCTCAGCCCCTAATTCGTCACCTGTCTCAAATCCTGGTTCAAATGATGAAACCCCGCGTGTTAAATTCCTGTGCAGTTTCTTGGGAAGTATAATGCCTCGGCCCCAGGATGGCAAGCTTCGGTATGTTGGGGGAGAGACGAGGATTGTGAGTGTTCCGCGGGATATTACATATGAAGAGTTGATGATTAAGATGAGGGAACTTTATGAAGGGGCTGCTGTACTGAAGTACCAGCAACCAGATGAGGACCTTGATGCTCTTGTGTCTGTTGTCAATGATGATGATGTGGTTAACATGATGGAAGAGTATGATAAGGTGGGTTTGAGCGACGGGTTCACTAGGCTCAGGATATTCTTGTTTTCACATCCTGATCAAGATAGTTCCTTGCCCTTTGTGGATGGGGATGAGAGGGATACTGAGAGGCGATATGTGGATGCCCTTAATAATTCAAATGACATGAATGATTTTGCTAGACAGCAGCAGCCTGATTCCCCTGTAATCAGTGGCATAGACGACATGCACGGGTCAGAACATTTTTTGAATCCAATGAGTATTGAAGGTAGTCTTCACACCCAAAGGAGTTGTGAGCCCTTGTCACAATATCACCTGCATCAGCTCACAATCCCTCATGTTGGATCTGGGCAGCAGCAACAATCTGTAGCTCAAAGGTATAGTGAAATGGAAGCTCCATGGAGTCCTGCTTTCCTTTCACCCAGGCATCATGGTCCATATGATTCAAGACCGGTGGGAGAATATCCATCTTCTCCGTCTGCGCGATACCGGATGCCATTCCCAGATTTTCCAGATAAATATTTGGAAAGAATGCCTGAAGACTATGCAAGGCAGCAAATGACTCACCAGCATATGTATGAACATCAACCGCAGTATAATGAGAATGTTGTCTGGCTTCCAAATGGAACTATTAGTGAAAAGTCAGGTTTCCCCGGTAATATATTACATGGACACGGTGTTCCTGATGGGAATAGTTCTTGTGAACACTGCCGTGCAAATTTTCATCGGTATCAAACACCCGTGGAGCAACCTAATATGTTAAATGGACTTCCCCCTGAATACCCTCAGAATAGGGAGGCCTTGATGCAAAAAGCAGACATGAAGTTCCATCATGGTGTTTTTCCAAATGAGCAAAATATTAATGATCATCGATCTGCTTATAGTGAGACACCACCTCATGAGAGAGGATGGATTATGCAACATCAGATGAGCGTGCGGGGGGATGACACGAGAGCACATGTTTCTGGGGCTGGGCGATTGAATGATCACTACATTGTGGATGGTCCTGGCTCAAATTTTCCTCCAACACAAAGTAATATTACTGATGGCTACCACGTGTCCATGAATTTTCATGATGAGGTATTCCGTGACCAGGTTGTGCCTAGTGGGCCACATATGTGTGTTCCTCCTCCTGAAGATCGTGGTGTTGGCTATATGAATATGCCTTACGGATATGGAGGAGATCCTCAATATCCTCCAATGGCGCACAGGCATATGCCTGGAAATGCCTTGTGGCGAAATGTTCAGAATCCATCACATGTTGCTCCTGCTTATGAAGGAGCCGTTTCCCTTCAGCAAGGGAATGCTACTGTAAATCCAGGATATGTCCAGGGTAGTCCACGGATTCATATGGGTATGGACCACCAAAATCCTTGGCATGAATCCTCACAGAAAATGTTGGGTATTGAGGGAGCAACTGGTTCGGAGCATTTACCTGCACATATTTTGAAGACTAGCTCCACCACTGTTGGCCATGACAATCAACGCTTCCCGAGTTTAGAACATATTCAACCACATCTAGATAAGATAAACCTTGTCGCTTCTCCTGTGCTGAGGTCAGATTCATCTTCAGCAGTTATTCATGAAAAAATGGTTGCACCTTTTCATTCTAGCCAAAATCCACAACCAAGGGCTGTTAGTGTGGTTAATGAAGCTATGATGATGGAAAGAAACATTGTGCCTGGAGAAGGAAACGGACACATGATAACAGATATGGGGAAAGTTGACATATCTAATGCACACATTGTTTCTCATCCAGAGCAGAATAACACTGATGTTACATATTCCAAGGTCACACCCCATGAATTGTTAAATTCAAATTGCACAAACACTCCTGTAGAGAATGGTGATGGCTTGAAACCAGCTGAAGAGACTCTTGAAGAGCCAAAACTTTCTGTCAACCGTCTGAGATTCTTACCTGAGTTGATTGCATCTGTGAAGAGAGCAGCATTAGAAGTATCTGAAGAGGCAATGGTCGAAGAAACTGCTTCAGGGAGACCTGAATCAATAGGCAAAAAAGAGACTGCAAATGAGAATGCCCATGAAGAACCTGAGTTGGAAACTGATAGTGACCATCAAAGCTCCGGAATTGAGCCCACAAAGGCAGAAGCAGAAGCCATTTCAAGAGGATTACAAACAATTAAAAATGATGATCTGGAGGAGATTCGTGAACTAGGGTCTGGGACTTATGGTGCTGTTTATCATGGGAAATGGAGAGGTTCTGATGTTGCAATAAAGAGGATCAAAGCTAGCTGTTTTGCTGGACGACCCTCAGAAAGGGAACGCCTGATTGCGGATTTTTGGAAGGAAGCTTTGATATTAAGTTCTTTACACCATCCAAATGTTGTTTCCTTCTATGGTATTGTTCGTGATGGTCCTGATGGGTCCTTAGCAACAGTGACAGAATTCATGGTAAATGGATCATTAAAACAGTTTTTGCACAAGAAGGACAGGACCATTGATCGTCGTAAGAGACTCATTATAGCTATGGATGCTGCATTTGGGATGGAATATTTGCATGGGAAGAATATTGTACATTTTGATTTGAAATGCGAAAACCTTTTAGTGAATATGAGAGACCCTCAGAGGCCTGTTTGCAAGATTGGTGATTTGGGATTGTCAAAGGTGAGACAACACACGTTAGTATCGGGAGGGGTTCGTGGAACTTTGCCCTGGATGGCACCCGAGCTTCTTAGCGGGAAAAGTAATATGGTGACGGAGAAGATTGATGTTTACTCATTCGGGATCGTTATGTGGGAACTGCTCACGGGAGATGAACCATATTCAGATATGCATTGTGCTTCTATAATTGGAGGAATCGTGCACAATTGTTTACGTCCAGAAATCCCGACATGGTGCGACCCAGAATGGAAAGCTTTAATGTCGAGCTGTTGGGACTCGGACCCAGCTATGAGACCATCATTTTCAGAAATTTCTCAGAAGCTAAGGAATATGGCAGCTGCAATGAATGTGAAATAG 3294 44.14 MDSPTTAPSSAPNSSPVSNPGSNDETPRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVPRDITYEELMIKMRELYEGAAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKVGLSDGFTRLRIFLFSHPDQDSSLPFVDGDERDTERRYVDALNNSNDMNDFARQQQPDSPVISGIDDMHGSEHFLNPMSIEGSLHTQRSCEPLSQYHLHQLTIPHVGSGQQQQSVAQRYSEMEAPWSPAFLSPRHHGPYDSRPVGEYPSSPSARYRMPFPDFPDKYLERMPEDYARQQMTHQHMYEHQPQYNENVVWLPNGTISEKSGFPGNILHGHGVPDGNSSCEHCRANFHRYQTPVEQPNMLNGLPPEYPQNREALMQKADMKFHHGVFPNEQNINDHRSAYSETPPHERGWIMQHQMSVRGDDTRAHVSGAGRLNDHYIVDGPGSNFPPTQSNITDGYHVSMNFHDEVFRDQVVPSGPHMCVPPPEDRGVGYMNMPYGYGGDPQYPPMAHRHMPGNALWRNVQNPSHVAPAYEGAVSLQQGNATVNPGYVQGSPRIHMGMDHQNPWHESSQKMLGIEGATGSEHLPAHILKTSSTTVGHDNQRFPSLEHIQPHLDKINLVASPVLRSDSSSAVIHEKMVAPFHSSQNPQPRAVSVVNEAMMMERNIVPGEGNGHMITDMGKVDISNAHIVSHPEQNNTDVTYSKVTPHELLNSNCTNTPVENGDGLKPAEETLEEPKLSVNRLRFLPELIASVKRAALEVSEEAMVEETASGRPESIGKKETANENAHEEPELETDSDHQSSGIEPTKAEAEAISRGLQTIKNDDLEEIRELGSGTYGAVYHGKWRGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVRQHTLVSGGVRGTLPWMAPELLSGKSNMVTEKIDVYSFGIVMWELLTGDEPYSDMHCASIIGGIVHNCLRPEIPTWCDPEWKALMSSCWDSDPAMRPSFSEISQKLRNMAAAMNVK 1097
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9040422 9046175 + Tan0014232.1 Tan08g0803 760695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0803 1097 Pfam PB1 domain 44 128 IPR000270 GO:0005515(InterPro)
Tan08g0803 1097 MobiDBLite consensus disorder prediction 759 808 - -
Tan08g0803 1097 MobiDBLite consensus disorder prediction 759 803 - -
Tan08g0803 1097 SUPERFAMILY Protein kinase-like (PK-like) 812 1085 IPR011009 -
Tan08g0803 1097 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 48 130 - -
Tan08g0803 1097 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 912 1097 - -
Tan08g0803 1097 ProSitePatterns Serine/Threonine protein kinases active-site signature. 949 961 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0803 1097 ProSitePatterns Protein kinases ATP-binding region signature. 830 851 IPR017441 GO:0005524(InterPro)
Tan08g0803 1097 SMART PB1_new 43 128 IPR000270 GO:0005515(InterPro)
Tan08g0803 1097 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 817 911 - -
Tan08g0803 1097 Gene3D Phosphorylase Kinase; domain 1 809 910 - -
Tan08g0803 1097 PANTHER SERINE-THREONINE PROTEIN KINASE 7 1091 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan08g0803 1097 MobiDBLite consensus disorder prediction 709 728 - -
Tan08g0803 1097 Gene3D - 47 130 - -
Tan08g0803 1097 CDD STKc_MAP3K-like 830 1087 - -
Tan08g0803 1097 Gene3D Transferase(Phosphotransferase) domain 1 911 1097 - -
Tan08g0803 1097 Pfam Protein tyrosine and serine/threonine kinase 826 1087 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0803 1097 MobiDBLite consensus disorder prediction 1 25 - -
Tan08g0803 1097 CDD PB1_UP2 32 128 - -
Tan08g0803 1097 SMART serkin_6 824 1093 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0803 1097 PRINTS Tyrosine kinase catalytic domain signature 1014 1036 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0803 1097 PRINTS Tyrosine kinase catalytic domain signature 1058 1080 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0803 1097 PRINTS Tyrosine kinase catalytic domain signature 906 919 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0803 1097 PRINTS Tyrosine kinase catalytic domain signature 943 961 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0803 1097 ProSiteProfiles Protein kinase domain profile. 824 1090 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0803 1097 SUPERFAMILY CAD & PB1 domains 45 134 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan04g1301 Tan-Chr4:12735110 Tan08g0803 Tan-Chr8:9040422 8.90E-25 dispersed
Tan08g0803 Tan-Chr8:9040422 Tan09g1517 Tan-Chr9:67127064 5.10E-140 dispersed
Tan08g0803 Tan-Chr8:9040422 Tan05g3036 Tan-Chr5:82323651 4.80E-138 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67936 PF07714 PK_Tyr_Ser-Thr 2.50E-61 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0803 - - - 0.0