Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0848 ATGGCTGCTGATTCTTCCTTTGATGAGAAAAGAGAACTTGTTTATGAAATTTCAAAGACACATGGTGCATGTGAGACACTGCAATCATGGAGCCGTCAAGACATTCTACAAGTCTTGTGTGCAGAGATGGGGAAAGAAAGAAAATATACTGGCTTGACGAAGCAGAAAATAATAGAGCATCTTTTGAGACTCATATCCGAAAAGAAGTCATCAGTGTCTGAGGTTTTGAAAAACCTTGAGCCACAGTCTCCTGCAGCTGGCCATAAAACTACCAAAAGGCAGAGGAAATCTGATCAGCCAGTTCAGGTTTCTGTTCCTACAAGTGACTTTCCAACCAGTAGTACGCATAATGATTCTGGTCATACAGCATGCTGCAAAAACTTGGCTTGTCGAGCGACTTTAAATCCAGAAGATGCATTTTGTAGAAGGTGTTCTTGCTGCATCTGTCGTCAGTATGATGACAACAAGGATCCTAGCTTGTGGATAAGTTGCAGCGCGGAGCCTCCATTTCTAGGTGATTCGTGTAACATGTCATGTCATCTTGAATGTGCTTTAAAAGATGTAAGATCTGGAATTTCGAAAGCTGGACAAAGCAGGGGAATTGATGGTAGCTTCTATTGTGTGTCTTGTGGGAAATTAAATGATTTGCTTGGGTGCTGCAGAAAACAACTAGTTCATGCAAAAGATACAAGAAGAGTCGACATACTTTGTTACCGTGTCTCTTTGAGCCAAAAGCTTCTCCATGGAACTGAAAAGTATAAAGTGCTTTATCAGATTGTCGATGACGCAGTGAGGAAGCTTGAAGCTGAAGTGGGACCAATAGCCGGTGTACCAGTAAAGATGGGTAGAGGTATTGTGAACAGGCTTTCATCGGGTCCCGAAGTTCAAAAACTCTGTGCTTCTGCTATTGAGTTACTGGACTCAATGCACTCCAGCAAATCCTTGCATCTTCCGCCTAATCCTGACATACAAGATGCAAATTTTGTTCCTGAAAATATGGTTAGAGTCGAAGATGTTCGGTTGACGTCCCTCACTCTGGTTTTGAGTTGTGAATGTGGGTCTTCTGAGAACCAGGTTGGCTTCACCATATGGCATCGTAAGGCAGATGATGCAGATTATCCGATCGAGCCGACATGTATTCTACGACAACCGAAGACAAGGTTTGTTGTGATGGGACTATCACCTGCTACTGAATATCATTTCAAAATTGTTCTCTTTGAGGGGACGAGAGAGTTGAGGAAGTTTGAAGTTCAGTTCTCAACAATTACGGAGGTGGAAGAGAATCCAGGCTGCTTAGAAATTGAGAGAAGCCAAAGCCACGCAACCAACTGCAGTGACCTTTCTAATCCTTCCTCGGTTGAAGACGAAACTACCGACATTCTTCCCTATGGCGATCGAACTGATAATCTAGGAAAAAACTCCACTGCCTATTCGAAGGGCACCGAAATGCTTTTCTCTGCTAATTTATCTACCGATGCTTTTAACCTCAGTGACAATGGTGAAGAAGGAACACCTACAGGTACGGTTGCTGTGCTGGATAAGGCAAATGCTGAAGGAATAGTTGGTTTGATTCCCAACTCTGTTGGATCAAAGCTCGAGAACAAGCACGGACCACCTGCCCCAAAACTCAACACCGATACTCCGTTAAGCGCCCTTGTTCGGTCTGGAATGCAGTGTGAGCCATTTGTTGGCTGTTCTGAAGATGGCTTGCCTATTACTCCCTGCAAGCTTGAAGTGCTAAAGGATAGTCTTGGAAGGGCTGAGAGACTGACATCCAGCTGCATGGGCCTTGACAACAGGACTCGAAAAGGAGGGGAACCCCAAGATGGTGGCACATCGAAGATGCGAACTGGGGAAAGGCAGGACGACAAATGTGCAGAAAATGGTGTTTCAGATCGGGATTTCGAGCACTATGTGAAGGTAATTAGATGGTTAGAGTGCGAGGGACATATCGAAAAGAACTTCAGGCAGAAGTTTCTCACTTGGTATAGCTTGAGAGCATCCCAACAAGAAGTGAAGATTGTGAAGGTGTTTGTTGATACCTTCATTGAAGATCCAGCATCTCTTGCAGAACAACTTGTTGATACTTTTTCTGAAAGCATTTCGAGCAAAAAACCGACGACTACACCGCCCGGGTTCTGCATGAAGCTGTGGCACTGA 2160 44.35 MAADSSFDEKRELVYEISKTHGACETLQSWSRQDILQVLCAEMGKERKYTGLTKQKIIEHLLRLISEKKSSVSEVLKNLEPQSPAAGHKTTKRQRKSDQPVQVSVPTSDFPTSSTHNDSGHTACCKNLACRATLNPEDAFCRRCSCCICRQYDDNKDPSLWISCSAEPPFLGDSCNMSCHLECALKDVRSGISKAGQSRGIDGSFYCVSCGKLNDLLGCCRKQLVHAKDTRRVDILCYRVSLSQKLLHGTEKYKVLYQIVDDAVRKLEAEVGPIAGVPVKMGRGIVNRLSSGPEVQKLCASAIELLDSMHSSKSLHLPPNPDIQDANFVPENMVRVEDVRLTSLTLVLSCECGSSENQVGFTIWHRKADDADYPIEPTCILRQPKTRFVVMGLSPATEYHFKIVLFEGTRELRKFEVQFSTITEVEENPGCLEIERSQSHATNCSDLSNPSSVEDETTDILPYGDRTDNLGKNSTAYSKGTEMLFSANLSTDAFNLSDNGEEGTPTGTVAVLDKANAEGIVGLIPNSVGSKLENKHGPPAPKLNTDTPLSALVRSGMQCEPFVGCSEDGLPITPCKLEVLKDSLGRAERLTSSCMGLDNRTRKGGEPQDGGTSKMRTGERQDDKCAENGVSDRDFEHYVKVIRWLECEGHIEKNFRQKFLTWYSLRASQQEVKIVKVFVDTFIEDPASLAEQLVDTFSESISSKKPTTTPPGFCMKLWH 719
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10557814 10562235 + Tan0007632.1 Tan08g0848 760740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0848 719 PANTHER VIN3-LIKE PROTEIN 2-RELATED 5 719 IPR044514 GO:0010048(InterPro)|GO:0040029(InterPro)
Tan08g0848 719 MobiDBLite consensus disorder prediction 97 118 - -
Tan08g0848 719 MobiDBLite consensus disorder prediction 77 118 - -
Tan08g0848 719 CDD FN3 330 404 IPR003961 GO:0005515(InterPro)
Tan08g0848 719 Pfam PHD - plant homeodomain finger protein 125 245 IPR032881 -
Tan08g0848 719 SUPERFAMILY Fibronectin type III 334 405 IPR036116 GO:0005515(InterPro)
Tan08g0848 719 MobiDBLite consensus disorder prediction 602 625 - -
Tan08g0848 719 MobiDBLite consensus disorder prediction 596 625 - -
Tan08g0848 719 ProSiteProfiles Fibronectin type-III domain profile. 329 428 IPR003961 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0848 Tan-Chr8:10557814 Tan09g1695 Tan-Chr9:68552650 2.90E-240 dispersed
Tan08g0848 Tan-Chr8:10557814 Tan09g1694 Tan-Chr9:68552650 2.90E-240 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0848 - - - 0.0