Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0866 ATGGAGAAGAAGAAAGTGATGGAAGAAAACAAGTTGCAAAGAAGCCATTTTGATGTATTAGGACTTTGCTGTTCTTCAGAAATCCCTCTGATTGAAAACATCCTCAAACCCCTCGAAGGAATCAAAGACATTTCTGTCATTGTCCCTACAAGAACTCTCATTGTCGTCCATGATTCTCTCCTCACTTCCCAGCTTCAAATTGTGAAAGCTCTAAATGAAGCAAGATTGGAAGCAAATGTACAATTAAATGGAAAGGGAATTAGCAAGAAGAAATGGCCAAGTCCTTTTGCAATAGCCAGTGGGTTGCTTCTAACGGCGTCGTTTTTGAAGTATGTGTACCACCCCTTGCGGTGGCTGGCCGTCGCCGCCGTCGCCGCCGGCATCTTCCCGATTCTTCTAAAAGCCATTTCTGCCATCCGCCACCTTAGGATCGATGTCAACATTCTTGCTGTTATTGCTGTTGTGGGGACAATTGCTATGAATGACTACATGGAAGCTGGGAGCATAGTGTTTTTGTTTTCCATTGCTGAATGGCTTGAGTCAAGAGCAAGCCACAAGGCCAATGCTGCCATGTCCTCATTGATGAGTTTAGCCCCTCAAAAAGCAACCATAGCTGAAACTGGAGAGGTTGTGGATGCAAAAGAGGTCAAATTGAGCACTGTTTTGGCTGTGAAGGCTGGAGAAGTTATTCCCATTGATGGCATTGTTGTGGAAGGAAAATGTGAAGTTGATGAGAAAAATTTAACTGGAGAATCTTTTCCAGTTCCTAAACAAAAAGATTCCCTTGTTTGGGCTGGTACCATCAACTTAAATGGATATATTAGTGTTCAAACTACTGTTGTAGCTGAGGATTGTGTGGTGGCAAAAATGGCTGAGCTTGTAGAAGAAGCTCAAAATAACAAATCCAAAACTCAGAGATTCATTGATGAATGTGCCAAATATTACACCCCAGCTGTTCTTGTCATATCAGCTTGTCTTGCAGCCATTCCAGCTGCATTGAGAGTTCACAATCTCAGCCATTGGTTTCACTTAGCTCTGGTGGTCTTAGTGAGTGCATGTCCCTGTGCCCTAATCCTCTCCACCCCGGTCGCCGCCTTCTGCGCCCTTACGAAGGCCGCCATGGCCGGAGTTCTGATCAAAGGCGGCGACCACCTTGAAATTCTTGCAAAGATTAAGGTTATGGCCTTCGACAAGACTGGCACAATTACTAAGGGTGAATTTGTAGTAACAGATTTTCGAGCTCTTCAAGATGATATTAGCTTGGAATCCTTGCTTTATTGGGTTTCAAGCATTGAGAGCAAATCGAGCCATCCAATGGCAGCTGCCCTTGTCAACCATGGAAAGTTGCTTACTGTTGATATTAAACCCGAAAACGTTGAGGAATTTGAGAATTTTCCAGGAGAAGGTGTTCGTGGGAAAATAGATGGGAATAATATTTACATTGGAAGTAGAAAAATTGCTGCAAGATCTGGCTGCACAACAGTTTCGAACATAGACGATGAGACGAAACAAGGGCAAACCCGAGGATATGTATTTTGTGGAACGACGTTAGTCGGATCCTTCGGTCTTTCGGATGCTTGTCGATCGGGAGTTAAAGAGGCGATCGAGGAGATTAAGAGTTTTGGTATAAAAACAGCTATGCTCACTGGAGATTGTAATGCAGCAGCCATGCATGCCCAACAACAGCTTGGGAATGCGCTGGATGTAATCCATTCAGAACTTTTACCAAAGGAGAAGGCAAATATCATAAAAGGATTCAAAAGGGATGGACCAACTGCCATGGTTGGAGATGGCTTAAATGATACTCCAGCATTAGCCACGGCTGACATTGGCATATCAATGGGGGTTTCAGGTTCAGCACTGGCCACTGAAACTGGGAATGTGATCCTAATGTCAAATGACTTGAGAAAAATCCCAAAAGCCATCAAACTAGCAAAGAAATCCCATGCAAAAGTAGTTCAAAACGTCATTTTGTCCATCGGTACGAAGACCGCAATCCTCGGCCTGGCATTCGCTGGGCATCCGCTCGTTTGGGCGGCCGTTCTCGCCGATGTCGGTACCTGTCTATTGGTCATCTTGAACAGCATGCTCCTTTTGAGAGGAACTGATCACAAACATGAGAAGAAATGTTGCAAATCTTCCAAACCATGTTCGACGAAACATCGACGATGCAATGGCAATAATGGCCATGGCCATGATCATCATCACCATAATCATGGATGCCATGTCGTCGATGATCGATCACCTAGTCGAGAGAATGATGTTCAAAAGGATTATAGGCTTCAGCTTCTTCATGATCACAATGGTGATTGTGGAGTGAACCAAGAGAATCATGGATGTGGTGAGTGTGAGGAAACTAATGTGCCCCATCAGAAAGAACATAGATTTCATCACAGCCATGTTTCAAATCAATGTGAGAAAAACCCACTTGAGAAAGAGAATAATGGGAATTCTTCAAGGAAAGTGGCTGAATCAAATTGTAATTGCCACTCCCATCATTTTACTATTGACATTCATGAAGGTACTGATTTTGAGAGAGTAAATCAAAAATAA 2553 43.52 MEKKKVMEENKLQRSHFDVLGLCCSSEIPLIENILKPLEGIKDISVIVPTRTLIVVHDSLLTSQLQIVKALNEARLEANVQLNGKGISKKKWPSPFAIASGLLLTASFLKYVYHPLRWLAVAAVAAGIFPILLKAISAIRHLRIDVNILAVIAVVGTIAMNDYMEAGSIVFLFSIAEWLESRASHKANAAMSSLMSLAPQKATIAETGEVVDAKEVKLSTVLAVKAGEVIPIDGIVVEGKCEVDEKNLTGESFPVPKQKDSLVWAGTINLNGYISVQTTVVAEDCVVAKMAELVEEAQNNKSKTQRFIDECAKYYTPAVLVISACLAAIPAALRVHNLSHWFHLALVVLVSACPCALILSTPVAAFCALTKAAMAGVLIKGGDHLEILAKIKVMAFDKTGTITKGEFVVTDFRALQDDISLESLLYWVSSIESKSSHPMAAALVNHGKLLTVDIKPENVEEFENFPGEGVRGKIDGNNIYIGSRKIAARSGCTTVSNIDDETKQGQTRGYVFCGTTLVGSFGLSDACRSGVKEAIEEIKSFGIKTAMLTGDCNAAAMHAQQQLGNALDVIHSELLPKEKANIIKGFKRDGPTAMVGDGLNDTPALATADIGISMGVSGSALATETGNVILMSNDLRKIPKAIKLAKKSHAKVVQNVILSIGTKTAILGLAFAGHPLVWAAVLADVGTCLLVILNSMLLLRGTDHKHEKKCCKSSKPCSTKHRRCNGNNGHGHDHHHHNHGCHVVDDRSPSRENDVQKDYRLQLLHDHNGDCGVNQENHGCGECEETNVPHQKEHRFHHSHVSNQCEKNPLEKENNGNSSRKVAESNCNCHSHHFTIDIHEGTDFERVNQK 850
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10975454 10987338 + Tan0012768.1 Tan08g0866 760758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0866 850 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 7 815 IPR051014 GO:0016020(PANTHER)|GO:0022857(PANTHER)|GO:0055085(PANTHER)
Tan08g0866 850 CDD P-type_ATPase_HM 96 697 - -
Tan08g0866 850 Gene3D - 9 82 - -
Tan08g0866 850 FunFam Putative cadmium/zinc-transporting ATPase 3 9 82 - -
Tan08g0866 850 Pfam haloacid dehalogenase-like hydrolase 391 609 - -
Tan08g0866 850 Gene3D - 183 298 - -
Tan08g0866 850 MobiDBLite consensus disorder prediction 798 824 - -
Tan08g0866 850 SUPERFAMILY Calcium ATPase, transmembrane domain M 147 486 IPR023298 -
Tan08g0866 850 NCBIfam HAD-IC family P-type ATPase 169 672 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan08g0866 850 SUPERFAMILY HMA, heavy metal-associated domain 9 79 IPR036163 GO:0046872(InterPro)
Tan08g0866 850 Gene3D - 406 527 IPR023299 GO:0000166(InterPro)
Tan08g0866 850 NCBIfam cadmium family heavy metal-translocating P-type ATPase 146 700 - -
Tan08g0866 850 ProSitePatterns E1-E2 ATPases phosphorylation site. 397 403 IPR018303 -
Tan08g0866 850 MobiDBLite consensus disorder prediction 728 751 - -
Tan08g0866 850 FunFam Putative cadmium/zinc-transporting ATPase 3 406 527 - -
Tan08g0866 850 SUPERFAMILY HAD-like 394 696 IPR036412 -
Tan08g0866 850 ProSiteProfiles Heavy-metal-associated domain profile. 13 79 IPR006121 GO:0046872(InterPro)
Tan08g0866 850 PRINTS P-type cation-transporting ATPase superfamily signature 244 258 - -
Tan08g0866 850 PRINTS P-type cation-transporting ATPase superfamily signature 395 409 - -
Tan08g0866 850 PRINTS P-type cation-transporting ATPase superfamily signature 541 551 - -
Tan08g0866 850 PRINTS P-type cation-transporting ATPase superfamily signature 619 631 - -
Tan08g0866 850 PRINTS P-type cation-transporting ATPase superfamily signature 595 614 - -
Tan08g0866 850 SFLD C1.7: P-type atpase like 377 647 - -
Tan08g0866 850 SUPERFAMILY Calcium ATPase, transduction domain A 209 294 IPR008250 -
Tan08g0866 850 NCBIfam heavy metal translocating P-type ATPase 146 698 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Tan08g0866 850 FunFam Copper-transporting ATPase 1, putative 184 298 - -
Tan08g0866 850 Pfam E1-E2 ATPase 197 373 - -
Tan08g0866 850 SFLD p-type atpase 377 647 IPR044492 -
Tan08g0866 850 MobiDBLite consensus disorder prediction 798 818 - -
Tan08g0866 850 Gene3D - 388 646 IPR023214 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0866 Tan-Chr8:10975454 Tan09g1717 Tan-Chr9:68720537 5.10E-297 dispersed
Tan08g0866 Tan-Chr8:10975454 Tan08g0867 Tan-Chr8:10979608 0.00E+00 tandem
Tan03g0595 Tan-Chr3:60844816 Tan08g0866 Tan-Chr8:10975454 2.50E-61 transposed
Tan05g1626 Tan-Chr5:41665654 Tan08g0866 Tan-Chr8:10975454 4.00E-68 transposed
Tan08g0866 Tan-Chr8:10975454 Tan09g1716 Tan-Chr9:68720537 5.10E-297 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0866 K01534 - csv:101203668 1334.32