Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0867 ATGAATGACTACATGGAAGCTGGGAGCATAGTGTTTTTGTTTTCCATTGCTGAATGGCTTGAGTCAAGAGCAAGCCACAAGGCCAATGCTGCCATGTCCTCATTGATGAGTTTAGCCCCTCAAAAAGCAACCATAGCTGAAACTGGAGAGGTTGTGGATGCAAAAGAGGTCAAATTGAGCACTGTTTTGGCTGTGAAGGCTGGAGAAGTTATTCCCATTGATGGCATTGTTGTGGAAGGAAAATGTGAAGTTGATGAGAAAAATTTAACTGGAGAATCTTTTCCAGTTCCTAAACAAAAAGATTCCCTTGTTTGGGCTGGTACCATCAACTTAAATGGATATATTAGTGTTCAAACTACTGTTGTAGCTGAGGATTGTGTGGTGGCAAAAATGGCTGAGCTTGTAGAAGAAGCTCAAAATAACAAATCCAAAACTCAGAGATTCATTGATGAATGTGCCAAATATTACACCCCAGCTGTTCTTGTCATATCAGCTTGTCTTGCAGCCATTCCAGCTGCATTGAGAGTTCACAATCTCAGCCATTGGTTTCACTTAGCTCTGGTGGTCTTAGTGAGTGCATGTCCCTGTGCCCTAATCCTCTCCACCCCGGTCGCCGCCTTCTGCGCCCTTACGAAGGCCGCCATGGCCGGAGTTCTGATCAAAGGCGGCGACCACCTTGAAATTCTTGCAAAGATTAAGGTTATGGCCTTCGACAAGACTGGCACAATTACTAAGGGTGAATTTGTAGTAACAGATTTTCGAGCTCTTCAAGATGATATTAGCTTGGAATCCTTGCTTTATTGGGTTTCAAGCATTGAGAGCAAATCGAGCCATCCAATGGCAGCTGCCCTTGTCAACCATGGAAAGTTGCTTACTGTTGATATTAAACCCGAAAACGTTGAGGAATTTGAGAATTTTCCAGGAGAAGGTGTTCGTGGGAAAATAGATGGGAATAATATTTACATTGGAAGTAGAAAAATTGCTGCAAGATCTGGCTGCACAACAGTTTCGAACATAGACGATGAGACGAAACAAGGGCAAACCCGAGGATATGTATTTTGTGGAACGACGTTAGTCGGATCCTTCGGTCTTTCGGATGCTTGTCGATCGGGAGTTAAAGAGGCGATCGAGGAGATTAAGAGTTTTGGTATAAAAACAGCTATGCTCACTGGAGATTGTAATGCAGCAGCCATGCATGCCCAACAACAGCTTGGGAATGCGCTGGATGTAATCCATTCAGAACTTTTACCAAAGGAGAAGGCAAATATCATAAAAGGATTCAAAAGGGATGGACCAACTGCCATGGTTGGAGATGGCTTAAATGATACTCCAGCATTAGCCACGGCTGACATTGGCATATCAATGGGGGTTTCAGGTTCAGCACTGGCCACTGAAACTGGGAATGTGATCCTAATGTCAAATGACTTGAGAAAAATCCCAAAAGCCATCAAACTAGCAAAGAAATCCCATGCAAAAGTAGTTCAAAACGTCATTTTGTCCATCGGTACGAAGACCGCAATCCTCGGCCTGGCATTCGCTGGGCATCCGCTCGTTTGGGCGGCCGTTCTCGCCGATGTCGGTACCTGTCTATTGGTCATCTTGAACAGCATGCTCCTTTTGAGAGGAACTGATCACAAACATGAGAAGAAATGTTGCAAATCTTCCAAACCATGTTCGACGAAACATCGACGATGCAATGGCAATAATGGCCATGGCCATGATCATCATCACCATAATCATGGATGCCATGTCGTCGATGATCGATCACCTAGTCGAGAGAATGATGTTCAAAAGGATTATAGGCTTCAGCTTCTTCATGATCACAATGGTGATTGTGGAGTGAACCAAGAGAATCATGGATGTGGTGAGTGTGAGGAAACTAATGTGCCCCATCAGAAAGAACATAGATTTCATCACAGCCATGTTTCAAATCAATGTGAGAAAAACCCACTTGAGAAAGAGAATAATGGGAATTCTTCAAGGAAAGTGGCTGAATCAAATTGTAATTGCCACTCCCATCATTTTACTATTGACATTCATGAAGGTACTGATTTTGAGAGAGTAAATCAAAAATAA 2076 43.26 MNDYMEAGSIVFLFSIAEWLESRASHKANAAMSSLMSLAPQKATIAETGEVVDAKEVKLSTVLAVKAGEVIPIDGIVVEGKCEVDEKNLTGESFPVPKQKDSLVWAGTINLNGYISVQTTVVAEDCVVAKMAELVEEAQNNKSKTQRFIDECAKYYTPAVLVISACLAAIPAALRVHNLSHWFHLALVVLVSACPCALILSTPVAAFCALTKAAMAGVLIKGGDHLEILAKIKVMAFDKTGTITKGEFVVTDFRALQDDISLESLLYWVSSIESKSSHPMAAALVNHGKLLTVDIKPENVEEFENFPGEGVRGKIDGNNIYIGSRKIAARSGCTTVSNIDDETKQGQTRGYVFCGTTLVGSFGLSDACRSGVKEAIEEIKSFGIKTAMLTGDCNAAAMHAQQQLGNALDVIHSELLPKEKANIIKGFKRDGPTAMVGDGLNDTPALATADIGISMGVSGSALATETGNVILMSNDLRKIPKAIKLAKKSHAKVVQNVILSIGTKTAILGLAFAGHPLVWAAVLADVGTCLLVILNSMLLLRGTDHKHEKKCCKSSKPCSTKHRRCNGNNGHGHDHHHHNHGCHVVDDRSPSRENDVQKDYRLQLLHDHNGDCGVNQENHGCGECEETNVPHQKEHRFHHSHVSNQCEKNPLEKENNGNSSRKVAESNCNCHSHHFTIDIHEGTDFERVNQK 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10979608 10987338 + Tan0012768.2 Tan08g0867 760759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0867 691 MobiDBLite consensus disorder prediction 569 592 - -
Tan08g0867 691 Pfam haloacid dehalogenase-like hydrolase 232 450 - -
Tan08g0867 691 SUPERFAMILY HAD-like 235 537 IPR036412 -
Tan08g0867 691 MobiDBLite consensus disorder prediction 639 665 - -
Tan08g0867 691 Gene3D - 229 487 IPR023214 -
Tan08g0867 691 SFLD C1.7: P-type atpase like 218 488 - -
Tan08g0867 691 FunFam Copper-transporting ATPase 1, putative 25 139 - -
Tan08g0867 691 CDD P-type_ATPase_HM 1 538 - -
Tan08g0867 691 NCBIfam HAD-IC family P-type ATPase 10 513 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan08g0867 691 SUPERFAMILY Calcium ATPase, transduction domain A 50 135 IPR008250 -
Tan08g0867 691 NCBIfam heavy metal translocating P-type ATPase 1 539 IPR027256 GO:0006812(InterPro)|GO:0016020(InterPro)|GO:0019829(InterPro)
Tan08g0867 691 SUPERFAMILY Calcium ATPase, transmembrane domain M 3 327 IPR023298 -
Tan08g0867 691 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 1 657 IPR051014 GO:0016020(PANTHER)|GO:0022857(PANTHER)|GO:0055085(PANTHER)
Tan08g0867 691 Pfam E1-E2 ATPase 38 214 - -
Tan08g0867 691 Gene3D - 24 139 - -
Tan08g0867 691 Gene3D - 247 368 IPR023299 GO:0000166(InterPro)
Tan08g0867 691 PRINTS P-type cation-transporting ATPase superfamily signature 436 455 - -
Tan08g0867 691 PRINTS P-type cation-transporting ATPase superfamily signature 236 250 - -
Tan08g0867 691 PRINTS P-type cation-transporting ATPase superfamily signature 382 392 - -
Tan08g0867 691 PRINTS P-type cation-transporting ATPase superfamily signature 85 99 - -
Tan08g0867 691 PRINTS P-type cation-transporting ATPase superfamily signature 460 472 - -
Tan08g0867 691 MobiDBLite consensus disorder prediction 639 659 - -
Tan08g0867 691 FunFam Putative cadmium/zinc-transporting ATPase 3 247 368 - -
Tan08g0867 691 ProSitePatterns E1-E2 ATPases phosphorylation site. 238 244 IPR018303 -
Tan08g0867 691 SFLD p-type atpase 218 488 IPR044492 -
Tan08g0867 691 NCBIfam cadmium family heavy metal-translocating P-type ATPase 1 541 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0867 Tan-Chr8:10979608 Tan09g1716 Tan-Chr9:68720537 8.90E-239 dispersed
Tan08g0866 Tan-Chr8:10975454 Tan08g0867 Tan-Chr8:10979608 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0867 K01534 - csv:101203668 1070.07