Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0894 ATGTCGGAAAAGGCATATACCAGATCTTTCAATTTTTTGCAGAATTGTCTTGGTTTCAAAAGTAGGCTCGATATTAGAGAATTGGCAGTAAAGTTTGGGTGTGTTAGGCTGGTTGCTTCAGTTCAAAAGGGATTATCTCTATATGAGGATCGTTTTGTTGCATCGCTGCCAGCTTCTCGACAGGCGAGTGCTGACTTCTCCCGATCAGTATTTACGGCTGTAGCCTTCTACTTGTGTGCAAAAAAACACAAGCTCAAGGTTGACAAAGTTAAGCTCATTGAACTCGGTGGTACATCTGAATCTGAATTCTCATGTGTTGCTACTTCTATGAAGGACTTGTGCTTTGATGTCTTTGGAATCTCTAGTGAAAAGAAAGATCCCAGGGAAACCAAAGGGAACAGAGACCTATTAGACGCATTGCCCGAAAAAAGGAAACTCGAGGATGGTGGTTATTTATCTGATGATTGGCAAAGAGTTTCCAAGATCAAAACAACGCAAGCCAATGAACAAGCCTATAATCAGTGGAAATCCTCTGTCATTGCTTCCAATAACCTGACAAAGACAAAAGTTGGGAAGCGAACCAGACAAACTTCCCTTCACTTTTTTAAGGAAAATAAAGAAACAAATGTTGAGTAG 636 40.57 MSEKAYTRSFNFLQNCLGFKSRLDIRELAVKFGCVRLVASVQKGLSLYEDRFVASLPASRQASADFSRSVFTAVAFYLCAKKHKLKVDKVKLIELGGTSESEFSCVATSMKDLCFDVFGISSEKKDPRETKGNRDLLDALPEKRKLEDGGYLSDDWQRVSKIKTTQANEQAYNQWKSSVIASNNLTKTKVGKRTRQTSLHFFKENKETNVE 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11736484 11744585 - Tan0022754.3 Tan08g0894 760786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0894 211 CDD Orc6_mid 21 117 - -
Tan08g0894 211 Gene3D - 20 117 - -
Tan08g0894 211 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 1 194 IPR020529 GO:0005664(PANTHER)|GO:0005664(InterPro)|GO:0006260(InterPro)|GO:0006270(PANTHER)
Tan08g0894 211 Pfam ORC6 second cyclin-like domain 23 113 IPR054113 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0893 Tan-Chr8:11736484 Tan08g0894 Tan-Chr8:11736484 2.30E-116 tandem
Tan08g0894 Tan-Chr8:11736484 Tan08g0895 Tan-Chr8:11739571 1.30E-116 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0894 K02608 - csv:101204841 337.421