Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0895 ATGGATCTCTCTAACATTGCCCGCAAGCTCGATCTTTCCAACTCCAAAACCCTCATCCGAAAAGCAGGAGAATTTTATCGCCTCTCTGATCTCCATTTCAATTCTTCTGTTATTGGCGTTGGGGAGGTTTGCAAGGCCATAATTTGTTTGGAAATTGCCGCCACAAGATTAGGGATTCTATTTGATAGATCAAGTGCAATCAAGTTAAGCGGGATGTCGGAAAAGGCATATACCAGATCTTTCAATTTTTTGCAGAATTGTCTTGGTTTCAAAAGTAGGCTCGATATTAGAGAATTGGCAGTAAAGTTTGGGTGTGTTAGGCTGGTTGCTTCAGTTCAAAAGGGATTATCTCTATATGAGGATCGTTTTGTTGCATCGCTGCCAGCTTCTCGACAGGCGAGTGCTGACTTCTCCCGATCAGTATTTACGGCTGTAGCCTTCTACTTGTGTGCAAAAAAACACAAGCTCAAGGTTGACAAAGTTAAGCTCATTGAACTCGGTGGTACATCTGAATCTGAATTCTCATGTGTTGCTACTTCTATGAAGGACTTGTGCTTTGATGTCTTTGGAATCTCTAGTGAAAAGAAAGATCCCAGGGAAACCAAAGGGAACAGAGACCTATTAGACGCATTGCCCGAAAAAAGGAAACTCGAGGATGGTGGTTATTTATCTGATGATTGGCAAAGAGTTTCCAAGATCAAAACAACGCAAGCCAATGAACAAGCCTATAATCAGTGGAAATCCTCTGTCATTGCTTCCAATAACCTGACAAAGACAAAAGTTGGGAAGCGAACCAGACAAACTTCCCTTCACTTTTTTAAGGAAAATAAAGAAACAAATGTTGAGTAG 849 41.22 MDLSNIARKLDLSNSKTLIRKAGEFYRLSDLHFNSSVIGVGEVCKAIICLEIAATRLGILFDRSSAIKLSGMSEKAYTRSFNFLQNCLGFKSRLDIRELAVKFGCVRLVASVQKGLSLYEDRFVASLPASRQASADFSRSVFTAVAFYLCAKKHKLKVDKVKLIELGGTSESEFSCVATSMKDLCFDVFGISSEKKDPRETKGNRDLLDALPEKRKLEDGGYLSDDWQRVSKIKTTQANEQAYNQWKSSVIASNNLTKTKVGKRTRQTSLHFFKENKETNVE 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11739571 11744585 - Tan0022754.2 Tan08g0895 760787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0895 282 Gene3D - 91 188 - -
Tan08g0895 282 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 1 264 IPR020529 GO:0005664(PANTHER)|GO:0005664(InterPro)|GO:0006260(InterPro)|GO:0006270(PANTHER)
Tan08g0895 282 CDD Orc6_mid 92 188 - -
Tan08g0895 282 Pfam Origin recognition complex subunit 6 (ORC6) 3 91 IPR008721 GO:0003677(InterPro)|GO:0005664(InterPro)|GO:0006260(InterPro)
Tan08g0895 282 Pfam ORC6 second cyclin-like domain 94 184 IPR054113 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0893 Tan-Chr8:11736484 Tan08g0895 Tan-Chr8:11739571 1.00E-156 dispersed
Tan08g0894 Tan-Chr8:11736484 Tan08g0895 Tan-Chr8:11739571 1.30E-116 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0895 K02608 - csv:101204841 453.366