Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan08g0905 | ATGAGTTCATTCAAGGGCTCTCCGTACGGACGACGGACTGATGTTGAGTCCGGTAGTAACAATTCCGGCGAGACGGAGGAGGAGGAATCATCTAATCCTTTCGAAATTCCCAGAACTAAGAATGCTTCTGTTGACAGACTCCGCCGCTGGAGACAAGCTGCGCTAGTGTTAAATGCTTCTCGTCGATTTCGGTATACTTTAGACTTGAAAAAGGAAGAAGAAAAGAAAGAAGCTTTGAGAAAGATTAGAGCACATGCACAAGCCATACGAGCTGCATATCTCTTTAAAGAGGCTGGGGATCGTCTAATAGGTCCAGGACCTGTGCCAGCAGATGCTCCAAATGGTGATTTTTCTGTTGGGCAAGATCAACTGGCTGTGTTGGTAAAGGATCGTAATGTTGAAGTTCTGGAGCAATATGGAGGGGTTAAAGGGGTAGCAGATATGTTACAATCAAATTTAGAGAAGGGGATAATTGGTGATGATTCTGATTTACTGAAACGGAGAAACACATATGGTTCAAACACATATCCTCAGAAACCAGGAAGGAGTTTTTGGAGGTTTCTCTGGGAAGCTTGGCAAGATCTTACATTGATCATATTGATGATAGCTGCTGTTGCTTCGTTGGTGCTAGGCATAAAGACTGAGGGTATCAAGGAAGGCTGGTATGATGGTGGAAGCATTGCTTTTGCAGTTATTCTTGTCATTGTTGTAACAGCTATAAGTGACTACCGACAATCTCTTCAATTTCAGAACTTGAATAAGGAAAAGAGGAACATACAAGTGGAGGTCGTTAGAGGTGGTCGTCGGATTGAGGTCTCAATTTATGAGATTGTTGTTGGTGATGTTATACCACTCAATATTGGTGATCAGGTCCCTGCTGATGGCATCTTAATTTCTGGACACTCACTTGCTATTGATGAATCAAGCATGACTGGAGAGAGCAAGATTGTTCAAAAACATGCTAAGGAACCTTTCCTGATGTCTGGATGCAAGGTAGCTGATGGTAGTGGCACCATGCTGGTTACAAGTGTTGGAGTTAATACTGAATGGGGTTTGCTTATGGCAAGTATTTCTGAAGACAATGGCGAGGAAACTCCTTTGCAGGTGCGCTTAAATGGTGTGGCAACTTTAATTGGTATTGTTGGACTTACAGTAGCTTTTGCTGTCTTGATTGTGCTCCTCACGAGGTATTTCACTGGTCACACCAAAAATCCAGATGGAAGCCGTCAGTTTATTGCAGGCCAGACAAAAGTTGGTCGTGCCGTTGATGGGGCCATCAAAATTGTCACTATTGCAGTGACCATCGTTGTGGTTGCTGTGCCTGAAGGGCTTCCACTAGCCGTAACCTTAACTCTTGCTTACTCAATGAGAAAGATGATGGCAGACAAGGCACTGGTGCGGAGGCTATCAGCATGTGAGACGATGGGGTCTGCTACAACTATTTGCAGTGATAAGACTGGAACCTTAACTATAAATCAGATGACCATTGTTGAAGCTTATGTTGGTGGGAAGAAGACTGATCCGCCAGAGAAGAAGTCAGAGTCGGCTTCCATGTTATACTCCATACTTGTTGAAGGCATTGCTCTGAACTCAAATGGCAGTGTATATGTGCCTGAGAGTGGTGGAGAGGCAGAGGTTACAGGATCACCTACGGAAAAGGCTATTCTTAATTGGGGTATCAAGCTGGGAATGAACTTTGAAGCAATTAGAACAGAATCTGCAATTCTTCATGTTTTCCCCTTCAGCTCAGATAAAAAACGTGGTGGTGTTGCAGGTCAACGGGATAATCAAGTCCATATACATTGGAAAGGTGCTGCTGAGATCGTCTTAGCATCATGCACACAGTACATTGATGAGCATGATCATTCTGTCCCACTAGGTGAAGATAAGATGAAGTATTTCAAGAGAGCTATTGAGGATATGGCTTCGCGTAGTTTACGTTGTGTTGCAATTGCGTATAGATCTTTTGATCCTGAGAATGTTCCTGACGGCGAAGAACAATTGAGTAAGTGGGCTCTACCAGAAGACGACCTTGTTTTGTTGGCTATAGTTGGTTTAAAGGACCCCTGTCGACCAGGAGTAAGAGATGCAGTACGACTTTGTCAAAAAGCTGGCGTTAAGGTACGCATGGTCACTGGTGATAATGTCCAAACAGCTAGAGCTATTGCATTAGAATGTGGAATACTTGGTTCAGATTCAGATGCTACCGAACCAAATCTTATTGAAGGAAAAACATTCCGTGCCCTATCTGATTCCCAAAGAGAAGAAGTTGCTGAGAAAATATCAGTGATGGGTCGGTCCTCTCCCAATGACAAGCTTCTCCTTGTGCAAGCATTGAGAAAGAGAGGACATGTAGTTGCTGTTACTGGAGATGGTACAAATGATGCTCCTGCATTACATGAGGCAGATATTGGTCTTGCAATGGGTATTCAGGGGACAGAAGTTGCCAAAGAAAGCTCAGATATTATTATTTTAGATGACAACTTTGCTTCAGTTGTGAAGGTTGTAAGGTGGGGCCGATCAGTATATGCAAATATTCAGAAATTCATCCAGTTTCAGCTCACTGTTAATGTTGCAGCACTCATCATCAATGTCGTGGCAGCAGTATCCTCTGGCGATGTCCCTCTAAATGCTGTGCAGCTATTGTGGGTTAATCTTATTATGGACACTCTTGGAGCATTAGCTTTGGCTACTGAACCACCAACCAATCACCTCATGGACAGGTCACCAGTTGGTAGAAGAGAACCTCTTATAACAAATATCATGTGGAGGAACCTGCTGATACAGGCATTTTATCAAGTCACCGTGTTGCTTGTCCTCAACTTTCGTGGTCGAAGTTTGCTTCATTTGAACCACTCTCATGTAGAAGTTAACAAAGTGAAGAATACGTTGATTTTCAATGCATTTGTGCTTTGCCAAATTTTCAATGAATTTAATGCTCGAAAACCTGATGAGAAGAATATATTCAAAGGAGTCACTAAAAATTACCTCTTTATTGGGATCATTGGGATTACTGTCGTCCTCCAGGTGATAATAATCGAGTTTCTTGGGAAATTCACGTCCACAGTCCGACTTAATTGGAAATATTGGATTATTTCCATAATCATTGGCGTTATTAGTTGGCCTCTAGCTCTAATTGGGAAATTCATACCTGTTCCTGAAACTCCCTTCCATGTGTAA | 3180 | 42.77 | MSSFKGSPYGRRTDVESGSNNSGETEEEESSNPFEIPRTKNASVDRLRRWRQAALVLNASRRFRYTLDLKKEEEKKEALRKIRAHAQAIRAAYLFKEAGDRLIGPGPVPADAPNGDFSVGQDQLAVLVKDRNVEVLEQYGGVKGVADMLQSNLEKGIIGDDSDLLKRRNTYGSNTYPQKPGRSFWRFLWEAWQDLTLIILMIAAVASLVLGIKTEGIKEGWYDGGSIAFAVILVIVVTAISDYRQSLQFQNLNKEKRNIQVEVVRGGRRIEVSIYEIVVGDVIPLNIGDQVPADGILISGHSLAIDESSMTGESKIVQKHAKEPFLMSGCKVADGSGTMLVTSVGVNTEWGLLMASISEDNGEETPLQVRLNGVATLIGIVGLTVAFAVLIVLLTRYFTGHTKNPDGSRQFIAGQTKVGRAVDGAIKIVTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTINQMTIVEAYVGGKKTDPPEKKSESASMLYSILVEGIALNSNGSVYVPESGGEAEVTGSPTEKAILNWGIKLGMNFEAIRTESAILHVFPFSSDKKRGGVAGQRDNQVHIHWKGAAEIVLASCTQYIDEHDHSVPLGEDKMKYFKRAIEDMASRSLRCVAIAYRSFDPENVPDGEEQLSKWALPEDDLVLLAIVGLKDPCRPGVRDAVRLCQKAGVKVRMVTGDNVQTARAIALECGILGSDSDATEPNLIEGKTFRALSDSQREEVAEKISVMGRSSPNDKLLLVQALRKRGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTNHLMDRSPVGRREPLITNIMWRNLLIQAFYQVTVLLVLNFRGRSLLHLNHSHVEVNKVKNTLIFNAFVLCQIFNEFNARKPDEKNIFKGVTKNYLFIGIIGITVVLQVIIIEFLGKFTSTVRLNWKYWIISIIIGVISWPLALIGKFIPVPETPFHV | 1059 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 12498995 | 12527146 | + | Tan0004869.1 | Tan08g0905 | 760797 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan08g0905 | 1059 | PANTHER | CATION TRANSPORTING ATPASE | 91 | 1052 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) | |
| Tan08g0905 | 1059 | Gene3D | - | 42 | 98 | - | - | |
| Tan08g0905 | 1059 | FunFam | Calcium-transporting ATPase | 190 | 247 | - | - | |
| Tan08g0905 | 1059 | Pfam | E1-E2 ATPase | 259 | 460 | - | - | |
| Tan08g0905 | 1059 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
| Tan08g0905 | 1059 | SMART | Cation_ATPase_N_a_2 | 138 | 212 | IPR004014 | - | |
| Tan08g0905 | 1059 | FunFam | Calcium-transporting ATPase | 806 | 1054 | - | - | |
| Tan08g0905 | 1059 | PRINTS | Sodium/potassium-transporting ATPase signature | 600 | 618 | - | - | |
| Tan08g0905 | 1059 | PRINTS | Sodium/potassium-transporting ATPase signature | 225 | 245 | - | - | |
| Tan08g0905 | 1059 | PRINTS | Sodium/potassium-transporting ATPase signature | 475 | 496 | - | - | |
| Tan08g0905 | 1059 | Pfam | haloacid dehalogenase-like hydrolase | 480 | 803 | - | - | |
| Tan08g0905 | 1059 | NCBIfam | HAD-IC family P-type ATPase | 227 | 399 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan08g0905 | 1059 | NCBIfam | HAD-IC family P-type ATPase | 422 | 510 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan08g0905 | 1059 | NCBIfam | HAD-IC family P-type ATPase | 755 | 869 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Tan08g0905 | 1059 | SUPERFAMILY | Calcium ATPase, transduction domain A | 259 | 355 | IPR008250 | - | |
| Tan08g0905 | 1059 | Pfam | Cation transporting ATPase, C-terminus | 874 | 1050 | IPR006068 | - | |
| Tan08g0905 | 1059 | Pfam | Cation transporter/ATPase, N-terminus | 139 | 207 | IPR004014 | - | |
| Tan08g0905 | 1059 | FunFam | Calcium-transporting ATPase | 683 | 834 | - | - | |
| Tan08g0905 | 1059 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 132 | 1052 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
| Tan08g0905 | 1059 | CDD | P-type_ATPase_Ca_PMCA-like | 164 | 922 | - | - | |
| Tan08g0905 | 1059 | PRINTS | P-type cation-transporting ATPase superfamily signature | 682 | 693 | - | - | |
| Tan08g0905 | 1059 | PRINTS | P-type cation-transporting ATPase superfamily signature | 789 | 808 | - | - | |
| Tan08g0905 | 1059 | PRINTS | P-type cation-transporting ATPase superfamily signature | 482 | 496 | - | - | |
| Tan08g0905 | 1059 | PRINTS | P-type cation-transporting ATPase superfamily signature | 813 | 825 | - | - | |
| Tan08g0905 | 1059 | PRINTS | P-type cation-transporting ATPase superfamily signature | 704 | 714 | - | - | |
| Tan08g0905 | 1059 | PRINTS | P-type cation-transporting ATPase superfamily signature | 306 | 320 | - | - | |
| Tan08g0905 | 1059 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 139 | 1052 | IPR023298 | - | |
| Tan08g0905 | 1059 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 31 | 74 | IPR024750 | GO:0005516(InterPro) | |
| Tan08g0905 | 1059 | SUPERFAMILY | HAD-like | 480 | 894 | IPR036412 | - | |
| Tan08g0905 | 1059 | Gene3D | - | 492 | 689 | IPR023299 | GO:0000166(InterPro) | |
| Tan08g0905 | 1059 | Gene3D | - | 479 | 834 | IPR023214 | - | |
| Tan08g0905 | 1059 | FunFam | Calcium-transporting ATPase | 42 | 98 | - | - | |
| Tan08g0905 | 1059 | FunFam | Calcium-transporting ATPase | 237 | 358 | - | - | |
| Tan08g0905 | 1059 | Gene3D | - | 164 | 358 | - | - | |
| Tan08g0905 | 1059 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Tan08g0905 | 1059 | SFLD | C1.7: P-type atpase like | 464 | 841 | - | - | |
| Tan08g0905 | 1059 | Coils | Coil | 69 | 89 | - | - | |
| Tan08g0905 | 1059 | SFLD | p-type atpase | 464 | 841 | IPR044492 | - | |
| Tan08g0905 | 1059 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 489 | 686 | IPR023299 | GO:0000166(InterPro) | |
| Tan08g0905 | 1059 | FunFam | Calcium-transporting ATPase 9 plasma membrane-type | 336 | 506 | - | - | |
| Tan08g0905 | 1059 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 484 | 490 | IPR018303 | - | |
| Tan08g0905 | 1059 | Gene3D | - | 190 | 1045 | - | - | |
| Tan08g0905 | 1059 | FunFam | Calcium-transporting ATPase | 492 | 689 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan06g0036 | Tan-Chr6:593835 | Tan08g0905 | Tan-Chr8:12498995 | 0.00E+00 | dispersed | |
| Tan06g0037 | Tan-Chr6:593835 | Tan08g0905 | Tan-Chr8:12498995 | 0.00E+00 | dispersed | |
| Tan08g0432 | Tan-Chr8:4135405 | Tan08g0905 | Tan-Chr8:12498995 | 1.20E-284 | dispersed | |
| Tan08g0905 | Tan-Chr8:12498995 | Tan10g1637 | Tan-Chr10:31065507 | 2.30E-262 | dispersed | |
| Tan08g0905 | Tan-Chr8:12498995 | Tan01g4694 | Tan-Chr1:112877771 | 2.40E-259 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan08g0905 | K01537 | - | csv:101211703 | 1886.31 |