Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0905 ATGAGTTCATTCAAGGGCTCTCCGTACGGACGACGGACTGATGTTGAGTCCGGTAGTAACAATTCCGGCGAGACGGAGGAGGAGGAATCATCTAATCCTTTCGAAATTCCCAGAACTAAGAATGCTTCTGTTGACAGACTCCGCCGCTGGAGACAAGCTGCGCTAGTGTTAAATGCTTCTCGTCGATTTCGGTATACTTTAGACTTGAAAAAGGAAGAAGAAAAGAAAGAAGCTTTGAGAAAGATTAGAGCACATGCACAAGCCATACGAGCTGCATATCTCTTTAAAGAGGCTGGGGATCGTCTAATAGGTCCAGGACCTGTGCCAGCAGATGCTCCAAATGGTGATTTTTCTGTTGGGCAAGATCAACTGGCTGTGTTGGTAAAGGATCGTAATGTTGAAGTTCTGGAGCAATATGGAGGGGTTAAAGGGGTAGCAGATATGTTACAATCAAATTTAGAGAAGGGGATAATTGGTGATGATTCTGATTTACTGAAACGGAGAAACACATATGGTTCAAACACATATCCTCAGAAACCAGGAAGGAGTTTTTGGAGGTTTCTCTGGGAAGCTTGGCAAGATCTTACATTGATCATATTGATGATAGCTGCTGTTGCTTCGTTGGTGCTAGGCATAAAGACTGAGGGTATCAAGGAAGGCTGGTATGATGGTGGAAGCATTGCTTTTGCAGTTATTCTTGTCATTGTTGTAACAGCTATAAGTGACTACCGACAATCTCTTCAATTTCAGAACTTGAATAAGGAAAAGAGGAACATACAAGTGGAGGTCGTTAGAGGTGGTCGTCGGATTGAGGTCTCAATTTATGAGATTGTTGTTGGTGATGTTATACCACTCAATATTGGTGATCAGGTCCCTGCTGATGGCATCTTAATTTCTGGACACTCACTTGCTATTGATGAATCAAGCATGACTGGAGAGAGCAAGATTGTTCAAAAACATGCTAAGGAACCTTTCCTGATGTCTGGATGCAAGGTAGCTGATGGTAGTGGCACCATGCTGGTTACAAGTGTTGGAGTTAATACTGAATGGGGTTTGCTTATGGCAAGTATTTCTGAAGACAATGGCGAGGAAACTCCTTTGCAGGTGCGCTTAAATGGTGTGGCAACTTTAATTGGTATTGTTGGACTTACAGTAGCTTTTGCTGTCTTGATTGTGCTCCTCACGAGGTATTTCACTGGTCACACCAAAAATCCAGATGGAAGCCGTCAGTTTATTGCAGGCCAGACAAAAGTTGGTCGTGCCGTTGATGGGGCCATCAAAATTGTCACTATTGCAGTGACCATCGTTGTGGTTGCTGTGCCTGAAGGGCTTCCACTAGCCGTAACCTTAACTCTTGCTTACTCAATGAGAAAGATGATGGCAGACAAGGCACTGGTGCGGAGGCTATCAGCATGTGAGACGATGGGGTCTGCTACAACTATTTGCAGTGATAAGACTGGAACCTTAACTATAAATCAGATGACCATTGTTGAAGCTTATGTTGGTGGGAAGAAGACTGATCCGCCAGAGAAGAAGTCAGAGTCGGCTTCCATGTTATACTCCATACTTGTTGAAGGCATTGCTCTGAACTCAAATGGCAGTGTATATGTGCCTGAGAGTGGTGGAGAGGCAGAGGTTACAGGATCACCTACGGAAAAGGCTATTCTTAATTGGGGTATCAAGCTGGGAATGAACTTTGAAGCAATTAGAACAGAATCTGCAATTCTTCATGTTTTCCCCTTCAGCTCAGATAAAAAACGTGGTGGTGTTGCAGGTCAACGGGATAATCAAGTCCATATACATTGGAAAGGTGCTGCTGAGATCGTCTTAGCATCATGCACACAGTACATTGATGAGCATGATCATTCTGTCCCACTAGGTGAAGATAAGATGAAGTATTTCAAGAGAGCTATTGAGGATATGGCTTCGCGTAGTTTACGTTGTGTTGCAATTGCGTATAGATCTTTTGATCCTGAGAATGTTCCTGACGGCGAAGAACAATTGAGTAAGTGGGCTCTACCAGAAGACGACCTTGTTTTGTTGGCTATAGTTGGTTTAAAGGACCCCTGTCGACCAGGAGTAAGAGATGCAGTACGACTTTGTCAAAAAGCTGGCGTTAAGGTACGCATGGTCACTGGTGATAATGTCCAAACAGCTAGAGCTATTGCATTAGAATGTGGAATACTTGGTTCAGATTCAGATGCTACCGAACCAAATCTTATTGAAGGAAAAACATTCCGTGCCCTATCTGATTCCCAAAGAGAAGAAGTTGCTGAGAAAATATCAGTGATGGGTCGGTCCTCTCCCAATGACAAGCTTCTCCTTGTGCAAGCATTGAGAAAGAGAGGACATGTAGTTGCTGTTACTGGAGATGGTACAAATGATGCTCCTGCATTACATGAGGCAGATATTGGTCTTGCAATGGGTATTCAGGGGACAGAAGTTGCCAAAGAAAGCTCAGATATTATTATTTTAGATGACAACTTTGCTTCAGTTGTGAAGGTTGTAAGGTGGGGCCGATCAGTATATGCAAATATTCAGAAATTCATCCAGTTTCAGCTCACTGTTAATGTTGCAGCACTCATCATCAATGTCGTGGCAGCAGTATCCTCTGGCGATGTCCCTCTAAATGCTGTGCAGCTATTGTGGGTTAATCTTATTATGGACACTCTTGGAGCATTAGCTTTGGCTACTGAACCACCAACCAATCACCTCATGGACAGGTCACCAGTTGGTAGAAGAGAACCTCTTATAACAAATATCATGTGGAGGAACCTGCTGATACAGGCATTTTATCAAGTCACCGTGTTGCTTGTCCTCAACTTTCGTGGTCGAAGTTTGCTTCATTTGAACCACTCTCATGTAGAAGTTAACAAAGTGAAGAATACGTTGATTTTCAATGCATTTGTGCTTTGCCAAATTTTCAATGAATTTAATGCTCGAAAACCTGATGAGAAGAATATATTCAAAGGAGTCACTAAAAATTACCTCTTTATTGGGATCATTGGGATTACTGTCGTCCTCCAGGTGATAATAATCGAGTTTCTTGGGAAATTCACGTCCACAGTCCGACTTAATTGGAAATATTGGATTATTTCCATAATCATTGGCGTTATTAGTTGGCCTCTAGCTCTAATTGGGAAATTCATACCTGTTCCTGAAACTCCCTTCCATGTGTAA 3180 42.77 MSSFKGSPYGRRTDVESGSNNSGETEEEESSNPFEIPRTKNASVDRLRRWRQAALVLNASRRFRYTLDLKKEEEKKEALRKIRAHAQAIRAAYLFKEAGDRLIGPGPVPADAPNGDFSVGQDQLAVLVKDRNVEVLEQYGGVKGVADMLQSNLEKGIIGDDSDLLKRRNTYGSNTYPQKPGRSFWRFLWEAWQDLTLIILMIAAVASLVLGIKTEGIKEGWYDGGSIAFAVILVIVVTAISDYRQSLQFQNLNKEKRNIQVEVVRGGRRIEVSIYEIVVGDVIPLNIGDQVPADGILISGHSLAIDESSMTGESKIVQKHAKEPFLMSGCKVADGSGTMLVTSVGVNTEWGLLMASISEDNGEETPLQVRLNGVATLIGIVGLTVAFAVLIVLLTRYFTGHTKNPDGSRQFIAGQTKVGRAVDGAIKIVTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTINQMTIVEAYVGGKKTDPPEKKSESASMLYSILVEGIALNSNGSVYVPESGGEAEVTGSPTEKAILNWGIKLGMNFEAIRTESAILHVFPFSSDKKRGGVAGQRDNQVHIHWKGAAEIVLASCTQYIDEHDHSVPLGEDKMKYFKRAIEDMASRSLRCVAIAYRSFDPENVPDGEEQLSKWALPEDDLVLLAIVGLKDPCRPGVRDAVRLCQKAGVKVRMVTGDNVQTARAIALECGILGSDSDATEPNLIEGKTFRALSDSQREEVAEKISVMGRSSPNDKLLLVQALRKRGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTNHLMDRSPVGRREPLITNIMWRNLLIQAFYQVTVLLVLNFRGRSLLHLNHSHVEVNKVKNTLIFNAFVLCQIFNEFNARKPDEKNIFKGVTKNYLFIGIIGITVVLQVIIIEFLGKFTSTVRLNWKYWIISIIIGVISWPLALIGKFIPVPETPFHV 1059
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 12498995 12527146 + Tan0004869.1 Tan08g0905 760797
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0905 1059 PANTHER CATION TRANSPORTING ATPASE 91 1052 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Tan08g0905 1059 Gene3D - 42 98 - -
Tan08g0905 1059 FunFam Calcium-transporting ATPase 190 247 - -
Tan08g0905 1059 Pfam E1-E2 ATPase 259 460 - -
Tan08g0905 1059 MobiDBLite consensus disorder prediction 1 39 - -
Tan08g0905 1059 SMART Cation_ATPase_N_a_2 138 212 IPR004014 -
Tan08g0905 1059 FunFam Calcium-transporting ATPase 806 1054 - -
Tan08g0905 1059 PRINTS Sodium/potassium-transporting ATPase signature 600 618 - -
Tan08g0905 1059 PRINTS Sodium/potassium-transporting ATPase signature 225 245 - -
Tan08g0905 1059 PRINTS Sodium/potassium-transporting ATPase signature 475 496 - -
Tan08g0905 1059 Pfam haloacid dehalogenase-like hydrolase 480 803 - -
Tan08g0905 1059 NCBIfam HAD-IC family P-type ATPase 227 399 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan08g0905 1059 NCBIfam HAD-IC family P-type ATPase 422 510 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan08g0905 1059 NCBIfam HAD-IC family P-type ATPase 755 869 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Tan08g0905 1059 SUPERFAMILY Calcium ATPase, transduction domain A 259 355 IPR008250 -
Tan08g0905 1059 Pfam Cation transporting ATPase, C-terminus 874 1050 IPR006068 -
Tan08g0905 1059 Pfam Cation transporter/ATPase, N-terminus 139 207 IPR004014 -
Tan08g0905 1059 FunFam Calcium-transporting ATPase 683 834 - -
Tan08g0905 1059 NCBIfam calcium-translocating P-type ATPase, PMCA-type 132 1052 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Tan08g0905 1059 CDD P-type_ATPase_Ca_PMCA-like 164 922 - -
Tan08g0905 1059 PRINTS P-type cation-transporting ATPase superfamily signature 682 693 - -
Tan08g0905 1059 PRINTS P-type cation-transporting ATPase superfamily signature 789 808 - -
Tan08g0905 1059 PRINTS P-type cation-transporting ATPase superfamily signature 482 496 - -
Tan08g0905 1059 PRINTS P-type cation-transporting ATPase superfamily signature 813 825 - -
Tan08g0905 1059 PRINTS P-type cation-transporting ATPase superfamily signature 704 714 - -
Tan08g0905 1059 PRINTS P-type cation-transporting ATPase superfamily signature 306 320 - -
Tan08g0905 1059 SUPERFAMILY Calcium ATPase, transmembrane domain M 139 1052 IPR023298 -
Tan08g0905 1059 Pfam Ca2+-ATPase N terminal autoinhibitory domain 31 74 IPR024750 GO:0005516(InterPro)
Tan08g0905 1059 SUPERFAMILY HAD-like 480 894 IPR036412 -
Tan08g0905 1059 Gene3D - 492 689 IPR023299 GO:0000166(InterPro)
Tan08g0905 1059 Gene3D - 479 834 IPR023214 -
Tan08g0905 1059 FunFam Calcium-transporting ATPase 42 98 - -
Tan08g0905 1059 FunFam Calcium-transporting ATPase 237 358 - -
Tan08g0905 1059 Gene3D - 164 358 - -
Tan08g0905 1059 MobiDBLite consensus disorder prediction 1 27 - -
Tan08g0905 1059 SFLD C1.7: P-type atpase like 464 841 - -
Tan08g0905 1059 Coils Coil 69 89 - -
Tan08g0905 1059 SFLD p-type atpase 464 841 IPR044492 -
Tan08g0905 1059 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 489 686 IPR023299 GO:0000166(InterPro)
Tan08g0905 1059 FunFam Calcium-transporting ATPase 9 plasma membrane-type 336 506 - -
Tan08g0905 1059 ProSitePatterns E1-E2 ATPases phosphorylation site. 484 490 IPR018303 -
Tan08g0905 1059 Gene3D - 190 1045 - -
Tan08g0905 1059 FunFam Calcium-transporting ATPase 492 689 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan06g0036 Tan-Chr6:593835 Tan08g0905 Tan-Chr8:12498995 0.00E+00 dispersed
Tan06g0037 Tan-Chr6:593835 Tan08g0905 Tan-Chr8:12498995 0.00E+00 dispersed
Tan08g0432 Tan-Chr8:4135405 Tan08g0905 Tan-Chr8:12498995 1.20E-284 dispersed
Tan08g0905 Tan-Chr8:12498995 Tan10g1637 Tan-Chr10:31065507 2.30E-262 dispersed
Tan08g0905 Tan-Chr8:12498995 Tan01g4694 Tan-Chr1:112877771 2.40E-259 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0905 K01537 - csv:101211703 1886.31