Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0917 ATGGCTTGCTCTGTAACAAAATCTAGTGCTTTCTTTTTTCTCTCTTCAATGCTTCTTGTTTCTCTTTTTACTAAGTTCATATTGCCCATGTCTCCAATTGCTTTTGGACTCACCATTTTACTTGTTCCTTTCCTTACTTACATCATCTCTTCCATGGCCTTCTCTTCCAAGCTTCCTCCTGGCCCTCTCTCCATCCCCATCTTTGGCAATTGGCTCCAAGTTGGCAATGACCTCAACCATCGCCTTCTTGCTTCCTTGTGTAAGAGATTCGGCTCGATCTTCCTCTTGAAGCTTGGCTCCAAGAACCTCGTTGTCGTGTCTGATGCTGAGCTTGCTAGCCAAGTTCTCCATGCTCAGGGTGTAGAGTTTGGGTCTCGTCCTCGGAATGTCGTGTTTGATATCTTCGCTGGAAATGGTCAGGATATGGTTTTCACAGTTTATGGAGATCATTGGCGTAAGATGCGTAGAATCATGACATTGCCGTTTTTCACAAACAAGGTGGTGCACAACTATAGTGGGATGTGGGAGGACGAGATGGACTCCGTGGTTCATGACCTTAAGAGTAACAAGAAGTTTCAATCGGAAGGGATTGTTATAAGAAAGCGTTTGCAACTGATGTTGTACAACATCATGTATAGAATGATGTTTGATGCAAAGTTTGAGTCCCAAGAGGATCCTTTGTTCATCGAAGCAACTCGGTTTAATTCAGAAAGGAGTCGATTGGCACAAAGCTTTGAATACAACTATGGAGATTTCATTCCTTTGCTCAGACCCTTATTGAGAGGTTACTTAAACAAGTGTAGAGATTTACAAAGTAGAAGGTTGGACTTTTTCAACCAGAATTATGTTGAGAAAAGAAGAAGGATAATGGCTACCAATGGAGATAAGCACAAGATAACGTGCGCTATGGATCATATCATAGACGCTCAATTGAAAGGTGAGATTAGTGAAGAGAATGTGATTTACATTGTGGAGAACATCAACGTAGCAGCAATAGAAACAACACTATGGTCGATGGAATGGGCGATAGCTGAGCTGGTGAATCATCCTGACATCCAACGAAAAATTCGAGAGGAGCTAAACAACGTCCTTAAAGGAAAGGAAGTGACTGAATCTAACCTTCATGAACTTCCATACTTACAAGCAACCGTGAAAGAAACACTAAGATTGCACACTCCAATACCATTGTTGGTGCCACACATGAACTTGGAAGAGGCAAAGCTTGGAGGGTACACCATTCCAAAGGAATCCAAAGTGGTGGTGAATGCATGGTGGCTAGCGAACAATCCCGAGTGGTGGAAAAATCCAGAAGAGTTTAGGCCAGAGAGATTCTTTGAAGAAGAAACTGGCACAGAAGCTGTTGCTGCAGGAAAGGTAGATTACCGATTCTTACCATTTGGAGTTGGAAGAAGGAGTTGCCCTGGACTTGTTCTGGCAATGCCAATCTTAGGGCTTATCGTTGCCAAATTGGTTTCAAAGTTTGAAATGAAGCCTCCTAGTGGAATGGAGAAGATCGATGTCACCGAGAAAGGAGGACAATTCAGTCTACATATCGCCAACCACTCAACAGTTGTTTTTGATCCTATAATTGCTTAA 1596 42.61 MACSVTKSSAFFFLSSMLLVSLFTKFILPMSPIAFGLTILLVPFLTYIISSMAFSSKLPPGPLSIPIFGNWLQVGNDLNHRLLASLCKRFGSIFLLKLGSKNLVVVSDAELASQVLHAQGVEFGSRPRNVVFDIFAGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSGMWEDEMDSVVHDLKSNKKFQSEGIVIRKRLQLMLYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPLLRGYLNKCRDLQSRRLDFFNQNYVEKRRRIMATNGDKHKITCAMDHIIDAQLKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPDIQRKIREELNNVLKGKEVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPEWWKNPEEFRPERFFEEETGTEAVAAGKVDYRFLPFGVGRRSCPGLVLAMPILGLIVAKLVSKFEMKPPSGMEKIDVTEKGGQFSLHIANHSTVVFDPIIA 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 12964404 12966126 - Tan0016128.1 Tan08g0917 760809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0917 531 FunFam Trans-cinnamate 4-monooxygenase 49 523 - -
Tan08g0917 531 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g0917 531 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g0917 531 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g0917 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Tan08g0917 531 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 43 529 - GO:0004497(PANTHER)
Tan08g0917 531 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g0917 531 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g0917 531 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g0917 531 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g0917 531 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g0917 531 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g0917 531 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g0917 531 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g0917 531 PRINTS E-class P450 group I signature 111 132 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g0917 531 Pfam Cytochrome P450 59 520 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g0917 531 SUPERFAMILY Cytochrome P450 59 511 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan08g0917 531 Gene3D Cytochrome P450 52 523 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0914 Tan-Chr8:12941784 Tan08g0917 Tan-Chr8:12964404 4.40E-254 dispersed
Tan08g0915 Tan-Chr8:12952245 Tan08g0917 Tan-Chr8:12964404 2.20E-127 dispersed
Tan08g0917 Tan-Chr8:12964404 Tan08g2442 Tan-Chr8:75602093 7.60E-182 dispersed
Tan08g0916 Tan-Chr8:12958310 Tan08g0917 Tan-Chr8:12964404 8.40E-290 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0917 K00487 - csv:101204747 966.452