Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0941 ATGTTGGAGGGTGGCCAAAAATTCACTGGAATGATCGATTTAAACGAACATGCATATGATCTATCGCAAGGGTTTTACCATAAACTTGGTGAGGGAACCAACATGTCTATTGACAGCTTTGCAAGCTTGCAAACGAGCAACGATGGAGGGTCTGTTGCCATGTCTTTAGATAACAGCAGTGTCGGATCAAATGAATCTCACACTCGGATCTTAAATCACCAAGGCTTGCGACGGCGTGCAAATGATAACCATACTTTCCAACATAGTGTTAACCGTCGTGGAAGAGTTACACATCACCTGAGTGATGATGCACTAGCCCGAGCTTTATTTGATAGTAATACACCCACCCAGGGTCTCGAAAATTTTGAGAAGTGGACTCTTGATTTAAGGAAACTTAATATGGGGGAGGCTTTTGCTCAAGGTGCCTTTGGAAAACTCTACAGAGGTACTTATGATGGCGAAGATGTTGCTATTAAGATCTTGGAGAGGCCGGAGAATGACCTGGAAAAGGCTCAGTTAATGGAGCAACAATATCAGCAGGAGGTGATGATGCTTGCTACTCTGAAGCACCCAAATATTGTCCGGTTTATTGGATCATGTCATAAGCCGATGGTTTGGTGCATTGTTACTGAATATGCCAAGGGTGGTTCAGTTAGGCAGTTCTTAATGAAGCGACAAAGTCGCTCTGTCCCCCTGAAATTAGCTGTCAAACAAGCTTTGGATGTTGCCAGGGGGATGGAATATGTTCATGGCCTTGGGTTGATTCACAGGGACTTGAAATCAGACAACCTTTTGATTTTTGCAGATAAGTCTATCAAGGTTGCTGACTTTGGAGTGGCCCGGATCGAGGTGCAGACAGAGGGAATGACACCCGAGACTGGAACCTACCGCTGGATGGCACCGGAGATGATCCAACACAGGCCATACACCCAAAAGGTGGACTTGTATAGCTTTGGCATCGTTCTCTGGGAGCTGATAACTGGAATGCTTCCATTCCAGAACATGACAGCCGTTCAGGCCGCCTTTGCAGTTGTTAACAAGGGAGTCCGTCCTATCATTCCCAATGATTGCTTACCTGTTTTGAGCGACATCATGACCCGGTGCTGGGATGCCAACCCAGATGTCAGGCCATCGTTTACCGAGGTGGTCAGAATGCTCGAGAATGCACAGACTGAGATCATGACGACCGTGCGTAAGGCTCGTTTCAGGTGTTGCATGACACAGCCGATGACAACAGACTGA 1242 46.7 MLEGGQKFTGMIDLNEHAYDLSQGFYHKLGEGTNMSIDSFASLQTSNDGGSVAMSLDNSSVGSNESHTRILNHQGLRRRANDNHTFQHSVNRRGRVTHHLSDDALARALFDSNTPTQGLENFEKWTLDLRKLNMGEAFAQGAFGKLYRGTYDGEDVAIKILERPENDLEKAQLMEQQYQQEVMMLATLKHPNIVRFIGSCHKPMVWCIVTEYAKGGSVRQFLMKRQSRSVPLKLAVKQALDVARGMEYVHGLGLIHRDLKSDNLLIFADKSIKVADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDLYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKGVRPIIPNDCLPVLSDIMTRCWDANPDVRPSFTEVVRMLENAQTEIMTTVRKARFRCCMTQPMTTD 413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13611319 13619853 - Tan0013418.1 Tan08g0941 760833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0941 413 Gene3D Transferase(Phosphotransferase) domain 1 215 410 - -
Tan08g0941 413 FunFam Serine/threonine-protein kinase isoform 1 122 214 - -
Tan08g0941 413 SMART serkin_6 132 394 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0941 413 Pfam Protein tyrosine and serine/threonine kinase 133 386 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0941 413 PRINTS Tyrosine kinase catalytic domain signature 210 223 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0941 413 PRINTS Tyrosine kinase catalytic domain signature 357 379 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0941 413 PRINTS Tyrosine kinase catalytic domain signature 248 266 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0941 413 PRINTS Tyrosine kinase catalytic domain signature 313 335 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0941 413 PRINTS Tyrosine kinase catalytic domain signature 294 304 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0941 413 ProSiteProfiles Protein kinase domain profile. 132 393 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0941 413 CDD STKc_MAP3K-like 139 386 - -
Tan08g0941 413 Gene3D Phosphorylase Kinase; domain 1 121 214 - -
Tan08g0941 413 FunFam serine/threonine-protein kinase HT1 215 408 - -
Tan08g0941 413 SUPERFAMILY Protein kinase-like (PK-like) 117 386 IPR011009 -
Tan08g0941 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0941 413 PANTHER SERINE-THREONINE PROTEIN KINASE 75 388 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan05g3305 Tan-Chr5:84958429 Tan08g0941 Tan-Chr8:13611319 4.00E-76 dispersed
Tan08g0941 Tan-Chr8:13611319 Tan11g1153 Tan-Chr11:9196209 2.60E-68 dispersed
Tan08g0941 Tan-Chr8:13611319 Tan08g0942 Tan-Chr8:13611319 2.10E-171 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67943 PF07714 PK_Tyr_Ser-Thr 2.90E-65 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0941 - - - 0.0