Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g0942 ATGTTGGAGGGTGGCCAAAAATTCACTGGAATGATCGATTTAAACGAACATGCATATGATCTATCGCAAGGGTTTTACCATAAACTTGGTGAGGGAACCAACATGTCTATTGACAGCTTTGCAAGCTTGCAAACGAGCAACGATGGAGGGTCTGTTGCCATGTCTTTAGATAACAGCAGTGTCGGATCAAATGAATCTCACACTCGGATCTTAAATCACCAAGGCTTGCGACGGCGTGCAAATGATAACCATACTTTCCAACATAGTGTTAACCGTCGTGGAAGAGTTACACATCACCTGAGTGATGATGCACTAGCCCGAGCTTTATTTGATAGTAATACACCCACCCAGGGTCTCGAAAATTTTGAGAAGTGGACTCTTGATTTAAGGAAACTTAATATGGGGGAGGCTTTTGCTCAAGGTGCCTTTGGAAAACTCTACAGAGGTACTTATGATGGCGAAGATGTTGCTATTAAGATCTTGGAGAGGCCGGAGAATGACCTGGAAAAGGCTCAGTTAATGGAGCAACAATATCAGCAGGAGGTGATGATGCTTGCTACTCTGAAGCACCCAAATATTGTCCGGTTTATTGGATCATGTCATAAGCCGATGGTTTGGTGCATTGTTACTGAATATGCCAAGGGTGGTTCAGTTAGGCAGTTCTTAATGAAGCGACAAAGTCGCTCTGTCCCCCTGAAATTAGCTGTCAAACAAGCTTTGGATGTTGCCAGGGGGATGGAATATGTTCATGGCCTTGGGTTGATTCACAGGGACTTGAAATCAGACAACCTTTTGATTTTTGCAGATAAGTCTATCAAGGTTGCTGACTTTGGAGTGGCCCGGATCGAGGTGCAGACAGAGGGAATGACACCCGAGACTGGAACCTACCGCTGGATGGCACCCTTTGTTATGATTTAG 918 44.77 MLEGGQKFTGMIDLNEHAYDLSQGFYHKLGEGTNMSIDSFASLQTSNDGGSVAMSLDNSSVGSNESHTRILNHQGLRRRANDNHTFQHSVNRRGRVTHHLSDDALARALFDSNTPTQGLENFEKWTLDLRKLNMGEAFAQGAFGKLYRGTYDGEDVAIKILERPENDLEKAQLMEQQYQQEVMMLATLKHPNIVRFIGSCHKPMVWCIVTEYAKGGSVRQFLMKRQSRSVPLKLAVKQALDVARGMEYVHGLGLIHRDLKSDNLLIFADKSIKVADFGVARIEVQTEGMTPETGTYRWMAPFVMI 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13611319 13619853 - Tan0013418.2 Tan08g0942 760834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g0942 305 Pfam Protein kinase domain 140 301 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0942 305 Gene3D Phosphorylase Kinase; domain 1 121 213 - -
Tan08g0942 305 Gene3D Transferase(Phosphotransferase) domain 1 214 304 - -
Tan08g0942 305 ProSiteProfiles Protein kinase domain profile. 132 305 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0942 305 SUPERFAMILY Protein kinase-like (PK-like) 120 301 IPR011009 -
Tan08g0942 305 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan08g0942 305 SMART serkin_6 132 305 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan08g0942 305 FunFam Serine/threonine-protein kinase isoform 1 122 214 - -
Tan08g0942 305 PANTHER SERINE-THREONINE PROTEIN KINASE 75 302 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan08g0942 Tan-Chr8:13611319 Tan09g2306 Tan-Chr9:72970771 2.90E-40 dispersed
Tan08g0941 Tan-Chr8:13611319 Tan08g0942 Tan-Chr8:13611319 2.10E-171 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67944 PF07714 PK_Tyr_Ser-Thr 3.40E-37 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g0942 - - - 0.0