Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan08g1092 ATGGGCGTCGTGGGAGGCACTCAAACGCAGTCTGCAAATCCGAACATGGGAAGTGAAAAGCCGAAGGTGGTGGTGATTATGGGGCCGACCGGTTCTGGGAAGTCCCGTCTCGCCATCGATTTGGCTTCTCACTTCCCCCTCGAGATCATCAACGCCGATTCTATGCAGGTTTATCGCGGATTGGACGTTCTCACAAACAAGGTTCCTCCCGAAGACCAAAATGGAGTACCGCATCATCTTTTAGGTACAGTGAGTCCAGACGTTGAATTCACGGCTAAAGACTTCCGAGATTCTGCCATTCCTGTTATTGATGACATATTCTCACGTGGGTGCTTGCCAATGATAGTGGGTGGAACGAATTATTATATACAGGCTCTTGTTAGCCCATTTCTTCTGGATGACTCTGCTGAAAAGGTTAGCGGAAGTTGCTCCAGTTATCTTGGAGATGAGGAACTGGGTATTGAGTTGGATGAGGGAAGAGATGGATTGAAGTATGACCATAACCATCTTAAAGAGATTGATCCAGTTTCGGCTGACAGACTCCATCCTAATAACCACAGAAAAATAAATCAATACCTGAATTTGTATTACCGCACTGGTGTTCTTCCCAGCACACTTTTTCAAGGAAAGGCTGCTGAGAATTGGGGTCAAGCTTATAGTTTCAGATACGATTGCTGCTTGGTATGTGTAGATGCTTCTGTTCCACAACTTGACGGACATGTTGATTCTAGAGTTGATAGCATGTTGGCTGCTGGATTACTTGATGAGGTCTATGATATTTACAATCCAAATGCAAACTATACTAGAGGATTGCGTCAAGCTATTGGTGTTCGGGAGTTTGAAGAGTTTTTGAGGTATTATGTACCTAAAGGTAGATGTGACAAAGATAGTGGTGGGCTTAGTCCAAAAAATTCAAGGGAGGAGTGTAATGAGATTTTGAAAGAGAATATGAGGTCCATCCTACATTCACCAAGTGATGGACGATCCAGTTTGCTACTGAAAGAAGCCATAGATAATGTCAAGTTGAATACTAAAAGACTGGTTCGTCGTCAGAGGAGGCAGCTAAAGAGACTGGAAACCTTGTTTGGATGGAAGATCCACTATGTTGATTCCACTGAATATATAACACGCAAAGTGGAGGATTCATGGACTGCCCAAGTCGTTGAACCTGCAGTCCAGATAATTAGGTCTTTCCTTGAAGATAGTTGTTCTGCGACTGAGACAATGAACCCACATAATTCTGGGCAAGTAATCAAAAAGGACTTGTGGACACAATATATTTGCCAGGCTTGTGGGAATAAAGTACTAAGAGGAGCACATGAATGGGAACAACACCATCAAGGTCGTACACATCGAAAGCGAATGTATCGGCTTAAGAAGAAATGTGAAGGACTTTCCTTACTGCAACAGAAACTACCTCAAGAGTAA 1428 43.42 MGVVGGTQTQSANPNMGSEKPKVVVIMGPTGSGKSRLAIDLASHFPLEIINADSMQVYRGLDVLTNKVPPEDQNGVPHHLLGTVSPDVEFTAKDFRDSAIPVIDDIFSRGCLPMIVGGTNYYIQALVSPFLLDDSAEKVSGSCSSYLGDEELGIELDEGRDGLKYDHNHLKEIDPVSADRLHPNNHRKINQYLNLYYRTGVLPSTLFQGKAAENWGQAYSFRYDCCLVCVDASVPQLDGHVDSRVDSMLAAGLLDEVYDIYNPNANYTRGLRQAIGVREFEEFLRYYVPKGRCDKDSGGLSPKNSREECNEILKENMRSILHSPSDGRSSLLLKEAIDNVKLNTKRLVRRQRRQLKRLETLFGWKIHYVDSTEYITRKVEDSWTAQVVEPAVQIIRSFLEDSCSATETMNPHNSGQVIKKDLWTQYICQACGNKVLRGAHEWEQHHQGRTHRKRMYRLKKKCEGLSLLQQKLPQE 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 21143014 21184395 + Tan0000714.1 Tan08g1092 760984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan08g1092 475 Gene3D Classic Zinc Finger 424 464 - -
Tan08g1092 475 MobiDBLite consensus disorder prediction 1 20 - -
Tan08g1092 475 FunFam tRNA dimethylallyltransferase 421 463 - -
Tan08g1092 475 MobiDBLite consensus disorder prediction 1 17 - -
Tan08g1092 475 Gene3D - 149 210 - -
Tan08g1092 475 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 22 411 IPR039657 GO:0005739(PANTHER)|GO:0006400(PANTHER)|GO:0052381(PANTHER)
Tan08g1092 475 Hamap tRNA dimethylallyltransferase [miaA]. 23 400 IPR018022 GO:0008033(InterPro)|GO:0052381(InterPro)
Tan08g1092 475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 129 IPR027417 -
Tan08g1092 475 Pfam IPP transferase 56 356 - -
Tan08g1092 475 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 23 285 IPR018022 GO:0008033(InterPro)|GO:0052381(InterPro)
Tan08g1092 475 Gene3D - 21 423 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0864 Tan-Chr1:8301786 Tan08g1092 Tan-Chr8:21143014 1.10E-20 dispersed
Tan08g1092 Tan-Chr8:21143014 Tan11g1864 Tan-Chr11:23580691 1.50E-48 dispersed
Tan08g1092 Tan-Chr8:21143014 Tan06g2568 Tan-Chr6:78361699 2.10E-50 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan08g1092 K00791 - csv:101202758 814.683